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biodivMapR

An R package for α- and β-diversity mapping using remotely-sensed images.
https://github.com/jbferet/biodivmapr

Category: Biosphere
Sub Category: Biodiversity Analysis and Metrics

Keywords

biodiversity diversity-mapping hyperspectral-imaging remote-sensing sentinel-2 tropical-forest

Keywords from Contributors

radiative-transfer-models preprocessing lidar

Last synced: about 2 hours ago
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Repository metadata

biodivMapR: an R package for α- and β-diversity mapping using remotely-sensed images

README.md

biodivMapR

An R package for α- and β-diversity mapping using remotely-sensed images

build
licence
version
version

1 Install

The package remotes first needs to be installed from the CRAN

install.packages("remotes")

biodivMapR should then be ready for installation with the following command line in your R session:

remotes::install_github('jbferet/biodivMapR')

2 Tutorial

A tutorial vignette is available here.

3 Citation

If you use biodivMapR, please cite the following references:

Féret, J.-B., de Boissieu, F., 2019. biodivMapR: an R package for α‐ and β‐diversity mapping using remotely‐sensed images. Methods Ecol. Evol. 00:1-7. https://doi.org/10.1111/2041-210X.13310

Féret, J.-B., Asner, G.P., 2014. Mapping tropical forest canopy diversity using high-fidelity imaging spectroscopy. Ecol. Appl. 24, 1289–1296. https://doi.org/10.1890/13-1824.1

4 Acknowledgments / Fundings

This research was supported by the Agence Nationale de la Recherche (ANR, France) through the young researchers project BioCop (ANR-17-CE32-0001)

Owner metadata

GitHub Events

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Last Year

Committers metadata

Last synced: 2 days ago

Total Commits: 416
Total Committers: 5
Avg Commits per committer: 83.2
Development Distribution Score (DDS): 0.252

Commits in past year: 76
Committers in past year: 1
Avg Commits per committer in past year: 76.0
Development Distribution Score (DDS) in past year: 0.0

Name Email Commits
Jean-Baptiste Feret j****t@t****r 311
floriandeboissieu f****s@g****m 94
Florian de Boissieu f****u@i****r 7
jean-baptiste.feret j****t@i****r 3
Björn Grüning b****n@g****u 1

Committer domains:

Issue and Pull Request metadata

Last synced: 1 day ago

Total issues: 31
Total pull requests: 13
Average time to close issues: about 2 months
Average time to close pull requests: about 1 month
Total issue authors: 27
Total pull request authors: 5
Average comments per issue: 2.26
Average comments per pull request: 0.23
Merged pull request: 9
Bot issues: 0
Bot pull requests: 0

Past year issues: 1
Past year pull requests: 1
Past year average time to close issues: 7 months
Past year average time to close pull requests: 4 months
Past year issue authors: 1
Past year pull request authors: 1
Past year average comments per issue: 1.0
Past year average comments per pull request: 1.0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/jbferet/biodivmapr

Top Issue Authors

  • jofeggg (4)
  • rrsc1234 (2)
  • andreitapch (1)
  • wuqinyu291 (1)
  • liliy182 (1)
  • downey205 (1)
  • simonbonnefoy (1)
  • LucasXin1 (1)
  • Vro1234 (1)
  • valeolmo (1)
  • ahmedshovon (1)
  • CRyan1 (1)
  • CostaVM (1)
  • npuletti (1)
  • bianca-jms (1)

Top Pull Request Authors

  • floriandeboissieu (8)
  • rnedelec (2)
  • bgruening (1)
  • icnds (1)
  • tangrong1 (1)

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Top Pull Request Labels

Package metadata

proxy.golang.org: github.com/jbferet/biodivmapr

  • Homepage:
  • Documentation: https://pkg.go.dev/github.com/jbferet/biodivmapr#section-documentation
  • Licenses: gpl-3.0
  • Latest release: v3.2.0+incompatible (published 7 days ago)
  • Last Synced: 2026-09-02T05:21:23.742Z (1 day ago)
  • Versions: 10
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Rankings:
    • Dependent packages count: 5.375%
    • Average: 5.556%
    • Dependent repos count: 5.736%
proxy.golang.org: github.com/jbferet/biodivMapR

  • Homepage:
  • Documentation: https://pkg.go.dev/github.com/jbferet/biodivMapR#section-documentation
  • Licenses: gpl-3.0
  • Latest release: v3.2.0+incompatible (published 7 days ago)
  • Last Synced: 2026-09-01T04:20:02.820Z (2 days ago)
  • Versions: 10
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Rankings:
    • Dependent packages count: 5.375%
    • Dependent repos count: 5.736%
    • Average: 5.867%
    • Forks count: 6.025%
    • Stargazers count: 6.332%
conda-forge.org: r-biodivmapr

  • Homepage: https://jbferet.github.io/biodivMapR/
  • Licenses: GPL-3.0-only
  • Latest release: 1.9.8 (published almost 4 years ago)
  • Last Synced: 2026-04-14T16:05:25.228Z (5 months ago)
  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 30,255 Total
  • Rankings:
    • Dependent repos count: 34.025%
    • Forks count: 40.923%
    • Average: 42.456%
    • Stargazers count: 43.699%
    • Dependent packages count: 51.175%

Dependencies

DESCRIPTION cran
  • R.utils * imports
  • data.table * imports
  • dissUtils * imports
  • ecodist * imports
  • emstreeR * imports
  • fields * imports
  • future * imports
  • future.apply * imports
  • geometry * imports
  • labdsv * imports
  • matlab * imports
  • matrixStats * imports
  • methods * imports
  • mmand * imports
  • raster * imports
  • rgdal * imports
  • rgeos * imports
  • sf * imports
  • snow * imports
  • sp * imports
  • stars * imports
  • stringr * imports
  • tools * imports
  • vegan * imports
  • zip * imports
  • knitr * suggests
  • rmarkdown * suggests
  • testthat >= 2.0.0 suggests
.github/workflows/tic.yml actions
  • actions/checkout v2.3.4 composite
  • actions/upload-artifact v2.2.1 composite
  • pat-s/always-upload-cache v2.1.3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-tinytex v2 composite

Score: 16.069989377882052