https://github.com/xiaoli-dong/pathogenseq
Pathogen whole genome sequence (WGS) data analysis pipeline
amr
assembly
capsular-typing
emm-typing
illumina
mlst
nanopore
ngs
pathogen
plasmid
serotyping
taxonomy
virulome
Added: over 1 year ago - Last Synced: 11 months ago
- Created: June 28, 2023
- Relevant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
- Main Language: Nextflow
- Commits: 151
- Committers: 5
- Issues: 1
- Pull Requests: 0
- Owner: xiaoli-dong
- Stars: 2
- Forks: 1
- Packages: 0
https://github.com/grahambates/uae-dap
Debug Adapter Protocol for Amiga development with FS-UAE or WinUAE
68000
amiga
asm
assembly
commodore
dap
debug
fs-uae
m68k
win-uae
Added: over 1 year ago - Last Synced: 11 months ago
- Created: May 12, 2022
- Relevant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
- Main Language: TypeScript
- Commits: 149
- Committers: 1
- Issues: 2
- Pull Requests: 1
- Owner: grahambates
- Stars: 8
- Forks: 1
- Packages: 1
- Downloads: 27
https://github.com/dereneaton/ipyrad
Interactive assembly and analysis of RAD-seq data sets
assembly
genomics
phylogeny
rad-seq
Added: over 1 year ago - Last Synced: 11 months ago
- Created: October 07, 2015
- Relevant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
- Main Language: Jupyter Notebook
- Commits: 3925
- Committers: 28
- Issues: 149
- Pull Requests: 7
- Owner: dereneaton
- Stars: 70
- Forks: 39
- Packages: 2
https://github.com/Gabaldonlab/redundans
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
assembled-contigs
assembly
bioinformatics
closing
contigs
docker-image
fasta
gap
genome-assembly
genomics
heterozygous
mate-pairs
paired-end
pipeline
polymorphic
python
scaffolding
Added: over 1 year ago - Last Synced: 11 months ago
- Created: April 07, 2015
- Relevant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
- Main Language: C++
- Commits: 560
- Committers: 12
- Issues: 102
- Pull Requests: 6
- Owner: Gabaldonlab
- Stars: 123
- Forks: 19
- Packages: 1
https://github.com/RRZE-HPC/likwid
Performance monitoring and benchmarking suite
armv8
assembly
benchmarking
c
hardware-performance-counters
hwloc
instrumentation
likwid
linux
lua
nvidia-gpu
performance-analysis
performance-engineering
pin
power9
profiling
threading
x86
Added: over 1 year ago - Last Synced: 11 months ago
- Created: May 04, 2015
