https://github.com/snaketron/clustirr
Clustering of immune receptor repertoires
https://github.com/snaketron/clustirr
Keywords
b-cell-receptor bioinformatics clustering immunoinformatics immunology quantitative-methods rep-seq repertoire-analysis t-cell-receptor
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Clustering of immune receptor repertoires
- Host: GitHub
- URL: https://github.com/snaketron/clustirr
- Owner: snaketron
- License: gpl-3.0
- Created: 2023-03-09T21:30:18.000Z (about 2 years ago)
- Default Branch: main
- Last Pushed: 2024-04-17T22:10:12.000Z (about 1 year ago)
- Last Synced: 2024-05-18T00:21:35.428Z (12 months ago)
- Topics: b-cell-receptor, bioinformatics, clustering, immunoinformatics, immunology, quantitative-methods, rep-seq, repertoire-analysis, t-cell-receptor
- Language: R
- Homepage:
- Size: 39.2 MB
- Stars: 2
- Watchers: 2
- Forks: 0
- Open Issues: 1
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: snaketron
- Login: snaketron
- Email:
- Kind: user
- Description:
- Website: snaketron.github.io
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/5060977?u=80e15e0b00a1f70c5e9b449b0fbc2a023576d856&v=4
- Repositories: 25
- Last ynced at: 2023-08-03T10:42:52.360Z
- Profile URL: https://github.com/snaketron
GitHub Events
Total
- Commit comment event: 8
- Issues event: 22
- Issue comment event: 5
- Push event: 151
Last Year
- Commit comment event: 8
- Issue comment event: 5
- Issues event: 22
- Push event: 151
Committers metadata
Last synced: over 1 year ago
Total Commits: 347
Total Committers: 7
Avg Commits per committer: 49.571
Development Distribution Score (DDS): 0.392
Commits in past year: 347
Committers in past year: 7
Avg Commits per committer in past year: 49.571
Development Distribution Score (DDS) in past year: 0.392
| Name | Commits | |
|---|---|---|
| sktron | s****i@u****e | 211 |
| Kai Wollek | k****k@s****e | 124 |
| snaketron | s****n | 4 |
| Kai Wollek | k****k@w****e | 3 |
| J Wokaty | j****y@s****u | 2 |
| sktron-vm240 | s****i@g****m | 2 |
| kaozkai | 4****i | 1 |
Committer domains:
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 43
Total pull requests: 0
Average time to close issues: about 2 months
Average time to close pull requests: N/A
Total issue authors: 2
Total pull request authors: 0
Average comments per issue: 0.42
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 10
Past year pull requests: 0
Past year average time to close issues: about 2 months
Past year average time to close pull requests: N/A
Past year issue authors: 2
Past year pull request authors: 0
Past year average comments per issue: 0.6
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- kaozkai (27)
- snaketron (16)
Top Pull Request Authors
Top Issue Labels
- documentation (17)
- bioconductor guidelines (7)
- enhancement (6)
- benchmarking (6)
- implementation (5)
- question (4)
- submission process (3)
- bug (3)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- bioconductor: 901 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
- Total maintainers: 1
bioconductor.org: ClustIRR
Clustering of immune receptor repertoires
- Homepage: https://github.com/snaketron/ClustIRR
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/ClustIRR/inst/doc/ClustIRR.pdf
- Licenses: GPL-3 + file LICENSE
- Latest release: 1.2.0 (published 12 months ago)
- Last Synced: 2024-05-18T00:20:48.526Z (12 months ago)
- Versions: 2
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 901 Total
-
Rankings:
- Dependent repos count: 0.0%
- Forks count: 30.1%
- Dependent packages count: 31.709%
- Stargazers count: 36.929%
- Average: 39.469%
- Downloads: 98.608%
- Maintainers (1)
Dependencies
- R >= 4.3.0 depends
- future * imports
- future.apply * imports
- igraph * imports
- methods * imports
- stats * imports
- stringdist * imports
- utils * imports
- visNetwork * imports
- BiocStyle * suggests
- ggplot2 * suggests
- ggrepel * suggests
- knitr * suggests
- patchwork * suggests
- testthat * suggests
Score: 9.849136957786047