https://github.com/trevorprater/pymorton

A lightweight and efficient Python Morton encoder with support for geo-hashing
bit-interleaving dimensionality-reduction geospatial-analysis hashing-algorithm image-processing latitude-and-longitude morton-code nearest-neighbors quadtree search-algorithm sorting-algorithms z-order
Added: over 1 year ago - Last Synced: 11 months ago - Created: December 17, 2015

  • Relevant topics? true
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  • Main Language: Python
  • Commits: 98
  • Committers: 5
  • Issues: 4
  • Pull Requests: 3
  • Owner: trevorprater
  • Stars: 104
  • Forks: 21
  • Packages: 1
  • Downloads: 7,491
https://github.com/epigen/spilterlize_integrate

A Snakemake workflow to split, filter, normalize, integrate and select highly variable features of count matrices resulting from experiments with sequencing readout (e.g., RNA-seq, ATAC-seq, ChIP-seq, Methyl-seq, miRNA-seq,...) including diagnostic visualizations.
atac-seq batch-effect bioinformatics biomedical-data-science chip-seq count-matrix dimensionality-reduction integration ngs normalization pipeline rna-seq snakemake visualization workflow
Added: over 1 year ago - Last Synced: 11 months ago - Created: June 28, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
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  • Main Language: Python
  • Commits: 22
  • Committers: 2
  • Issues: 7
  • Pull Requests: 0
  • Owner: epigen
  • Stars: 8
  • Forks: 0
  • Packages: 0