https://github.com/vivianstats/scinsight
Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
https://github.com/vivianstats/scinsight
Keywords
bioinformatics gene-expression integration scrna-seq
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
- Host: GitHub
- URL: https://github.com/vivianstats/scinsight
- Owner: Vivianstats
- Created: 2021-05-14T18:29:06.000Z (almost 4 years ago)
- Default Branch: master
- Last Pushed: 2022-05-29T06:35:34.000Z (almost 3 years ago)
- Last Synced: 2024-01-29T06:13:24.353Z (over 1 year ago)
- Topics: bioinformatics, gene-expression, integration, scrna-seq
- Language: C++
- Homepage: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02649-3
- Size: 4.8 MB
- Stars: 19
- Watchers: 1
- Forks: 2
- Open Issues: 7
- Releases: 0
-
Metadata Files:
- Readme: README.Rmd
Owner metadata
- Name: Vivian Li Lab
- Login: Vivianstats
- Email:
- Kind: user
- Description: Statistical and bioinformatics methods developed by the Wei Vivian Li Lab.
- Website: vivianli.org
- Location:
- Twitter: vivianstats
- Company: University of California, Riverside
- Icon url: https://avatars.githubusercontent.com/u/25557722?u=7c427ee0f85327e5dd08b64277b294844d36126f&v=4
- Repositories: 5
- Last ynced at: 2023-03-11T08:25:22.889Z
- Profile URL: https://github.com/Vivianstats
GitHub Events
Total
- Issues event: 11
- Watch event: 26
- Delete event: 1
- Issue comment event: 18
- Member event: 1
- Push event: 14
- Gollum event: 21
- Fork event: 2
- Create event: 3
Last Year
- Create event: 1
- Delete event: 1
- Issue comment event: 5
- Issues event: 2
- Watch event: 1
Committers metadata
Last synced: over 1 year ago
Total Commits: 11
Total Committers: 2
Avg Commits per committer: 5.5
Development Distribution Score (DDS): 0.364
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Kun Qian | s****k@g****m | 7 |
| Wei Vivian Li | l****w@u****u | 4 |
Committer domains:
- ucla.edu: 1
Issue and Pull Request metadata
Last synced: over 1 year ago
Total issues: 9
Total pull requests: 0
Average time to close issues: 20 days
Average time to close pull requests: N/A
Total issue authors: 7
Total pull request authors: 0
Average comments per issue: 1.67
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 3
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 2
Past year pull request authors: 0
Past year average comments per issue: 1.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- jeprob (2)
- XinyeZhao (2)
- ERIGR (1)
- jmuribes (1)
- nadinegheziel (1)
- YingboHuang (1)
- zyb1984 (1)
Top Pull Request Authors
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- cran: 185 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
cran.r-project.org: scINSIGHT
Interpretation of Heterogeneous Single-Cell Gene Expression Data
- Homepage: https://github.com/Vivianstats/scINSIGHT
- Documentation: http://cran.r-project.org/web/packages/scINSIGHT/scINSIGHT.pdf
- Licenses: GPL-3
- Latest release: 0.1.4 (published almost 3 years ago)
- Last Synced: 2024-05-31T18:20:29.162Z (11 months ago)
- Versions: 5
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 185 Last month
-
Rankings:
- Stargazers count: 13.297%
- Forks count: 21.888%
- Dependent packages count: 29.797%
- Average: 32.412%
- Dependent repos count: 35.455%
- Downloads: 61.626%
- Maintainers (1)
Dependencies
- methods * depends
- RANN * imports
- Rcpp * imports
- igraph * imports
- parallel * imports
- stats * imports
- stringr * imports
Score: 9.176990392294629