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https://github.com/vijaybarve/taxotools

Tools to Handle Taxonomic Lists
package r taxonomy
Added: 11 months ago - Last Synced: 11 months ago - Created: August 29, 2018

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: R
  • Commits: 148
  • Committers: 2
  • Issues: 101
  • Pull Requests: 0
  • Owner: vijaybarve
  • Stars: 5
  • Forks: 1
  • Packages: 1
  • Downloads: 286
https://github.com/xiaoli-dong/pathogenseq

Pathogen whole genome sequence (WGS) data analysis pipeline
amr assembly capsular-typing emm-typing illumina mlst nanopore ngs pathogen plasmid serotyping taxonomy virulome
Added: over 1 year ago - Last Synced: 11 months ago - Created: June 28, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
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  • Fork? false
  • Main Language: Nextflow
  • Commits: 151
  • Committers: 5
  • Issues: 1
  • Pull Requests: 0
https://github.com/unipept/umgap

A taxonomic classifier for shotgun metagenomics reads
metagenomics taxonomy
Added: over 1 year ago - Last Synced: 11 months ago - Created: January 01, 2017

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Rust
  • Commits: 592
  • Committers: 15
  • Issues: 5
  • Pull Requests: 2
  • Owner: unipept
  • Stars: 10
  • Forks: 6
  • Packages: 1
  • Downloads: 1,876