Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

https://github.com/ncbo/bioportal_web_ui

A Rails application for biological ontologies
annotation bioinformatics bioportal metadata obo ontology-repository open-science open-source owl rdf ruby-on-rails semantic-web
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 27, 2012

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? true
  • Main Language: Ruby
  • Commits: 4438
  • Committers: 17
  • Issues: 63
  • Pull Requests: 47
  • Owner: ncbo
  • Stars: 20
  • Forks: 2
  • Packages: 0
https://github.com/evidenceontology/evidenceontology

Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cite ECO. Visit our website for more project info.
annotation evidence obo obofoundry ontology owl
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 03, 2015

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: HTML
  • Commits: 602
  • Committers: 22
  • Issues: 176
  • Pull Requests: 12
https://github.com/obofoundry/obofoundry.github.io

Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
annotation biocuration bioinformatics life-sciences metadata obo obofoundry ontology ontology-registry open-science open-source semantic-web
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 29, 2015

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 2928
  • Committers: 157
  • Issues: 43
  • Pull Requests: 66
  • Owner: OBOFoundry
  • Stars: 159
  • Forks: 199
  • Packages: 0
https://github.com/kili-technology/kili-python-sdk

Simplest and fastest image and text annotation tool.
annotation annotation-tool-offline annotation-tool-online bounding-box computer-vision-annotation-tool data-annotations document-annotation-tool image-annotation-tool image-labeling image-texte-video-classification labeling labeling-tool semantic-annotation semantic-segmentation text-annotation-tool text-labeling texte-video-classification video-classification
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 03, 2019

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Jupyter Notebook
  • Commits: 2204
  • Committers: 73
  • Issues: 5
  • Pull Requests: 480
https://github.com/mbsantiago/whombat

Audio Annotation Tool for ML development
annotation audio audio-annotation bioacoustics machine-learning
Added: over 1 year ago - Last Synced: about 1 year ago - Created: August 24, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 300
  • Committers: 1
  • Issues: 10
  • Pull Requests: 12
  • Owner: mbsantiago
  • Stars: 26
  • Forks: 3
  • Packages: 1
  • Downloads: 257
https://github.com/walzimmer/3d-bat

3D Bounding Box Annotation Tool (3D-BAT) Point cloud and Image Labeling
2d 3d 3d-object-detection active-learning annotation automatic autonomous-driving bounding-box detection interpolation javascript mechanical-turk multi-platform multi-view point-cloud pointcloud semi-automatic surround tool web
Added: over 1 year ago - Last Synced: about 1 year ago - Created: October 16, 2018

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: TypeScript
  • Commits: 30
  • Committers: 1
  • Issues: 31
  • Pull Requests: 16
  • Owner: walzimmer
  • Stars: 580
  • Forks: 138
  • Packages: 0
https://github.com/HumanSignal/label-studio

Label Studio is a multi-type data labeling and annotation tool with standardized output format
annotation annotation-tool annotations boundingbox computer-vision data-labeling dataset datasets deep-learning image-annotation image-classification image-labeling image-labelling-tool label-studio labeling labeling-tool mlops semantic-segmentation text-annotation yolo
Added: over 1 year ago - Last Synced: about 1 year ago - Created: June 19, 2019

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: JavaScript
  • Commits: 3307
  • Committers: 127
  • Issues: 306
  • Pull Requests: 587
  • Owner: HumanSignal
  • Stars: 16367
  • Forks: 2018
  • Packages: 0
https://github.com/WrightonLabCSU/DRAM

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
annotation bioinformatics genomics metagenome-assembled-genomes metagenomics microbiome viral-genomics viral-metagenomics
Added: over 1 year ago - Last Synced: about 1 year ago - Created: February 11, 2019

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 765
  • Committers: 18
  • Issues: 165
  • Pull Requests: 12
https://github.com/glarue/intronic

Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.
annotated-intron-sequences annotated-introns annotation bioinformatics classification genome intron intron-classification intron-sequences minor-intron python sequence-classification svm u12-type
Added: over 1 year ago - Last Synced: about 1 year ago - Created: May 25, 2020

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 173
  • Committers: 1
  • Issues: 3
  • Pull Requests: 1
  • Owner: glarue
  • Stars: 6
  • Forks: 0
  • Packages: 1
  • Downloads: 67