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Open Sustainable Technology

https://github.com/cokelaer/damona

singularity environment manager (application to NGS and bioinformatics)
bioinformatics conda manager ngs singularity
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 24, 2020

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 501
  • Committers: 3
  • Issues: 41
  • Pull Requests: 19
  • Owner: cokelaer
  • Stars: 5
  • Forks: 2
  • Packages: 1
  • Downloads: 146
https://github.com/openomics/ervx

Endogenous Retrovirus Expression Pipeline for Human and Mouse for use with bulk RNA
endogenous-retrovirus-expression herv human mouse pipeline quality-control singularity snakemake workflow
Added: over 1 year ago - Last Synced: about 1 year ago - Created: March 07, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 47
  • Committers: 2
  • Issues: 1
  • Pull Requests: 0
  • Owner: OpenOmics
  • Stars: 1
  • Forks: 1
  • Packages: 0
https://github.com/seqeralabs/wave-cli

Command line tool for Wave containers provisioning service
conda containers docker kubernetes singularity spack
Added: over 1 year ago - Last Synced: about 1 year ago - Created: June 03, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Java
  • Commits: 132
  • Committers: 5
  • Issues: 31
  • Pull Requests: 30
  • Owner: seqeralabs
  • Stars: 12
  • Forks: 3
  • Packages: 1