Cifonauta

Marine biology image database by CEBIMar/USP.
https://github.com/bruvellu/cifonauta

Category: Biosphere
Sub Category: Marine Life and Fishery

Keywords

cnpq database django image-database marine-biology postgresql python scientific zoology

Last synced: about 22 hours ago
JSON representation

Repository metadata

Marine biology image database by CEBIMar/USP

Host: GitHub
URL: https://github.com/bruvellu/cifonauta
Owner: bruvellu
License: gpl-3.0
Created: 2010-11-23T04:36:40.000Z (over 14 years ago)
Default Branch: develop
Last Pushed: 2025-04-13T20:52:11.000Z (14 days ago)
Last Synced: 2025-04-17T23:52:00.855Z (10 days ago)
Topics: cnpq, database, django, image-database, marine-biology, postgresql, python, scientific, zoology
Language: Python
Homepage: http://cifonauta.cebimar.usp.br
Size: 8.91 MB
Stars: 24
Watchers: 4
Forks: 6
Open Issues: 36
Releases: 1
Metadata Files:
- Readme: README.md
- Contributing: docs/CONTRIBUTING.md
- License: LICENSE
- Code of conduct: docs/CODE_OF_CONDUCT.md
- Codeowners: .github/CODEOWNERS
- Security: docs/SECURITY.md

🌊 Cifonauta, an image database for marine biology

The Cifonauta database showcases the outstanding biodiversity of our oceans.
We have a vast collection of photos and videos featuring a wide range of marine organisms. These include the common creatures you may come across on the beach, as well as the rarest forms that can only be observed under a microscope.
The images were captured by scientists during their research and are accompanied by accurate scientific information, such as taxonomic classification, geolocation, habitat, life stage, size, and links to primary literature.
Whether you are searching for your favorite organism or simply want to explore the diversity of marine larvae or gelatinous creatures, our thematic tours, offer a curated experience.
All the contents are available under Creative Commons licenses.

Explore the marine biodiversity at cifonauta.cebimar.usp.br

How to cite

Individual photo or video:

Inácio Domingos da Silva Neto. Dinoflagellate (image). Cifonauta: marine biology image database. Available at https://cifonauta.cebimar.usp.br/media/8945/ Accessed on 2024-06-23.

The database itself:

Vellutini BC, Migotto AE (2011). Cifonauta: marine biology image database. Available at https://cifonauta.cebimar.usp.br/ Accessed on 2024-06-23.

Credits

The Cifonauta database was created by the Center for Marine Biology of the University of São Paulo (CEBIMar/USP).

Creators

Bruno C. Vellutini: Created the Cifonauta database and coordinated the development of v1 and v2. Contributed with shaping the concept, obtaining funding, designing the database and website, developing the backend and frontend, testing the application, curating the data, managing the repository and servers, and maintaining the codebase over the years.
Alvaro E. Migotto: Created the Cifonauta database and coordinated the development of v1 and v2. Contributed with creating the concept, obtaining funding, formulating features and implementation ideas, testing the application, and curating the data.

Contributors

Version 1 (2011–2024)

Roberto Faga: Improved the search interface and taxon navigation. Contributed with coding for the frontend.
Allan Rodrigo de Lima: Provided IT support. Contributed with setting up the servers that host the website.

Version 2 (2024–today)

Virginia Castilho: CEBIMar project manager of this version. Contributed with obtaining funding, planning and managing the project, formulating workflows and implementation ideas, testing the application, fixing bugs, and curating the data.
IN Junior Team (Luiz Felyppe Nunes dos Santos, Vitória Oliveira, João Diniz, Arthur Ferreira, João Guilherme Storti Scatambuli, Larissa Nascimento, Rian Breno Polonini): Developed the new admin dashboard and responsive design. Contributed with formulating workflows, designing implementations, and developing the new features in the backend and frontend of the application.
Marcelo Kitahara: Tested the new dashboard workflows. Contributed with testing the application.
Joel Simberg Vieira: Provided IT support. Contributed with setting up the virtual machines for hosting the website.

Content

Authors, curators, and editors: created, edited, and curated the photos and videos featured in the Cifonauta database. See the full list of contributors.

Funding

2008 - National Council for Scientific and Technological Development (CNPq), Call MCT/CNPq N°42/2007, Process 551951/2008-7. Supported the development of v1.
2022 - Pro-Rectory of Culture and University Extension (PRCEU), Call 02/2022 - Preservation and Curation of Collections and Cultural Heritage. Supported the development of v2.

Current team

Owner metadata

Name: Bruno C. Vellutini
Login: bruvellu
Email:
Kind: user
Description: Evolutionary developmental biologist interested in microscopy, image processing, and marine biodiversity
Website: https://brunovellutini.com/
Location: Dresden, Germany
Twitter: bruvellu
Company:
Icon url: https://avatars.githubusercontent.com/u/361179?v=4
Repositories: 33
Last ynced at: 2024-04-16T01:04:58.538Z
Profile URL: https://github.com/bruvellu

GitHub Events

Total

Create event: 2
Release event: 1
Issues event: 54
Watch event: 3
Delete event: 11
Issue comment event: 41
Push event: 157
Pull request review event: 8
Pull request review comment event: 6
Pull request event: 14
Fork event: 1

Last Year

Create event: 2
Release event: 1
Issues event: 54
Watch event: 3
Delete event: 11
Issue comment event: 41
Push event: 157
Pull request review event: 8
Pull request review comment event: 6
Pull request event: 14
Fork event: 1

Committers metadata

Last synced: 7 days ago

Total Commits: 2,566
Total Committers: 14
Avg Commits per committer: 183.286
Development Distribution Score (DDS): 0.307

Commits in past year: 419
Committers in past year: 3
Avg Commits per committer in past year: 139.667
Development Distribution Score (DDS) in past year: 0.062

Name	Email	Commits
Bruno Vellutini	o**s@g**m	1779
felyppe nunes	l**e@i**r	314
nelas	n**e@n**e	211
INJRVitoriaOliveira	v**a@i**r	87
João Diniz	j**z@i**r	55
Arthur Simoes Ferreira	a**a@i**r	50
Storti-Scatambuli	j**i@i**r	22
Virginia Castilho	1****a	20
Roberto Faga	r**a@g**m	8
Roberto Faga	f**a@c**t	8
Alexandre	a**o@o**m	6
Larissa Nascimento	l**o@i**r	4
Rian Breno Polonini	r**o@i**r	1
Roberto Faga Jr	f**a@f**)	1

Committer domains:

Issue and Pull Request metadata

Last synced: 2 days ago

Total issues: 165
Total pull requests: 112
Average time to close issues: 10 months
Average time to close pull requests: 6 days
Total issue authors: 4
Total pull request authors: 9
Average comments per issue: 0.88
Average comments per pull request: 0.24
Merged pull request: 98
Bot issues: 0
Bot pull requests: 13

Past year issues: 79
Past year pull requests: 17
Past year average time to close issues: about 1 month
Past year average time to close pull requests: 5 days
Past year issue authors: 2
Past year pull request authors: 3
Past year average comments per issue: 0.91
Past year average comments per pull request: 0.76
Past year merged pull request: 16
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/bruvellu/cifonauta

Top Issue Authors

bruvellu (152)
castilhovirginia (9)
Felyppe1 (2)
gepetobio (2)

Top Pull Request Authors

Felyppe1 (35)
Storti-Scatambuli (21)
dependabot[bot] (13)
bruvellu (12)
joaopedrodiniz (12)
ArthurSimoesFerreira (7)
castilhovirginia (6)
alexanmx (5)
INJRVitoriaOliveira (1)

Top Issue Labels

bug (39)
improvement (35)
improve (33)
feature (24)
fixme (22)

Top Pull Request Labels

fixme (15)
dependencies (14)
feature (12)
improvement (8)
bug (4)

Dependencies

requirements.txt pypi

django ==2.2.28
django-debug-toolbar *
django-modeltranslation ==0.17.3
django-mptt *
django-rosetta *
fabric *
patchwork *
pillow *
psycopg2 ==2.8.6
requests *
sorl-thumbnail *
wheel *

Score: 6.733401891837358

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