https://github.com/cmap/cmapr
Tools for manipulating annotated data matrices
https://github.com/cmap/cmapr
Keywords
bioconductor bioinformatics cmap
Keywords from Contributors
conda package-management transcriptomics genomics compression hdf5
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Tools for manipulating annotated data matrices
- Host: GitHub
- URL: https://github.com/cmap/cmapr
- Owner: cmap
- License: bsd-3-clause
- Created: 2017-03-28T19:39:01.000Z (about 8 years ago)
- Default Branch: master
- Last Pushed: 2021-10-13T00:33:40.000Z (over 3 years ago)
- Last Synced: 2024-05-21T01:45:53.393Z (12 months ago)
- Topics: bioconductor, bioinformatics, cmap
- Language: R
- Homepage:
- Size: 8.55 MB
- Stars: 80
- Watchers: 20
- Forks: 34
- Open Issues: 9
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: Connectivity Map at the Broad Institute
- Login: cmap
- Email: [email protected]
- Kind: organization
- Description: Helping drug discovery, one signature at a time
- Website: https://clue.io
- Location: Cambridge, MA 02142
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/2942112?v=4
- Repositories: 38
- Last ynced at: 2024-03-20T19:50:50.792Z
- Profile URL: https://github.com/cmap
GitHub Events
Total
- Issues event: 91
- Watch event: 80
- Delete event: 4
- Issue comment event: 155
- Push event: 188
- Pull request review event: 1
- Pull request event: 46
- Fork event: 44
- Create event: 12
Last Year
- Fork event: 1
- Issue comment event: 8
- Issues event: 5
- Watch event: 7
Committers metadata
Last synced: over 1 year ago
Total Commits: 230
Total Committers: 11
Avg Commits per committer: 20.909
Development Distribution Score (DDS): 0.148
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Ted Natoli | t****i@g****m | 196 |
| jasiedu | j****u@b****g | 9 |
| Nitesh Turaga | n****a@g****m | 6 |
| Oana Enache | o****e@g****m | 6 |
| Oana Enache | o****a@b****g | 5 |
| Mike Smith | g****h@g****m | 2 |
| Darío Hereñú | m****a@g****m | 2 |
| dedavison | d****n@b****g | 1 |
| Nuno Agostinho | n****o@g****m | 1 |
| Janani Ravi | j****i@m****u | 1 |
| OganM | o****i@g****m | 1 |
Committer domains:
- broadinstitute.org: 3
- msu.edu: 1
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 53
Total pull requests: 33
Average time to close issues: 6 months
Average time to close pull requests: 3 days
Total issue authors: 36
Total pull request authors: 7
Average comments per issue: 3.23
Average comments per pull request: 0.15
Merged pull request: 33
Bot issues: 0
Bot pull requests: 0
Past year issues: 3
Past year pull requests: 0
Past year average time to close issues: 2 days
Past year average time to close pull requests: N/A
Past year issue authors: 3
Past year pull request authors: 0
Past year average comments per issue: 3.33
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- tnat1031 (11)
- XiaohanChen97 (2)
- luyoutao (2)
- Jimmay13 (2)
- erikfel97 (2)
- enricoferrero (2)
- afaissa (2)
- antonkratz (2)
- wangyanmin123 (1)
- vjcitn (1)
- tapiocaaaa (1)
- rpeys (1)
- oena (1)
- nzllim (1)
- nuno-agostinho (1)
Top Pull Request Authors
- tnat1031 (24)
- kant (4)
- nuno-agostinho (1)
- jananiravi (1)
- oena (1)
- oganm (1)
- grimbough (1)
Top Issue Labels
- enhancement (9)
- bug (2)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- bioconductor: 21,377 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 3
- Total maintainers: 1
bioconductor.org: cmapR
CMap Tools in R
- Homepage: https://github.com/cmap/cmapR
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/cmapR/inst/doc/cmapR.pdf
- Licenses: file LICENSE
- Latest release: 1.14.0 (published over 1 year ago)
- Last Synced: 2024-05-21T01:00:59.307Z (12 months ago)
- Versions: 3
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 21,377 Total
-
Rankings:
- Dependent repos count: 0.0%
- Dependent packages count: 0.0%
- Average: 14.924%
- Downloads: 44.772%
- Maintainers (1)
Dependencies
- R >= 4.0 depends
- SummarizedExperiment * imports
- data.table * imports
- flowCore * imports
- matrixStats * imports
- methods * imports
- rhdf5 * imports
- BiocStyle * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests
Score: 16.8566492773644