OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis
OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)
https://github.com/rikenbit/onlinepca.jl
Keywords
bioinformatics dimensionality-reduction julia out-of-core-processing pca sparse-matrix
Last synced: 13 days ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Online Principal Component Analysis
- Host: GitHub
- URL: https://github.com/rikenbit/onlinepca.jl
- Owner: rikenbit
- License: other
- Created: 2018-03-15T10:15:57.000Z (almost 8 years ago)
- Default Branch: master
- Last Pushed: 2025-12-03T14:12:17.000Z (2 months ago)
- Last Synced: 2025-12-04T17:47:05.750Z (2 months ago)
- Topics: bioinformatics, dimensionality-reduction, julia, out-of-core-processing, pca, sparse-matrix
- Language: Julia
- Homepage: https://rikenbit.github.io/OnlinePCA.jl/
- Size: 9.14 MB
- Stars: 24
- Watchers: 8
- Forks: 3
- Open Issues: 0
- Releases: 0
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE.md
- Code of conduct: CODE_OF_CONDUCT.md
Owner metadata
- Name: RIKEN BiT
- Login: rikenbit
- Email:
- Kind: organization
- Description: Laboratory for Bioinformatics Research, RIKEN Center for Biosystems Dynamics Research
- Website: https://bit.riken.jp/
- Location: Japan
- Twitter: dritoshien
- Company:
- Icon url: https://avatars.githubusercontent.com/u/7158513?v=4
- Repositories: 80
- Last ynced at: 2023-12-01T06:00:19.976Z
- Profile URL: https://github.com/rikenbit
GitHub Events
Total
- Release event: 13
- Delete event: 4
- Pull request event: 32
- Issues event: 6
- Watch event: 2
- Issue comment event: 8
- Push event: 59
- Create event: 30
Last Year
- Release event: 13
- Delete event: 4
- Pull request event: 32
- Issues event: 6
- Watch event: 1
- Issue comment event: 8
- Push event: 59
- Create event: 30
Committers metadata
Last synced: 3 months ago
Total Commits: 296
Total Committers: 5
Avg Commits per committer: 59.2
Development Distribution Score (DDS): 0.064
Commits in past year: 44
Committers in past year: 3
Avg Commits per committer in past year: 14.667
Development Distribution Score (DDS) in past year: 0.318
| Name | Commits | |
|---|---|---|
| kokitsuyuzaki | k****r@h****p | 277 |
| CompatHelper Julia | c****y@j****g | 11 |
| dependabot[bot] | 4****] | 3 |
| Russell Jarvis | r****s@p****m | 3 |
| Kenta Sato | b****5@g****m | 2 |
Committer domains:
- julialang.org: 1
- hotmail.co.jp: 1
Issue and Pull Request metadata
Last synced: 13 days ago
Total issues: 3
Total pull requests: 15
Average time to close issues: 33 minutes
Average time to close pull requests: 22 days
Total issue authors: 2
Total pull request authors: 2
Average comments per issue: 1.33
Average comments per pull request: 0.13
Merged pull request: 12
Bot issues: 0
Bot pull requests: 15
Past year issues: 3
Past year pull requests: 15
Past year average time to close issues: 33 minutes
Past year average time to close pull requests: 22 days
Past year issue authors: 2
Past year pull request authors: 2
Past year average comments per issue: 1.33
Past year average comments per pull request: 0.13
Past year merged pull request: 12
Past year bot issues: 0
Past year bot pull requests: 15
Top Issue Authors
- kokitsuyuzaki (2)
- JuliaTagBot (1)
Top Pull Request Authors
- github-actions[bot] (10)
- dependabot[bot] (5)
Top Issue Labels
Top Pull Request Labels
- dependencies (5)
- github_actions (5)
Package metadata
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
juliahub.com: OnlinePCA
Online Principal Component Analysis
- Homepage: https://rikenbit.github.io/OnlinePCA.jl/
- Documentation: https://docs.juliahub.com/General/OnlinePCA/stable/
- Licenses: MIT
- Latest release: 0.3.10 (published 8 months ago)
- Last Synced: 2026-01-21T14:55:25.869Z (21 days ago)
- Versions: 2
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 8.407%
- Average: 22.333%
- Dependent packages count: 36.259%
Dependencies
- actions/checkout v4 composite
- julia-actions/cache v2 composite
- julia-actions/julia-buildpkg v1 composite
- julia-actions/julia-runtest v1 composite
- julia-actions/setup-julia v2 composite
- JuliaRegistries/TagBot v1 composite
- actions/checkout v4 composite
- docker/build-push-action v6 composite
- docker/login-action v3 composite
- julia 1.8.0-rc1-buster build
- actions/checkout v3 composite
- julia-actions/setup-julia v1 composite
Score: -Infinity