Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

https://github.com/maxall41/rustsasa

RustSASA: A Rust Crate for Accelerated Solvent Accessible Surface Area Calculations - Published in JOSS (2026)
bioinformatics biology rust
Added: 5 months ago - Last Synced: 5 months ago - Created: February 09, 2024

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Rust
  • Commits: 287
  • Committers: 5
  • Issues: 4
  • Pull Requests: 25
  • Owner: maxall41
  • Stars: 16
  • Forks: 6
  • Packages: 1
  • Downloads: 13,187
https://github.com/mbhall88/rasusa

Rasusa: Randomly subsample sequencing reads to a specified coverage - Published in JOSS (2022)
alignment bam bioinformatics coverage downsample fasta fastq genome-analysis random rust subsampling
Added: 8 months ago - Last Synced: 8 months ago - Created: September 26, 2019

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Rust
  • Commits: 273
  • Committers: 7
  • Issues: 43
  • Pull Requests: 65
  • Owner: mbhall88
  • Stars: 244
  • Forks: 20
  • Packages: 1
  • Downloads: 18,864
https://github.com/sourmash-bio/sourmash

sourmash v4: A multitool to quickly search, compare, and analyze genomic and metagenomic data sets - Published in JOSS (2024)
bioinformatics fracminhash hacktoberfest kmer minhash python rust scaled-minhash sketching sourmash taxonomic-classification taxonomic-profiling
Added: 8 months ago - Last Synced: 8 months ago - Created: April 09, 2016

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 2136
  • Committers: 47
  • Issues: 607
  • Pull Requests: 1251
  • Owner: sourmash-bio
  • Stars: 524
  • Forks: 88
  • Packages: 4
  • Downloads: 56,689