Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

https://github.com/juliasilge/tidytext

tidytext: Text Mining and Analysis Using Tidy Data Principles in R - Published in JOSS (2016)
natural-language-processing r text-mining tidy-data tidyverse
Added: 2 months ago - Last Synced: 2 months ago - Created: March 31, 2016

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  • Main Language: R
  • Commits: 716
  • Committers: 33
  • Issues: 93
  • Pull Requests: 21
  • Owner: juliasilge
  • Stars: 1196
  • Forks: 182
  • Packages: 3
  • Downloads: 68,363
https://github.com/mlr-org/batchtools

batchtools: Tools for R to work on batch systems - Published in JOSS (2017)
batchexperiments batchjobs cran docker-swarm high-performance-computing hpc hpc-clusters lsf openlava parallel-computing r reproducibility sge slurm torque
Added: 2 months ago - Last Synced: 2 months ago - Created: October 26, 2015

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  • Main Language: R
  • Commits: 935
  • Committers: 18
  • Issues: 84
  • Pull Requests: 35
  • Owner: mlr-org
  • Stars: 183
  • Forks: 52
  • Packages: 1
  • Downloads: 10,816
https://github.com/ropensci/visdat

visdat: Visualising Whole Data Frames - Published in JOSS (2017)
exploratory-data-analysis missingness peer-reviewed r r-package ropensci rstats visualisation
Added: 2 months ago - Last Synced: 2 months ago - Created: January 28, 2016

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  • Main Language: R
  • Commits: 476
  • Committers: 19
  • Issues: 80
  • Pull Requests: 27
  • Owner: ropensci
  • Stars: 459
  • Forks: 46
  • Packages: 3
  • Downloads: 33,967
https://github.com/ropensci/usaboundaries

USAboundaries: Historical and Contemporary Boundaries of the United States of America - Published in JOSS (2018)
digital-history history r r-package rstats spatial-data
Added: 2 months ago - Last Synced: 2 months ago - Created: October 09, 2014

  • Relevant topics? true
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  • Main Language: R
  • Commits: 216
  • Committers: 8
  • Issues: 44
  • Pull Requests: 8
  • Owner: ropensci
  • Stars: 64
  • Forks: 10
  • Packages: 3
https://github.com/terrytangyuan/autoplotly

autoplotly: An R package for automatic generation of interactive visualizations for statistical results - Published in JOSS (2018)
data-visualization ggplot2 interactive-visualizations machine-learning plotly plotlyjs rstats statistics
Added: 2 months ago - Last Synced: 2 months ago - Created: January 07, 2018

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  • Main Language: R
  • Commits: 62
  • Committers: 2
  • Issues: 5
  • Pull Requests: 2
  • Owner: terrytangyuan
  • Stars: 92
  • Forks: 11
  • Packages: 3
  • Downloads: 779
https://github.com/strengejacke/sjmisc

sjmisc: Data and Variable Transformation Functions - Published in JOSS (2018)
data-transformation data-wrangling labelled-data r recoding
Added: 2 months ago - Last Synced: 2 months ago - Created: March 21, 2015

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  • Main Language: R
  • Commits: 929
  • Committers: 13
  • Issues: 84
  • Pull Requests: 18
  • Owner: strengejacke
  • Stars: 161
  • Forks: 24
  • Packages: 2
  • Downloads: 46,244
https://github.com/ellessenne/rsimsum

rsimsum: Summarise results from Monte Carlo simulation studies - Published in JOSS (2018)
biostatistics monte-carlo-error r rstats simulation simulation-study simulations statistics
Added: 2 months ago - Last Synced: 2 months ago - Created: May 25, 2017

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  • Main Language: R
  • Commits: 606
  • Committers: 7
  • Issues: 42
  • Pull Requests: 17
  • Owner: ellessenne
  • Stars: 30
  • Forks: 7
  • Packages: 1
  • Downloads: 610
https://github.com/strengejacke/ggeffects

ggeffects: Tidy Data Frames of Marginal Effects from Regression Models - Published in JOSS (2018)
estimated-marginal-means hacktoberfest marginal-effects prediction
Added: 2 months ago - Last Synced: 2 months ago - Created: June 01, 2017

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  • Main Language: R
  • Commits: 1942
  • Committers: 13
  • Issues: 200
  • Pull Requests: 362
  • Owner: strengejacke
  • Stars: 602
  • Forks: 40
  • Packages: 2
  • Downloads: 51,141
https://github.com/uscbiostats/slurmr

slurmR: A lightweight wrapper for HPC with Slurm - Published in JOSS (2021)
bioinformatics hpc rpackage rstats slurm
Added: 2 months ago - Last Synced: 2 months ago - Created: August 24, 2018

  • Relevant topics? true
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  • Main Language: R
  • Commits: 275
  • Committers: 3
  • Issues: 42
  • Pull Requests: 6
  • Owner: USCbiostats
  • Stars: 60
  • Forks: 11
  • Packages: 1
  • Downloads: 575
https://github.com/ropensci/opentripplanner

OpenTripPlanner for R - Published in JOSS (2019)
data isochrones java opentripplanner otp public-transport r routing transport transportation-planning
Added: 2 months ago - Last Synced: 2 months ago - Created: October 19, 2018

  • Relevant topics? true
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  • Main Language: R
  • Commits: 603
  • Committers: 11
  • Issues: 81
  • Pull Requests: 38
  • Owner: ropensci
  • Stars: 86
  • Forks: 21
  • Packages: 1
  • Downloads: 1,488
https://github.com/ropensci/osfr

osfr: An R Interface to the Open Science Framework - Published in JOSS (2020)
open-science osf reproducible-research
Added: 2 months ago - Last Synced: 2 months ago - Created: September 11, 2015

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  • Main Language: R
  • Commits: 1003
  • Committers: 18
  • Issues: 69
  • Pull Requests: 37
  • Owner: ropensci
  • Stars: 151
  • Forks: 30
  • Packages: 2
  • Downloads: 2,104
https://github.com/stemangiola/tidyheatmap

tidyHeatmap: an R package for modular heatmap production based on tidy principles - Published in JOSS (2020)
brewer complexheatmap custom-palette dplyr graphviz heatmap mtcars plotting r rstudio scale tibble tidy tidy-data-frame tidybulk tidyverse viridis
Added: 2 months ago - Last Synced: 2 months ago - Created: January 13, 2020

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  • Main Language: R
  • Commits: 460
  • Committers: 10
  • Issues: 56
  • Pull Requests: 95
  • Owner: stemangiola
  • Stars: 347
  • Forks: 25
  • Packages: 3
  • Downloads: 1,422
https://github.com/easystats/parameters

Extracting, Computing and Exploring the Parameters of Statistical Models using R - Published in JOSS (2020)
beta bootstrap ci confidence-intervals data-reduction easystats fa feature-extraction feature-reduction hacktoberfest parameters pca pvalues r r-package regression-models robust-statistics standardize standardized-estimates statistical-models
Added: 2 months ago - Last Synced: 2 months ago - Created: February 09, 2019

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  • Main Language: R
  • Commits: 4967
  • Committers: 24
  • Issues: 144
  • Pull Requests: 356
  • Owner: easystats
  • Stars: 477
  • Forks: 40
  • Packages: 3
  • Downloads: 109,986
https://github.com/isoverse/isoreader

Isoreader: An R package to read stable isotope data files for reproducible research - Published in JOSS (2021)
data ecology geochemistry isotopes r
Added: 2 months ago - Last Synced: 2 months ago - Created: May 08, 2017

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  • Main Language: R
  • Commits: 815
  • Committers: 3
  • Issues: 55
  • Pull Requests: 47
  • Owner: isoverse
  • Stars: 11
  • Forks: 5
  • Packages: 0
https://github.com/mlr-org/mcboost

mcboost: Multi-Calibration Boosting for R - Published in JOSS (2021)
bias-correction bias-detection classification ethics fairness fairness-ai fairness-ml machine-learning post-processing responsible-ai
Added: 2 months ago - Last Synced: 2 months ago - Created: December 28, 2020

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  • Main Language: R
  • Commits: 298
  • Committers: 8
  • Issues: 38
  • Pull Requests: 8
  • Owner: mlr-org
  • Stars: 33
  • Forks: 4
  • Packages: 1
  • Downloads: 325
https://github.com/jessecambon/tidygeocoder

tidygeocoder: An R package for geocoding - Published in JOSS (2021)
geocoding r rspatial rstats tidyverse
Added: 2 months ago - Last Synced: 2 months ago - Created: September 19, 2019

  • Relevant topics? true
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  • Main Language: R
  • Commits: 666
  • Committers: 9
  • Issues: 52
  • Pull Requests: 60
  • Owner: jessecambon
  • Stars: 295
  • Forks: 21
  • Packages: 3
  • Downloads: 13,950
https://github.com/mrc-ide/individual

individual: An R package for individual-based epidemiological models - Published in JOSS (2021)
agent-based-modeling epidemiology individual-based-modelling infectious-diseases r r-package rstats
Added: 2 months ago - Last Synced: 2 months ago - Created: December 17, 2019

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  • Main Language: R
  • Commits: 499
  • Committers: 7
  • Issues: 30
  • Pull Requests: 71
  • Owner: mrc-ide
  • Stars: 30
  • Forks: 17
  • Packages: 1
https://github.com/r-spatialecology/shar

shar: An R package to analyze species-habitat associations using point pattern analysis - Published in JOSS (2021)
habitat-association landscape-ecology point-pattern-analysis spatial-analysis
Added: 2 months ago - Last Synced: 2 months ago - Created: January 22, 2018

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  • Main Language: R
  • Commits: 625
  • Committers: 9
  • Issues: 50
  • Pull Requests: 71
https://github.com/ropensci/terrainr

terrainr: An R package for creating immersive virtual environments - Published in JOSS (2022)
cran datasets dems map map-tiles mapping national-map nhd orthoimagery peer-reviewed progressr r r-package retrieve-data rstats terrainr unity unity-rendering-engine usgs
Added: 2 months ago - Last Synced: 2 months ago - Created: September 08, 2020

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  • Main Language: R
  • Commits: 366
  • Committers: 3
  • Issues: 47
  • Pull Requests: 25
  • Owner: ropensci
  • Stars: 74
  • Forks: 9
  • Packages: 1
  • Downloads: 719
https://github.com/rhenkin/visxhclust

visxhclust: An R Shiny package for visual exploration of hierarchical clustering - Published in JOSS (2022)
clustering data-analysis data-science r r-package r-shiny rstats shiny-apps
Added: 2 months ago - Last Synced: 2 months ago - Created: March 17, 2021

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  • Main Language: R
  • Commits: 35
  • Committers: 2
  • Issues: 4
  • Pull Requests: 12
  • Owner: rhenkin
  • Stars: 4
  • Forks: 0
  • Packages: 1
  • Downloads: 240
https://github.com/jhollist/nsink

nsink: An R package for flow path nitrogen removal estimation - Published in JOSS (2022)
eutrophication nitrogen ord rstats sf terra water
Added: 2 months ago - Last Synced: 2 months ago - Created: April 01, 2021

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  • Main Language: R
  • Commits: 322
  • Committers: 3
  • Issues: 18
  • Pull Requests: 9
  • Owner: jhollist
  • Stars: 5
  • Forks: 4
  • Packages: 0
https://github.com/schochastics/netrankr

netrankr: An R package for total, partial, and probabilistic rankings in networks - Published in JOSS (2022)
network-analysis network-centrality r-package
Added: 2 months ago - Last Synced: 2 months ago - Created: May 09, 2017

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  • Main Language: R
  • Commits: 478
  • Committers: 7
  • Issues: 20
  • Pull Requests: 14
  • Owner: schochastics
  • Stars: 49
  • Forks: 5
  • Packages: 2
  • Downloads: 7,833
https://github.com/riatelab/osrm

osrm: Interface Between R and the OpenStreetMap-Based Routing Service OSRM - Published in JOSS (2022)
cran openstreetmap osrm r r-package shortest-paths travel
Added: 2 months ago - Last Synced: 2 months ago - Created: September 11, 2015

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  • Main Language: R
  • Commits: 332
  • Committers: 10
  • Issues: 105
  • Pull Requests: 10
  • Owner: riatelab
  • Stars: 245
  • Forks: 34
  • Packages: 2
  • Downloads: 5,318
https://github.com/connordonegan/geostan

geostan: An R package for Bayesian spatial analysis - Published in JOSS (2022)
bayesian bayesian-inference bayesian-statistics epidemiology modeling public-health r r-package rspatial rstats spatial stan
Added: 2 months ago - Last Synced: 2 months ago - Created: March 18, 2020

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  • Main Language: R
  • Commits: 433
  • Committers: 4
  • Issues: 15
  • Pull Requests: 7
  • Owner: ConnorDonegan
  • Stars: 81
  • Forks: 6
  • Packages: 1
  • Downloads: 879
https://github.com/schochastics/signnet

signnet: An R package for analyzing signed networks - Published in JOSS (2023)
network-analysis signed-networks sna
Added: 2 months ago - Last Synced: 2 months ago - Created: August 14, 2019

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  • Main Language: R
  • Commits: 150
  • Committers: 3
  • Issues: 24
  • Pull Requests: 9
  • Owner: schochastics
  • Stars: 23
  • Forks: 7
  • Packages: 1
  • Downloads: 420
https://github.com/schochastics/graphlayouts

graphlayouts: Layout algorithms for network visualizations in R - Published in JOSS (2023)
ggraph graph-algorithms network-analysis network-visualization r
Added: 2 months ago - Last Synced: 2 months ago - Created: September 12, 2018

  • Relevant topics? true
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  • Main Language: R
  • Commits: 273
  • Committers: 6
  • Issues: 78
  • Pull Requests: 21
  • Owner: schochastics
  • Stars: 281
  • Forks: 17
  • Packages: 3
  • Downloads: 74,096
https://github.com/jeremygelb/geocmeans

geocmeans: An R package for spatial fuzzy c-means - Published in JOSS (2023)
clustering cmeans fuzzy-classification-algorithms r spatial-analysis spatial-fuzzy-cmeans unsupervised-learning
Added: 2 months ago - Last Synced: 2 months ago - Created: March 21, 2020

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  • Main Language: R
  • Commits: 173
  • Committers: 2
  • Issues: 8
  • Pull Requests: 0
  • Owner: JeremyGelb
  • Stars: 28
  • Forks: 2
  • Packages: 3
  • Downloads: 768
https://github.com/dieghernan/tidyterra

Using the tidyverse with terra objects: the tidyterra package - Published in JOSS (2023)
cran cran-r ggplot-extension r r-package r-spatial rspatial rstats rstats-package terra
Added: 2 months ago - Last Synced: 2 months ago - Created: May 03, 2022

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  • Main Language: R
  • Commits: 456
  • Committers: 8
  • Issues: 74
  • Pull Requests: 114
  • Owner: dieghernan
  • Stars: 206
  • Forks: 11
  • Packages: 2
  • Downloads: 19,633
https://github.com/jbferet/prospect

prospect: an R package to link leaf optical properties with their chemical and structural properties with the leaf model PROSPECT - Published in JOSS (2024)
leaf leaf-traits physical-modeling prospect spectroscopy
Added: 2 months ago - Last Synced: 2 months ago - Created: August 24, 2020

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  • Main Language: R
  • Commits: 192
  • Committers: 2
  • Issues: 11
  • Pull Requests: 1
  • Owner: jbferet
  • Stars: 19
  • Forks: 3
  • Packages: 0
https://github.com/gavinsimpson/gratia

gratia: An R package for exploring generalized additive models - Published in JOSS (2024)
distributional-regression gam gamm generalized-additive-mixed-models generalized-additive-models ggplot2 glm lm mgcv penalized-spline r r-package random-effects smoothing splines
Added: 2 months ago - Last Synced: 2 months ago - Created: August 16, 2018

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  • Main Language: R
  • Commits: 2820
  • Committers: 24
  • Issues: 227
  • Pull Requests: 4
  • Owner: gavinsimpson
  • Stars: 229
  • Forks: 33
  • Packages: 2
  • Downloads: 11,323