Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

https://github.com/showteeth/scfetch

Access and Format Single-cell RNA-seq Datasets from Public Resources
bam cellxgene fastq format-conversion-tool geo human-cell-atlas panglaodb single-cell-rna-seq sra ucsc-cell-browser zenodo
Added: over 1 year ago - Last Synced: about 1 year ago - Created: July 12, 2023

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: R
  • Commits: 68
  • Committers: 2
  • Issues: 1
  • Pull Requests: 0
  • Owner: showteeth
  • Stars: 23
  • Forks: 2
  • Packages: 1
  • Downloads: 194
https://github.com/chrovis/cljam

A DNA Sequence Alignment/Map (SAM) library for Clojure
2bit bam bcf bed bigwig bioinformatics clojure fasta fastq genomics gff sam vcf wig
Added: over 1 year ago - Last Synced: about 1 year ago - Created: January 08, 2014

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: Clojure
  • Commits: 1270
  • Committers: 17
  • Issues: 17
  • Pull Requests: 125
  • Owner: chrovis
  • Stars: 88
  • Forks: 12
  • Packages: 1
  • Downloads: 17,635
https://github.com/biod/sambamba

Tools for working with SAM/BAM data
bam bioinformatics sam
Added: over 1 year ago - Last Synced: about 1 year ago - Created: April 28, 2012

  • Relevant topics? true
  • External users? true
  • Open source license? true
  • Active? true
  • Fork? false
  • Main Language: D
  • Commits: 1068
  • Committers: 30
  • Issues: 104
  • Pull Requests: 11
  • Owner: biod
  • Stars: 555
  • Forks: 103
  • Packages: 0