Data

Tools

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Applications

Experiments

Open Sustainable Technology

https://github.com/georgeoshardo/symbac

Accurate segmentation of bacterial microscope images using synthetically generated image data.
biology image-processing microscopy segmentation synthetic-biology
Added: over 1 year ago - Last Synced: 11 months ago - Created: February 09, 2021

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Jupyter Notebook
  • Commits: 298
  • Committers: 7
  • Issues: 30
  • Pull Requests: 16
  • Owner: georgeoshardo
  • Stars: 17
  • Forks: 9
  • Packages: 1
  • Downloads: 192
https://github.com/pycroscopy/atomai

Deep and Machine Learning for Microscopy
deep-kernel-learning deep-learning electron-microscopy ensemble-learning fully-convolutional-networks google-colaboratory imaging jupyter-notebook machine-learning materials materials-science microscopy multivariate-analysis pytorch scanning-probe-microscopy semantic-segmentation variational-autoencoders
Added: over 1 year ago - Last Synced: 11 months ago - Created: September 04, 2020

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 1262
  • Committers: 8
  • Issues: 14
  • Pull Requests: 69
  • Owner: pycroscopy
  • Stars: 181
  • Forks: 37
  • Packages: 2
  • Downloads: 530
https://github.com/sebi06/napari-czann-segment

Semantic Segmention and Image2Image using DeepLearning ONNX models packaged as *.czann files.
apeer czmodel deep-learning image2image microscopy onnxruntime python semantic-segmentation
Added: over 1 year ago - Last Synced: 11 months ago - Created: June 18, 2022

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 73
  • Committers: 4
  • Issues: 1
  • Pull Requests: 6
  • Owner: sebi06
  • Stars: 7
  • Forks: 1
  • Packages: 2
  • Downloads: 115
https://github.com/tlambert03/llspy

Lattice light-sheet post-processing utility.
image-analysis image-processing light-sheet microscopy
Added: over 1 year ago - Last Synced: 11 months ago - Created: July 04, 2017

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Python
  • Commits: 808
  • Committers: 8
  • Issues: 34
  • Pull Requests: 13
  • Owner: tlambert03
  • Stars: 25
  • Forks: 6
  • Packages: 3
  • Downloads: 29