https://github.com/ftwkoopmans/goat
GOAT: efficient and robust identification of gene set enrichment
https://github.com/ftwkoopmans/goat
Keywords
bioinformatics geneset-enrichment geneset-enrichment-analysis
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
GOAT: efficient and robust identification of gene set enrichment
- Host: GitHub
- URL: https://github.com/ftwkoopmans/goat
- Owner: ftwkoopmans
- License: apache-2.0
- Created: 2023-12-08T21:05:42.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2024-05-01T15:02:32.000Z (about 1 year ago)
- Last Synced: 2024-06-02T13:43:40.369Z (11 months ago)
- Topics: bioinformatics, geneset-enrichment, geneset-enrichment-analysis
- Language: R
- Homepage: https://ftwkoopmans.github.io/goat/
- Size: 81 MB
- Stars: 4
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE.md
Owner metadata
- Name: Frank Koopmans
- Login: ftwkoopmans
- Email:
- Kind: user
- Description:
- Website:
- Location: Amsterdam, The Netherlands
- Twitter:
- Company: Vrije Universiteit Amsterdam
- Icon url: https://avatars.githubusercontent.com/u/12510802?v=4
- Repositories: 1
- Last ynced at: 2023-06-14T18:37:11.991Z
- Profile URL: https://github.com/ftwkoopmans
GitHub Events
Total
- Create event: 3
- Release event: 3
- Issues event: 7
- Watch event: 4
- Issue comment event: 18
- Public event: 1
- Push event: 30
Last Year
- Create event: 3
- Issue comment event: 18
- Issues event: 7
- Public event: 1
- Push event: 30
- Release event: 3
- Watch event: 4
Committers metadata
Last synced: over 1 year ago
Total Commits: 12
Total Committers: 2
Avg Commits per committer: 6.0
Development Distribution Score (DDS): 0.083
Commits in past year: 12
Committers in past year: 2
Avg Commits per committer in past year: 6.0
Development Distribution Score (DDS) in past year: 0.083
| Name | Commits | |
|---|---|---|
| Frank Koopmans | f****s@g****m | 11 |
| Frank Koopmans | f****s | 1 |
Committer domains:
Issue and Pull Request metadata
Last synced: 11 months ago
Total issues: 4
Total pull requests: 0
Average time to close issues: 3 days
Average time to close pull requests: N/A
Total issue authors: 3
Total pull request authors: 0
Average comments per issue: 4.0
Average comments per pull request: 0
Merged pull request: 0
Bot issues: 0
Bot pull requests: 0
Past year issues: 4
Past year pull requests: 0
Past year average time to close issues: 3 days
Past year average time to close pull requests: N/A
Past year issue authors: 3
Past year pull request authors: 0
Past year average comments per issue: 4.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- ialbert (2)
- aswathyseb (1)
- szabzola (1)
Top Pull Request Authors
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- cran: 630 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 1
- Total maintainers: 1
cran.r-project.org: goat
Gene Set Analysis Using the Gene Set Ordinal Association Test
- Homepage: https://github.com/ftwkoopmans/goat/
- Documentation: http://cran.r-project.org/web/packages/goat/goat.pdf
- Licenses: Apache License (≥ 2)
- Latest release: 1.0 (published about 1 year ago)
- Last Synced: 2024-06-02T13:42:02.139Z (11 months ago)
- Versions: 1
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 630 Last month
-
Rankings:
- Dependent packages count: 27.794%
- Dependent repos count: 35.698%
- Average: 49.466%
- Downloads: 84.905%
- Maintainers (1)
Dependencies
- R >= 4.1.0 depends
- dplyr * depends
- Matrix * imports
- MonoPoly * imports
- Rcpp >= 1.0.9 imports
- data.table * imports
- readxl * imports
- tibble * imports
- tidyr * imports
- tidyselect * imports
- vctrs * imports
- writexl * imports
- AnnotationDbi * suggests
- GO.db * suggests
- fgsea * suggests
- ggplot2 * suggests
- ggraph * suggests
- igraph * suggests
- org.Hs.eg.db * suggests
- pheatmap * suggests
- testthat >= 3.0.0 suggests
Score: 8.526747404221048