https://github.com/xiaoli-dong/pathogenseq
Pathogen whole genome sequence (WGS) data analysis pipeline
amr
assembly
capsular-typing
emm-typing
illumina
mlst
nanopore
ngs
pathogen
plasmid
serotyping
taxonomy
virulome
Added: over 1 year ago - Last Synced: 11 months ago
- Created: June 28, 2023
- Relevant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
- Main Language: Nextflow
- Commits: 151
- Committers: 5
- Issues: 1
- Pull Requests: 0
- Owner: xiaoli-dong
- Stars: 2
- Forks: 1
- Packages: 0
