Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

https://github.com/mbhall88/tbpore

Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data
bioinformatics drug-resistance-prediction genomics mycobacterium-tuberculosis nanopore variant-calling
Added: over 1 year ago - Last Synced: about 1 year ago - Created: November 25, 2021

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 261
  • Committers: 4
  • Issues: 42
  • Pull Requests: 13
  • Owner: mbhall88
  • Stars: 11
  • Forks: 2
  • Packages: 1
  • Downloads: 75
https://github.com/hku-bal/clairs-to

ClairS-TO - a deep-learning method for tumor-only somatic variant calling
bioinformatics deep-learning genomics illumina long-read-sequencing long-reads nanopore ont pacbio snvs somatic-mutations somatic-variants tumor-only tumors variant-calling variants
Added: over 1 year ago - Last Synced: about 1 year ago - Created: November 07, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 76
  • Committers: 6
  • Issues: 1
  • Pull Requests: 2
  • Owner: HKU-BAL
  • Stars: 32
  • Forks: 2
  • Packages: 0