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Open Sustainable Technology

A curated list of open technology projects to sustain a stable climate, energy supply, biodiversity and natural resources.

RFishBC

Helps fisheries scientists collect measurements from calcified structures and back-calculate estimated lengths at previous ages.
https://github.com/fishr-core-team/rfishbc

Category: Biosphere
Sub Category: Marine Life and Fishery

Keywords

fish fisheries fisheries-management fisheries-stock-assessment population-dynamics r stock-assessment

Last synced: about 7 hours ago
JSON representation

Repository metadata

This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.

README.md

Project Status: Active – The project has reached a stable, usable state and is being actively developed.
DOI
CRAN Status
License
R-CMD-check
Codecov test coverage
CRAN RStudio mirror downloads rate
CRAN RSTudio mirror downloads total
Rdoc

RFishBC

The RFishBC package helps fisheries scientists collect measurements from calcified structures and back-calculate estimated lengths at previous ages. RFishBC is intended to replace much of the functionality provided by the now out-date fishBC software.

Use

General desriptions for using RFishBC are under the Vignettes tab at the top of this page. I suggest at least quickly reading each vignette to get an overall feel for RFishBC and then following the workflow suggestions in the last vignette. Detailed descriptions for each function are under the Reference tab at the top of that page.

Installation

The most recent stable version (on CRAN) of RFishBC may be installed with

install.packages("RFishBC")

The most recent development version may be installed from GitHub with

if (!require('remotes')) install.packages('remotes'); require('remotes')
remotes::install_github('fishr-core-team/RFishBC')

You may need to have R Tools installed on your system to use the two lines above. See the instructions for (R Tools for Windows or R Tools for Mac OS X). Additionally, you may need the X11 graphics functionality if using Mac OS.

Questions / Comments / Problems or Contributions

Report questions, comments, or bug reports on the issues page.

We are always looking for others to contribute to RFishBC. Please feel free to make a pull request via GitHub or to contact the maintainers.

Please adhere to the Code of Conduct.

Owner metadata

GitHub Events

Total
Last Year

Committers metadata

Last synced: 5 days ago

Total Commits: 271
Total Committers: 2
Avg Commits per committer: 135.5
Development Distribution Score (DDS): 0.225

Commits in past year: 11
Committers in past year: 1
Avg Commits per committer in past year: 11.0
Development Distribution Score (DDS) in past year: 0.0

Name Email Commits
Derek Ogle d****c 210
Derek Ogle d****e@n****u 61

Committer domains:

Issue and Pull Request metadata

Last synced: 1 day ago

Total issues: 43
Total pull requests: 21
Average time to close issues: 4 months
Average time to close pull requests: about 2 hours
Total issue authors: 5
Total pull request authors: 1
Average comments per issue: 1.4
Average comments per pull request: 0.48
Merged pull request: 20
Bot issues: 0
Bot pull requests: 0

Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/fishr-core-team/rfishbc

Top Issue Authors

  • droglenc (38)
  • adospace (2)
  • LBRUDNR (1)
  • smithmillerm (1)
  • Otoliths (1)

Top Pull Request Authors

  • droglenc (21)

Top Issue Labels

  • enhancement (26)
  • bug (6)
  • question (1)
  • help wanted (1)
  • testing needed (1)

Top Pull Request Labels

Package metadata

cran.r-project.org: RFishBC

Back-Calculation of Fish Length

  • Homepage: https://fishr-core-team.github.io/RFishBC/
  • Documentation: http://cran.r-project.org/web/packages/RFishBC/RFishBC.pdf
  • Licenses: GPL-3
  • Latest release: 0.2.7 (published over 1 year ago)
  • Last Synced: 2025-04-26T13:34:11.757Z (1 day ago)
  • Versions: 7
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 276 Last month
  • Rankings:
    • Stargazers count: 14.653%
    • Forks count: 21.266%
    • Average: 22.818%
    • Dependent repos count: 24.3%
    • Downloads: 26.02%
    • Dependent packages count: 27.852%
  • Maintainers (1)

Dependencies

.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v2 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
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  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.4.1 composite
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • R >= 3.2.0 depends
  • cli * imports
  • clisymbols * imports
  • crayon * imports
  • grDevices * imports
  • graphics * imports
  • readbitmap * imports
  • rlang * imports
  • settings * imports
  • stringr * imports
  • tidyr * imports
  • withr * imports
  • FSA * suggests
  • covr * suggests
  • pkgdown * suggests
  • testthat * suggests

Score: 9.211140052146746