https://github.com/epigen/mixscape_seurat

A Snakemake workflow for performing perturbation analyses of pooled (multimodal) CRISPR screens with sc/snRNA-seq read-out (scCRISPR-seq) powered by the R package Seurat's method Mixscape.
bioinformatics biomedical-data-science perturbation-analysis sccrispr-seq scrna-seq single-cell snakemake snrna-seq visualization workflow
Added: over 1 year ago - Last Synced: 11 months ago - Created: April 14, 2022

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  • Main Language: R
  • Commits: 20
  • Committers: 2
  • Issues: 4
  • Pull Requests: 0
  • Owner: epigen
  • Stars: 2
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