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Open Sustainable Technology

https://github.com/althonos/pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.
bioinformatics cython-library cython-wrapper genomics needleman-wunsch python-bindings python-library sequence-alignment simd smith-waterman
Added: 11 months ago - Last Synced: 11 months ago - Created: October 04, 2022

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 64
  • Committers: 1
  • Issues: 6
  • Pull Requests: 1
  • Owner: althonos
  • Stars: 7
  • Forks: 1
  • Packages: 1
  • Downloads: 3,127
https://github.com/althonos/lightmotif

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
bioinformatics genomics pssm rust-library sequence-analysis sequence-motif simd
Added: 11 months ago - Last Synced: 11 months ago - Created: April 30, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Rust
  • Commits:
  • Committers:
  • Issues: 0
  • Pull Requests: 4
  • Owner: althonos
  • Stars: 36
  • Forks: 2
  • Packages: 6
  • Downloads: 13,920
https://github.com/luke-beep/corefusion-benchmark

CoreFusion Benchmark is a CPU benchmarking utility designed to assess the performance of CPUs through advanced SIMD (Single Instruction, Multiple Data) operations.
benchmark benchmarking cpu csharp simd
Added: over 1 year ago - Last Synced: 11 months ago - Created: November 26, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: C#
  • Commits: 10
  • Committers: 1
  • Issues: 0
  • Pull Requests: 1
  • Owner: luke-beep
  • Stars: 1
  • Forks: 0
  • Packages: 0