https://github.com/nextstrain/nextclade

Nextclade: clade assignment, mutation calling and quality control for viral genomes - Published in JOSS (2021)
clade clades coronavirus covid covid-19 covid19 dna influenza ncov neherlab next-generation-sequencing nextstrain research rna sars-cov-2 science sequences sequencing strain virus
Added: 10 months ago - Last Synced: 10 months ago - Created: June 12, 2020

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: TypeScript
  • Commits: 5429
  • Committers: 28
  • Issues: 183
  • Pull Requests: 516
  • Owner: nextstrain
  • Stars: 246
  • Forks: 65
  • Packages: 2
  • Downloads: 581
https://github.com/open-atmos/PyMPDATA

PyMPDATA v1: Numba-accelerated implementation of MPDATA with examples in Python, Julia and Matlab - Published in JOSS (2022)
advection advection-diffusion atmospheric-modelling numba numerical-integration pde-solver pypi-package python research simulation
Added: 10 months ago - Last Synced: 10 months ago - Created: December 03, 2019

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 1114
  • Committers: 18
  • Issues: 80
  • Pull Requests: 384
  • Owner: open-atmos
  • Stars: 30
  • Forks: 22
  • Packages: 2
  • Downloads: 2,988
https://github.com/jspsych/jspsych

jsPsych: Enabling an Open-Source Collaborative Ecosystem of Behavioral Experiments - Published in JOSS (2023)
experimental-design experiments javascript jspsych psychology psychology-experiments research science
Added: 10 months ago - Last Synced: 10 months ago - Created: May 15, 2012

  • Relevant topics? false
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: TypeScript
  • Commits: 3360
  • Committers: 115
  • Issues: 244
  • Pull Requests: 293
  • Owner: jspsych
  • Stars: 1137
  • Forks: 718
  • Packages: 63
  • Downloads: 80,786
https://github.com/edyvision/pii-codex

PII-Codex: a Python library for PII detection, categorization, and severity assessment - Published in JOSS (2023)
analysis data-analysis personal-identifiable-information pii pii-detection poetry presidio python python3 research research-software research-tool
Added: 10 months ago - Last Synced: 10 months ago - Created: September 07, 2022

  • Relevant topics? false
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 49
  • Committers: 1
  • Issues: 6
  • Pull Requests: 34
  • Owner: EdyVision
  • Stars: 94
  • Forks: 11
  • Packages: 1
  • Downloads: 98
https://github.com/mrsonandrade/pyswarming

PySwarming: a research toolkit for Swarm Robotics - Published in JOSS (2023)
bioinspired engineering math mathematics multi-robot-systems pypi python python-toolkit research robot robotics self-organizing swarm swarm-intelligence swarm-robotics
Added: 10 months ago - Last Synced: 10 months ago - Created: September 09, 2022

  • Relevant topics? false
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 58
  • Committers: 2
  • Issues: 10
  • Pull Requests: 1
  • Owner: mrsonandrade
  • Stars: 29
  • Forks: 5
  • Packages: 1
  • Downloads: 37
https://github.com/ckdckd145/statmanager-kr

Statmanager-kr: A User-friendly Statistical Package for Python in Pandas - Published in JOSS (2024)
clinical-trials correlation-analysis easy-to-use null-hypothesis pandas pandas-python posthoc-comparisons research social-science statistical-analysis statistical-methods statistical-tests statistics ttest user-friendly visualize-differences visualizes-data
Added: 10 months ago - Last Synced: 10 months ago - Created: November 30, 2023

  • Relevant topics? false
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 199
  • Committers: 4
  • Issues: 3
  • Pull Requests: 10
  • Owner: ckdckd145
  • Stars: 10
  • Forks: 4
  • Packages: 1
  • Downloads: 731