https://github.com/core-bioinformatics/clustassess
Tools for assessing clustering robustness
https://github.com/core-bioinformatics/clustassess
Keywords
bioinformatics clustering genomics machine-learning parameter-optimization robustness single-cell unsupervised-learning
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Tools for assessing clustering robustness
- Host: GitHub
- URL: https://github.com/core-bioinformatics/clustassess
- Owner: Core-Bioinformatics
- License: other
- Created: 2021-03-26T11:39:11.000Z (about 4 years ago)
- Default Branch: main
- Last Pushed: 2024-05-30T14:22:35.000Z (11 months ago)
- Last Synced: 2024-05-30T17:23:12.808Z (11 months ago)
- Topics: bioinformatics, clustering, genomics, machine-learning, parameter-optimization, robustness, single-cell, unsupervised-learning
- Language: R
- Homepage: https://core-bioinformatics.github.io/ClustAssess/
- Size: 27.5 MB
- Stars: 19
- Watchers: 4
- Forks: 3
- Open Issues: 4
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: Cambridge Stem Cell Institute Core Bioinformatics group
- Login: Core-Bioinformatics
- Email:
- Kind: organization
- Description:
- Website: https://www.corebioinf.stemcells.cam.ac.uk/
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/71281163?v=4
- Repositories: 4
- Last ynced at: 2023-03-11T09:35:16.317Z
- Profile URL: https://github.com/Core-Bioinformatics
GitHub Events
Total
- Issues event: 3
- Watch event: 20
- Delete event: 2
- Issue comment event: 2
- Push event: 180
- Fork event: 3
- Create event: 5
Last Year
- Create event: 1
- Delete event: 1
- Issue comment event: 1
- Issues event: 1
- Push event: 87
- Watch event: 2
Committers metadata
Last synced: 12 months ago
Total Commits: 177
Total Committers: 4
Avg Commits per committer: 44.25
Development Distribution Score (DDS): 0.367
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Arash Shahsavari | s****h@s****e | 112 |
| AndiMunteanu | m****8@y****m | 33 |
| AndiMunteanu | 3****u | 28 |
| Arash Shahsavari | a****6@s****k | 4 |
Committer domains:
Issue and Pull Request metadata
Last synced: 11 months ago
Total issues: 5
Total pull requests: 0
Average time to close issues: 9 days
Average time to close pull requests: N/A
Total issue authors: 5
Total pull request authors: 0
Average comments per issue: 0.4
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 4
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 4
Past year pull request authors: 0
Past year average comments per issue: 0.25
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- aciobanusebi (1)
- Bao110110 (1)
- crisb420 (1)
- DKaukonen (1)
- saketkc (1)
Top Pull Request Authors
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 2
-
Total downloads:
- cran: 274 last-month
- Total dependent packages: 0 (may contain duplicates)
- Total dependent repositories: 0 (may contain duplicates)
- Total versions: 4
- Total maintainers: 1
cran.r-project.org: ClustAssess
Tools for Assessing Clustering
- Homepage: https://github.com/Core-Bioinformatics/ClustAssess
- Documentation: http://cran.r-project.org/web/packages/ClustAssess/ClustAssess.pdf
- Licenses: MIT + file LICENSE
- Latest release: 0.3.0 (published over 3 years ago)
- Last Synced: 2024-05-30T18:00:01.227Z (11 months ago)
- Versions: 3
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 274 Last month
-
Rankings:
- Stargazers count: 13.297%
- Forks count: 17.77%
- Dependent packages count: 29.797%
- Average: 31.465%
- Dependent repos count: 35.455%
- Downloads: 61.006%
- Maintainers (1)
conda-forge.org: r-clustassess
- Homepage: https://github.com/Core-Bioinformatics/ClustAssess
- Licenses: MIT
- Latest release: 0.3.0 (published about 3 years ago)
- Last Synced: 2024-05-30T18:00:06.272Z (11 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 34.025%
- Average: 46.801%
- Stargazers count: 47.816%
- Dependent packages count: 51.175%
- Forks count: 54.185%
Dependencies
- Matrix * imports
- Rcpp * imports
- doParallel * imports
- dplyr * imports
- fastcluster * imports
- foreach * imports
- ggplot2 * imports
- gtable * imports
- igraph * imports
- irlba * imports
- magrittr * imports
- methods * imports
- progress * imports
- reshape2 * imports
- rlang * imports
- stats * imports
- stringr * imports
- uwot * imports
- Seurat * suggests
- dbscan * suggests
- dendextend * suggests
- e1071 * suggests
- knitr * suggests
- patchwork * suggests
- readr * suggests
- rmarkdown * suggests
Score: 10.138559674715612