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Open Sustainable Technology

https://github.com/althonos/pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.
bioinformatics cython-library cython-wrapper genomics needleman-wunsch python-bindings python-library sequence-alignment simd smith-waterman
Added: 11 months ago - Last Synced: 11 months ago - Created: October 04, 2022

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 64
  • Committers: 1
  • Issues: 6
  • Pull Requests: 1
  • Owner: althonos
  • Stars: 7
  • Forks: 1
  • Packages: 1
  • Downloads: 3,127
https://github.com/althonos/pyfamsa

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.
bioinformatics cython-library genomics multiple-sequence-alignment python-bindings python-library sequence-alignment
Added: 11 months ago - Last Synced: 11 months ago - Created: July 28, 2022

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 83
  • Committers: 1
  • Issues: 4
  • Pull Requests: 0
  • Owner: althonos
  • Stars: 21
  • Forks: 3
  • Packages: 1
  • Downloads: 1,606