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Recent Releases of MAPL

MAPL - MAPL 2.71.0

DOI

This release of MAPL fixes a few bugs for our Python DSL work as well as issues found in using time_ave_util.x.

The other bulk of changes is to better support Baselibs and Spack builds of GEOS and MAPL. For this, we now use ESMA_cmake v4.44.0.

Tests show this is zero-diff to v2.70.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
    • NOTE: oneAPI 2026.0 and 2026.1 have issues with GFE libraries and MAPL
  • GCC 14.2.0, 15.2.0, 16.1.0
  • NAG 7.2
  • Flang 22.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.32.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.28.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.19.0 (optional)
      • fArgParse 1.11.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.2.28

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.44.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed the unreliable feedback from Python bridge failures
  • Fixed bug that allowed ExtData2G to proceed if an invalid sampling key was provided

Added

  • field_bundle_read can now fill an empty bundle from a file that has both edge and center 3D fields (forward port of MAPL 2.57.2 fix)

Changed

  • MAPL_GridGet will now return 0 instead of 1 if the grid was never set with the "LM" attribute for the vertical grid size
  • Removed the manual find_package(MPI)/find_package(NetCDF)/find_package(HDF5)/find_package(ESMF) block (and the Baselibs-only ESMF version guard) from the top-level CMakeLists.txt. As of ESMA_cmake v4.43.0, esma.cmake automatically include()s ConfigureBaselibs.cmake or ConfigureExternalLibraries.cmake based on Baselibs_FOUND right after include(FindBaselibs), creating all of these dependency targets for us, including enforcing a minimum ESMF version of 8.6.1 for both Baselibs and Spack/non-Baselibs builds
  • Update components.yaml
    • ESMA_cmake v4.44.0
      • Support for ESMFConfig.cmake
    • ESMA_cmake v4.43.0
      • Split dependency-target creation (NetCDF, HDF5, ESMF, FMS, etc.) out of FindBaselibs.cmake into ConfigureBaselibs.cmake and ConfigureExternalLibraries.cmake; esma.cmake now include()s the appropriate one automatically based on Baselibs_FOUND
      • Guard the historical ZLIB::zlib alias creation with if(NOT TARGET ZLIB::zlib)
      • Only look for FMS via find_package when FV_PRECISION is defined, so projects like MAPL that don't use FMS no longer require it
      • Enforce a minimum ESMF version for Baselibs builds (previously only enforced for Spack/non-Baselibs builds)
      • Added an ESMA_ESMF_MIN_VERSION variable, settable before include(esma), to control the minimum ESMF version enforced for both Baselibs and Spack builds (defaults to 8.6.1)
      • Suppress compiler -save-temps in Debug builds generated with Ninja to prevent parallel compile collisions for shared source basenames
      • Keep ESMF wrapper link options in INTERFACE_LINK_OPTIONS rather than treating them as libraries in FindESMF.cmake
      • Added copy_restarts() helper function to esma_regression_run_helpers.cmake for regression test restart handling
      • Update GitHub Actions workflow dependencies (actions/checkout, actions/upload-artifact) to current major versions
    • ESMA_cmake v4.42.0
      • Fix CMake 4.0 CMP0219 policy warning in esma_generate_gocart_code macro
      • Fix f2py and f2py3 NetCDF-Fortran builds and post-build Python import tests when dependencies are supplied by Spack
    • ESMA_cmake v4.41.0
      • Add new esma_install_manifest.cmake to create a manifest of installed files
      • Added esma_add_regression_tests() macro to centralise the CMake boilerplate for registering GEOS component regression tests
      • Added esma_sync_aws_s3_data.cmake and esma_regression_run_helpers.cmake to support S3-based regression test data
      • Switch macOS RPATH in osx_extras.cmake from absolute to relative (@loader_path/../lib) so experiment-local install trees resolve GEOS/MAPL shared libraries correctly

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.70.0...v2.71.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 12 days ago

MAPL - MAPL 2.57.2

DOI

This is a patch release on v2.57. This update provides the ability to read input files that have 3D variables both on center and edge variables.

This is zero-diff to v2.57.1.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • field_bundle_read can now fill an empty bundle from a file that has both edge and center 3D fields

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.57.1...v2.57.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 1 month ago

MAPL - MAPL 2.70.0

DOI

This release of MAPL v2 has a couple fixes.

First, it updates ExtData better support machines where not all files might be found. That is, if a user was running in the year 2000, but the beginning valid_range was in 1998, before ExtData would fail if a 1998 file was not found.

Second, this fixes a bug that prevented R8 exports being written as R4 output in History.

All tests show this is zero-diff compared to MAPL 2.69 for GEOSgcm

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 14.2.0 and 15.2.0
  • NAG 7.2
  • Flang 22.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.40.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fix typo in allreducesum.H
  • Fixed bug that prevented R8 exports being written as R4 output in History

Added

  • Add release guide (docs/releasing.md) documenting the MAPL release process

Changed

  • Update ExtData to not initialize primary items in multi rule case when the use this rule range does not overlap execution range
  • Update CI to use Baselibs 8.32.0 and circleci-tools orb v5
  • Update components.yaml
    • ESMA_env v5.24.0
      • Update to GEOSpyD 26.3.2 Python 3.14
      • Update GEOSgcm to use Baselibs 8.32.0
      • Move NAS runs to use Intel MPI by default
    • ESMA_cmake v4.40.0
      • Update ifx and NVHPC flags
      • Better detect FMS/yaml support (needed for spack)
      • Add new color_message function
      • Add helper script for regression test work

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.69.1...v2.70.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 months ago

MAPL - MAPL 3.0.0-alpha.2

DOI

This alpha release of MAPL v3 renames all MAPL public exports to all have "MAPL_" prefix.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 14.2.0 and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL 3 requires ESMF 9)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.37.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Renamed MAPL public exports to all have "MAPL_" prefix.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v3.0.0-alpha.1...v3.0.0-alpha.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 3 months ago

MAPL - MAPL 3.0.0-alpha.1

DOI

This is a new alpha release of MAPL v3. Much of this work was refactoring and file movement with some fixes and updates as detailed below.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 14.2.0 and 15.2.0
  • NAG 7.2
  • Flang 22.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL 3 requires ESMF 9)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.37.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • FieldBundleFilter for filtering field bundles by predicate.
  • Generic checkpointing support: MAPL_GridCompSetCheckpoint added to public
    API; StatisticsGridComp and GridComp now use the generic checkpoint mechanism.
  • MAPL_GridCompAddChild: new overloads accepting either a setservices procedure
    or a DSO name + procedure name.
  • MAPL_GriddedComponentDriver and MAPL_DriverInitializePhases added to
    public API.
  • StatisticsGridComp: extended to support variance of a single field.
  • FieldBundleGetPointerToData: added REAL64 overloads for 2D/3D index/name variants.
  • MAPL_STATEITEM_VECTOR item type support in ACG spec files.
  • PFIO layer now has a public API umbrella.
  • Re-export PackedDateCreate, PackedTimeCreate, PackedDateTimeCreate, and
    StrTemplate through the top-level MAPL umbrella module.
  • to_string (integer_to_string) added to mapl_StringUtilities.

Changed

  • MAPL v3 directory restructuring complete: consolidated sources into
    infrastructure/, superstructure/, enums/, utils/, mp_utils/, and
    base/; renamed gridcomps/ subdirectories to canonical lowercase names;
    removed all 3g suffixes from module and directory names; unified the
    mapl3g_ module namespace under mapl_.
  • Public API lockdown: all layer umbrella modules now carry explicit
    private + public :: declarations. Internal shim files dissolved; symbols
    routed through proper export umbrellas.
  • Namespace standardization: all internal module names follow the
    mapl_<Name>_mod convention. Unprefixed enum constants and types renamed to
    MAPL_-prefixed equivalents. Temporary backward-compatible aliases for unprefixed
    names are provided where needed (e.g. VerticalStaggerLoc enums) pending
    updates in downstream consumers.
  • MAPL_GridCompAddVarSpec replaced by MAPL_GridCompAddSpec (avoids exposing
    VariableSpec through use MAPL); old interface removed.
  • Cap.F90 and GEOS.F90 moved into mapl/; CapGridComp now invoked via DSO.
  • CI updated to Baselibs 8.32.0 and circleci-tools orb v5; components.yaml
    updated to ESMA_env v5.22.0 / GEOSpyD 26.3.2.

Fixed

  • Various compiler fixes: NVHPC build failure in OpenMP_Support.F90; ifx
    linker issue with error-handling thunks; NAG dangling pointer in checkpoint
    directory helper; IEEE trap suppression for sNaN on -Ktrap=fp builds.
  • VariableSpec/VectorClassAspect: fixed vector component naming lifecycle
    (names now resolved at create-time rather than deferred to add-to-state).
  • ACG lookup mappings made bidirectional so aliases and actual values are
    interchangeable in spec files.

Removed

  • Legacy error handling interfaces MAPL_RTRN, MAPL_Vrfy, MAPL_ASRT, and
    mapl_ExceptionHandling_mod.
  • Dead code: utils/TimeUtilities.F90, ESMF_Subset.F90, and other unused modules.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v3.0.0-alpha.0...v3.0.0-alpha.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 3 months ago

MAPL - MAPL 2.69.1

DOI

This is a patch release of MAPL 2.69. This release fixes a bug found in GEOSldas testing with the GNU compiler. It prevents getting values from un-associated array when built by GNU.

Tests show it is zero-diff to MAPL 2.69.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 14.2.0 and 15.2.0
  • NAG 7.2
  • Flang 22.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.37.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Check before assigning tilelons and tilelats in MAPL_Locstreamget

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.69.0...v2.69.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 3 months ago

MAPL - MAPL 3.0.0-alpha.0

Initial tag of MAPL v3.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.69.0...v3.0.0-alpha.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 4 months ago

MAPL - MAPL 2.69.0

DOI

Note to developers

This will be the last version of MAPL v2 based on the develop branch. MAPL v3 is now in active development and the develop branch will soon be MAPL v3 based.

We will branch main off of v2.69.0 as release/v2 and all PRs for MAPL v2 should be based on the release/v2 branch.

This release includes bug fixes, an enhancement to ExtDataDriver.x, and the removal of the short-lived MAPL_SUPPORT_MAPL3 build option.

Key Highlights:

  • New RUN_LIKE_MODEL option in ExtDataDriver.x: Controls whether the clock ticks before (model-like) or after (default/legacy) each step, making it easier to reproduce true model behavior in testing (#4886).

  • ExtData2G non-CF vertical coordinate compatibility: Improved handling of non-CF dimensionless vertical coordinates; standard_name is now mapped to long_name for better compatibility with non-CF inputs (#4802).

  • Bug Fixes:

    • Fixed a bug in WireComponent affecting TerminateImport and removed an unnecessary _ASSERT in MAPL_TerminateImportAllBut (#4674).
    • Fixed an informative error message when extrapolation is attempted without a valid range in ExtData2G (#4649).
    • Fixed SIGFPE (integer divide by zero) in MAPL_LoadBalanceMod when the load balancing algorithm evaluates maximum differences to zero (#4643).
    • Python bridge: removed an odd 3rd-party dependency caused by importing no_type_check outside the standard library (#4800).
    • Relaxed the comparison standard for grid_is_ok (#4870).

All testing shows this is zero-diff to MAPL 2.68.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2
  • Flang 22.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.37.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Relaxed comparison standard for grid_is_ok. Added a test program to querry index
  • Fixed bug in WireComponent affecting TerminateImport
  • Removed unnecessary _ASSERT in MAPL_TerminateImportAllBut
  • Fixed bug so that an informative error message will be emitted when extrapolation is attempted to be used without a valid range in ExtData2G
  • Fixed SIGFPE (integer divide by zero) in MAPL_LoadBalanceMod when load balancing algorithm evaluates maximum differences to zero.
  • Python bridge: remove odd 3rd party dependency due to importing no_type_check outside of the standard library

Added

  • Add new RUN_LIKE_MODEL options to ExtDataDriver.x to control whether clock ticks before (like model) or after (default and behaviour before this)

Changed

  • Switch 6 lightweight CI workflows to ubuntu-slim runner to reduce concurrency pressure on ubuntu-latest (#4841)
  • Update components.yaml
    • ESMA_cmake v4.37.0
      • Add Coverage CMake build type
  • Update CTest configuration for Coverage tests
  • Changed standard_name to long_name in handling of non-CF dimensionless vertical coordinate in ExtData2G

Removed

  • Removed MAPL_SUPPORT_MAPL3 CMake build option and all associated MAPL_TARGET_PREFIX variable logic (GH-4633). The dual-mount MAPL2+MAPL3 approach has been abandoned in favour of a single-mount MAPL3-only strategy.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.68.0...v2.69.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 4 months ago

MAPL - MAPL 2.68.0

This release includes many updates for both MAPL2 and for the upcoming move to MAPL3 as well as fixes for GEOSgcm development

This includes the introduction of a transitional mode to support MAPL3, enhancements to locstreams and tile file reading, and CDash and CI/CD pipelines. and several bug fixes.

Key Highlights:

  • MAPL3 Transitional Support: Added the MAPL_SUPPORT_MAPL3 CMake option (OFF by default) to compile MAPL2 as a support library alongside MAPL3, renaming targets with a MAPL2.* prefix.

  • Component Updates: Updated components.yaml to match GEOSgcm v12, bumping ESMA_env to v5.21.0 (Baselibs 8.27.0, featuring ESMF v9.0.0b10 and GFE v1.23.0), and ESMA_cmake to v4.36.0 with multiple macOS and f2py fixes.

  • CI/CD Enhancements:

    • CDash nightly workflows configured to build and test release/MAPL-v3 from main.
    • Expensive CI is now skipped on draft PRs.
    • Concurrency groups have been added to GitHub Actions to prevent runner limits.

  • New Features:

    • Added a "read and bcast" pattern for MAPL_ReadTilingNC4.
    • Simple locstreams can now be created with optional tilelons and tilelats.
    • Added support for creating a halo based on local displacement members (LDE).
    • Python bridge updates to support Python 3.12+, fix Python-side GPU uploads, and support the icx compiler.
    • Guarded IEEE halting mode calls on macOS Flang to resolve missing fe*except symbols.

All testing shows this is zero-diff to MAPL 2.67

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2
  • Flang 22.1.0

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b10 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.23.0
      • gFTL 1.17.0
      • gFTL-shared 1.12.0
      • pFUnit 4.16.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.18.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v4.36.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Python bridge: support for icx, fix GPU upload python side and updated base API to support python 3.12+
  • Guard IEEE halting mode calls on macOS flang to avoid missing fe*except symbols when initializing MPI.
  • Fixed some warnings with mlc link checker

Added

  • Added "read and bcast" pattern for MAPL_ReadTilingNC4
  • Added optional tilelons and tilelats to create a simple locstream
  • Add MAPL_SUPPORT_MAPL3 CMake option to reduce MAPL2 to a support library for use alongside MAPL3. When ON, the generic layer, gridcomps, Apps, benchmarks, docs, Python bridge, and top-level Tests are disabled; all CMake targets are renamed with a MAPL2.* prefix controlled by the MAPL_TARGET_PREFIX variable. Default is OFF (no change in behavior).
  • When MAPL_SUPPORT_MAPL3=ON, the umbrella module in MAPL/MAPL.F90 is renamed from module MAPL to module MAPL2 (and the alias from MAPL_Mod to MAPL2_Mod); use MAPL in hybrid mode is intentionally undefined. use ESMF_CFIOMod is now unconditional in both modes.
  • Add .mlc.toml file to configure mlc link checker
  • Added a new feature: create a halo based on local displacement members, local-displacement-ensemble (LDE), requested some time ago by Arlindo da Silva
  • CDash nightly workflow configured to build and test release/MAPL-v3 from the main branch
  • CTest dashboard configuration files (CTestDashboard.cmake, CTestConfig.cmake, CTestCustom.cmake) ported from release/MAPL-v3 to support nightly CI/CD testing

Changed

  • Skip expensive CI on draft PRs to match CircleCI behavior
    • Added ready_for_review trigger and if: github.event.pull_request.draft == false condition to workflow.yml, spack-ci.yml, and nag_build_discover.yml
  • Add concurrency groups to GitHub Actions workflows to prevent hitting runner concurrency limits on PRs
    • Added to workflow.yml, changelog-enforcer.yml, enforce-labels.yml, markup-link-checker.yml, validate_yaml_files.yml
    • Fixed spack-ci.yml to scope concurrency per PR number rather than per ref
  • Update components.yaml to match GEOSgcm v12
    • ESMA_env v5.21.0
      • Update to Baselibs 8.27.0
        • ESMF v9.0.0b10
        • GFE v1.23.0
          • gFTL v1.17.0
          • gFTL-shared v1.12.0
          • fArgParse v1.11.0
          • pFUnit v4.16.0
        • Better support for LLVM Flang
      • Fixes for Athena at NAS
      • Updates for DSL work
    • ESMA_cmake v4.36.0
      • Multiple fixes for f2py with spack and on macOS
      • CMake updates mainly for MAPL3 work
    • ecbuild geos/v3.13.1
  • Add CTest scheduling metadata for pFIO tests so parallel ctest runs do not overlap the pFIO performance cases in the same working directory.
  • Update CI to use Baselibs 8.27.0
  • CDash nightly GitHub Actions workflow now allows manual selection of branch, CMake build type, and compiler via workflow_dispatch
  • CDash nightly GitHub Actions workflow now includes the branch name in the CDash build_name for easier identification
  • CTestDashboard.cmake now combines install and build-tests targets into a single build step to accurately capture total build time in CDash
  • CDash nightly GitHub Actions workflow now triggers scheduled builds from main while testing the release/MAPL-v3 branch

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.67.0...v2.68.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 5 months ago

MAPL - MAPL 2.67.0

DOI

This release of MAPL introduces a two-way generic python bridge exposing limited MAPL feature down in Python. This is for our ongoing Python DSL-GPU work. The system is opt-in and by default users will not build it.

Testing shows this release is zero-diff to MAPL 2.66

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2
  • Flang 22.1.0

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b08 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.72.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Introducing a two-way generic python bridge exposing limited MAPL feature down in Python. The system is opt-in and uses
    dynamic loading of py package based on a user given string. It also provides with some tooling, to be expanded upon, to
    make using Fortran-allocated memory transparent.
  • Added optional local_id to create a simple locstream

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.66.0...v2.67.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 6 months ago

MAPL - MAPL 2.66.0

DOI

This release of MAPL is mainly for a fix in some sorting code used in GEOS for our boundary condition construction. An integer overflow was found at very-high resolution.

Beyond that are minor infrastructure updates to ESMA_env and ESMA_cmake as well as our beginning efforts at using ML agents with MAPL development.

This is zero-diff to MAPL v2.65

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b08 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.72.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Guarded against 32-bit integer overflow in QSswap

Added

  • Added 9 modular OpenCode agent skills for MAPL development workflows (replaces AGENTS.md)
    • mapl-setup: First-time environment configuration
    • mapl-build: Building with NAG, gfortran, Intel compilers
    • mapl-testing: Running and debugging tests with pFUnit
    • fortran-style: MAPL Fortran coding standards
    • mapl-error-handling: Error handling macros and best practices
    • github-workflow: Git/GitHub conventions and PR process
    • remote-build: Building on bucy with Intel compiler
    • pfunit-troubleshooting: Debug pFUnit test failures
    • compiler-switching: Switch between compilers safely
  • Added .rgignore to have ripgrep ignore common build directories

Changed

  • Update components.yaml
    • ESMA_env v5.17.0
      • Update to Baselibs 8.24.0
        • ESMF v9.0.0b08
        • GFE v1.22.0
          • pFUnit v4.15.0
        • curl 8.17.0
        • NCO 5.3.6
        • CDO 2.5.4
        • Various updates for Athena/Turin/TOSS5 at NAS
      • Support for Athena/Turin/TOSS5 at NAS
        • Update build.csh to support Athena/Turin/TOSS5 at NAS
          • Also remove Haswell
    • ESMA_cmake v3.72.0
      • Add USES_TERMINAL to our tests target to ensure output is shown as tests run with Ninja
      • Updates for f2py and f2py3 for running on macOS with Spack
      • Add Athena frontend nodes for NAS detection
      • Remove ctest pre-test build

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.65.0...v2.66.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 7 months ago

MAPL - MAPL 2.65.0

DOI

This is a new minor release of MAPL.

The main impetus for this release is it is part of a two-part fix for a memory leak found in the GEOSgcm mkiau code (used in Replay). This leak is seen prominently if you run replay for a long time on many cores.

This release also adds a new protection against doing time-averaged History output when the ref_time is incompatible with the frequency and start time in cap_restart. Before, the initial History output would be empty (all MAPL_UNDEF or 0.0) and this could cause unintended consequences down the line. So MAPL 2.65 takes the safe route where it now will halt if this condition is detected.

All tests show this is zero-diff to MAPL 2.64

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b08 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Added implementation for mapl_GetPartition() with unit tests. Replaces logic that will disappear with MAPL2
  • Added backwards compatibility with non-CF dimensionless vertical coordinate in ExtData2G
  • Added logic in History to check for consistent History and averaging coupler alarms

Changed

  • added formating string to the pFlogger call in FileBundleRead.F90 to avoid processing incidental '%' characters in the filename
  • replaced rc=status with _RC in MAPL_read_bundle
  • MAPL_read_bundle now logs the filename instead of the file template
  • added optional argument "NoGarbage" to MAPL_BundleDestroy
  • Updated CI to use Baselibs 8.24.0
    • This provides ESMF 9.0.0b08
    • Update ifx tests to 2025.3 (enabled by ESMF 9.0.0b08)

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.64.2...v2.65.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 7 months ago

MAPL - MAPL 2.64.2

This is a patch release on MAPL v2.64 with a fix for ExtData. A bug was found in ADAS testing where GAAS AOD files were not being read and a flaw in the file-finding logic was found. This was fixed on v2.57.1 and forward-ported to main.

This is zero-diff to v2.64.1 (unless the bug was triggered).

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.20.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed issue with find_any_file where bad logic caused issues with GAAS files not being read (forward port of MAPL 2.57.1 fix)

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.64.1...v2.64.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 8 months ago

MAPL - MAPL 2.57.1

This is a patch on MAPL v2.57.0 with a fix for ExtData. A bug was found in ADAS testing were GAAS AOD files were not being read. A flaw in logic was found.

This is zero-diff to v2.57.0 save where the bug was triggered.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed issue with find_any_file where bad logic caused issues with GAAS files not being read

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.57.0...v2.57.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 8 months ago

MAPL - MAPL 2.64.1

This is a patch release of MAPL 2.64. It restores a workaround for GNU for binary restart reads. This is used in the GEOS single column model (SCM).

This is zero-diff to v2.64.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.20.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Restore workaround for binary restart reads with GNU
    • Brings back changes from PR #1038: Added a workaround for a gfortran bug that handles end-of-file incorrectly (returns IOSTAT=5001).

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.64.0...v2.64.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 8 months ago

MAPL - MAPL 2.64.0

DOI

This release of MAPL has an update for MAPL_LocStream to support work ongoing in GEOSldas, adding the ability to pass Pfaffstetter index.

All tests show this is zero-diff to MAPL 2.63

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.20.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Added pfaf_index to MAPL_Locstream
  • Added a simple MAPL_LocstreamCreate

Changed

  • Enforced presence of grid when reading binary tile file

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.63.1...v2.64.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 9 months ago

MAPL - MAPL 2.63.1

DOI

This is a patch release on MAPL 2.63. This release fixes an issue needed for 1-d tile space output in netCDF format.

All tests show it zero-diff to MAPL 2.63.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.20.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Combine MAPL_Grid_interior and MAPL_GridgetInterior
    • This is needed for 1-d tile space output in netCDF4 format

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.63.0...v2.63.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 9 months ago

MAPL - MAPL 2.63.0

DOI

This release of MAPL 2 has many new updates and fixes.

The main updates are to handling of Tile grids for use in GEOSldas. There are also updates to the ACG Writer for our ongoing transition to MAPL3 as well as many internal changes to the CI.

All testing with GEOSgcm shows this to be zero-diff to MAPL 2.62

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.3
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.20.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.20.0
      • gFTL 1.16.0
      • gFTL-shared 1.11.0
      • pFUnit 4.13.0 (optional)
      • fArgParse 1.10.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.17.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.68.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Removed obsolete pfio test
  • Fix a memory leak in trajectory sampler due to misuage of FieldRegrid which should be FieldRedist
  • Fixed mapl_acg.cmake to allow for more than one StateSpecs file per target
  • Fix NVHPC issue with IEEE halting code
  • Fix a misspelled MAPL_LIBRARY_TYPE in vertical
  • Workaround for Flang

Added

  • Added updated version of MAPL_GridCompSpecs_ACG_writer.py
  • Added 'Gridname' attribute to history output
  • Create TilgridIO's outbundle from output grid and deallocate mGriddedIO in History
  • Added TileGridIO.F90 to output NC4 History file in tile space. The collection's format should be 'CFIO'
  • Added bit shave to TileGridIO

Changed

  • Update CI
    • Use Baselibs 8.20.0
    • Add gcc15 test
    • Use organization reusable workflows
    • Run CI build test with NAG on PRs
  • Update README_ACG_WRITER.md
  • Update components.yaml
    • ESMA_env v5.16.0
      • Update to Baselibs 8.20.0
        • GFE v1.20.0
          • gFTL v1.16.0
          • gFTL-shared v1.11.0
          • fArgParse v1.10.0
          • pFUnit v4.13.0
          • yaFyaml v1.6.0
          • pFlogger v1.17.0
        • NCO 5.3.5
        • This is mainly for ifx 2025.2 support
        • Requires CMake 3.24
    • ESMA_cmake v3.68.0
      • Update ifx flags to match as close as possible to ifort flags
      • Update site detection for NAS
      • Updates for f2py and flang

Removed

  • Removed TileIO.F90. It is integrated into TileGridIO.F90

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.62.2...v2.63.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 9 months ago

MAPL - MAPL 2.62.2

DOI

This is a patch release of MAPL 2.62. This fixes a bug when one of the two names in an ExtData2G rule for a vector is contained is a substring in another item, for example UA;VA and EVAP

Testing shows this is zero-diff to MAPL 2.62.1

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.2
    • NOTE: ifx 2025.2 support is currently a bit of a work-in-progress as it requires changes in upstream GFE libraries (pFlogger and pFUnit) as well as ESMA_cmake v3.65.0. Once releases are made of the GFE libraries, this will become simpler.
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.19.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.19.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.65.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed bug when one of the two names in an ExtData2G rule for a vector is contained is a substring in another item, for example UA;VA and EVAP

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.62.1...v2.62.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 10 months ago

MAPL - MAPL 2.62.1

This is a patch release of MAPL 2.62. This fixes a bug when regridding with grid that has PET with no DEs.

Testing shows this is zero-diff to 2.62.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.2
    • NOTE: ifx 2025.2 support is currently a bit of a work-in-progress as it requires changes in upstream GFE libraries (pFlogger and pFUnit) as well as ESMA_cmake v3.65.0. Once releases are made of the GFE libraries, this will become simpler.
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.19.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.19.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.65.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed bug when regridding with grid that has PET with no DEs

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.62.0...v2.62.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 11 months ago

MAPL - MAPL 2.62.0

DOI

This is a minor release of MAPL 2 which adds support for ifx 2025.2.

However, this support is not "instantaneous" at the moment. To build MAPL with ifx 2025.2, users will need to use ESMA_cmake v3.65.0 (which is what components.yaml points to) as well as updates in pFlogger (and its dependency yaFyaml) and pFUnit. These changes are all to workaround a preprocessor bug in ifx 2025.2 that will be fixed in ifx 2025.3. Releases of the GFE libraries will be forthcoming once full testing is done.

Note: @climbfuji has been able to update spack to make builds with ifx 2025.2 under spack easy until the GFE is updated.

All tests show this is zero-diff to MAPL 2.61

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.2
    • NOTE: ifx 2025.2 support is currently a bit of a work-in-progress as it requires changes in upstream GFE libraries (pFlogger and pFUnit) as well as ESMA_cmake v3.65.0. Once releases are made of the GFE libraries, this will become simpler.
  • GCC 13.2.0, 14.2.0, and 15.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.19.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 9.0.0b03 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.19.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.65.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • CMake workaround for ifx 2025.2
    • NOTE: Requires ESMA_cmake v3.65.0 for ifx 2025.2 support as well as updates in GFE not yet in Baselibs

Changed

  • Update components.yaml
    • ESMA_env v5.14.0
      • Update to Baselibs 8.19.0
        • esmf 9.0.0b03
        • curl 8.16.0
    • ESMA_cmake v3.65.0
      • Workaround for ifx 2025.2

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.61.0...v2.62.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 11 months ago

MAPL - MAPL 2.59.1

DOI

This is a patch on MAPL 2.59 to allow for use with ESMF v9. ESMF v9 is not required for this release, but rather changes in ESMF v9.0.0b03 are needed in MAPL3 development.

The release is necessary due to an internal change in ESMF v9 that exposed an issue with the deprecated ESMF_Attribute still used in MAPL2 (see https://github.com/esmf-org/esmf/issues/493). As such we now detect at runtime if ESMF v9 is being used and use the workaround code.

All tests with GEOSgcm show this to be zero-diff.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Added support for ESMF 9
    • Requires #ifdef to support changes in deprecated ESMF_Attribute API in ESMF 9
  • Improved some error statements

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.59.0...v2.59.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 12 months ago

MAPL - MAPL 2.61.0

DOI

This minor release of MAPL adds support for ESMF v9. ESMF v9 is not required for this release, but rather changes in ESMF v9.0.0b03 are needed in MAPL3 development.

The release is necessary due to an internal change in ESMF v9 that exposed an issue with the deprecated ESMF_Attribute still used in MAPL2 (see https://github.com/esmf-org/esmf/issues/493). As such we now detect at runtime if ESMF v9 is being used and use the workaround code.

All tests with GEOSgcm show this to be zero-diff.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.18.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.9.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.19.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.64.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Added support for ESMF 9
    • Requires #ifdef to support changes in deprecated ESMF_Attribute API in ESMF 9
  • Improved some error statements

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.60.0...v2.61.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 12 months ago

MAPL - MAPL 2.60.0

This release of MAPL has fixes and updates. Among the fixes are ones for NRL solar constant reads (when cycling over Cycle24) and fixes for NVHPC builds.

There are also two major changes. First, the default VERSION for HISTORY.rc is now 1 instead of 0. Nearly all GEOS History RC files have had VERSION: 1 at the top for many years and rely on functionality from it (e.g., using GRID_LABELS to specify grids). However, it was found that when this was accidentally left off by a user, the resulting run behavior was confusing as the symptoms were not obvious.

The other change is an enhancement of the MAPL Automatic Code Generator (ACG) which also fixes a bug in the Python. However, this bugfix can have an effect if a gridded component had a StateSpecs file that could trigger the bug. The issue was one of the "columns" a StateSpecs file can have is for how to handle fields restarts. MAPL has options like MAPL_RestartOptional and MAPL_RestartSkip that tell MAPL if a field is optional (if not present, that's okay) or skippable (if not present, okay, and do not write).

The ACG has allowed two ways for users to specify these options. You could use OPT or MAPL_RestartOptional and SKIP or MAPL_RestartSkip. The bug was that if a user didn't use the abbreviated option, the ACG did not emit the corresponding line.

An exemplar StateSpecs would be:

category: INTERNAL
#----------------------------------------------------------------------------------------
#  VARIABLE                | DIMENSION        |          Additional Metadata
#----------------------------------------------------------------------------------------
  NAME | UNITS | DIMS | VLOC | UNGRIDDED | RESTART | ADD2EXPORT | FRIENDLYTO | LONG NAME
#----------------------------------------------------------------------------------------
 SS              |kg kg-1| xyz  | C    | self%nbins | MAPL_RestartOptional | T | DYNAMICS:TURBULENCE:MOIST | Sea Salt Mixing Ratio (bin %d)
 DEEP_LAKES_MASK |   1   | xy   | N    |            | MAPL_RestartSkip     | F |                           | Deep Lakes Mask

Here we have two fields one, SS is MAPL_RestartOptional, and DEEP_LAKES_MASK is MAPL_RestartSkip. The difference in emitted code between MAPL 2.59 (and earlier) and MAPL 2.60 is:

@@ -15,6 +15,7 @@
         & dims=MAPL_DimsHorzVert, &
         & vlocation=MAPL_VlocationCenter, &
         & ungridded_dims=[self%nbins], &
+        & restart=MAPL_RestartOptional, &
         & add2export=.true., &
         & friendlyto='DYNAMICS:TURBULENCE:MOIST', &
         & long_name='Sea Salt Mixing Ratio (bin %d)', &
@@ -26,6 +27,7 @@
         & units='1', &
         & dims=MAPL_DimsHorzOnly, &
         & vlocation=MAPL_VlocationNone, &
+        & restart=MAPL_RestartSkip, &
         & add2export=.false., &
         & long_name='Deep Lakes Mask', &
         & _RC)

MAPL 2.60 now correctly emits the restart= line. Now, for fields that use MAPL_RestartOptional instead of OPT the bug was a no-op. In MAPL, if there is no restart= line, the default to do is MAPL_RestartOptional. But the other MAPL_Restart* options would be affected.

For GEOSgcm, the only StateSpecs file that is affected is SS2G_StateSpecs.rc. So for GEOSgcm, when you compare a run with MAPL 2.59 to MAPL 2.60, the ss_internal_checkpoint will not have the DEEP_LAKES_MASK variable since it is now correctly skipped.

NOTE: The presence of DEEP_LAKES_MASK does not affect the state of the model. This mask is recomputed on each run and is constant.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 8.18.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.9.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.19.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.64.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fix NRL Solar Constant read routine for cycle-Cycle24 option
  • Change a few keyword names in sampler for consistency with HISTORY
  • Fixes for NVHPC: Move some subroutines in MAPL_MaskMod from submodule to module
  • Fix for NAG + macOS Arm which does not support IEEE halting properly

Changed

  • Updated the default VERSION in History to 1 (which has been the effective default in HISTORY.rc for some time)
  • Update components.yaml
    • ESMA_env v5.13.0
      • Update to Baselibs 8.18.0
        • ESMF 8.9.0
        • curl 8.15.0
        • NCO 5.3.4
        • CDO 2.5.3
        • nccmp 1.10.0.0
        • Removed szip, added libaec
          • Note: To use libaec correctly, users should use ESMA_cmake v3.63.0/v4.20.0 or higher
    • ESMA_cmake v3.64.0
      • Support for libaec
      • Add FindISSM.cmake
  • Update CI to use Baselibs 8.18.0
  • Allow row lookups to return key if key in values (ACG2)

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.59.0...v2.60.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 12 months ago

MAPL - MAPL 2.59.0

DOI

This release of MAPL has some fixes, the most important of which is a fix to stretched grid attributes in ExtData (note: not ExtData2G), see https://github.com/GEOS-ESM/MAPL/pull/3926. This mainly affects our GCHP colleagues.

This release also fixed issues with 0d string handling in pfio.

All tests with GEOSgcm show this to be zero-diff to MAPL 2.58

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed 0d string reading and writing
  • Minor bug fix in pfio test_prefetch_data test
  • Fixed stretched grid target lat/lon unit conversion in ExtData
  • Fix a typo in trajectory sampler

Added

  • Added tests to read and write 0d and 1d string to and from netcdf files

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.58.1...v2.59.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 1 year ago

MAPL - MAPL 2.58.1

This is a patch release of MAPL 2.58. It fixes a bug preventing compilation by NAG Fortran.

This release also prettyfies the wall clock print introduced in MAPL 2.58.0.

Zero-diff to MAPL 2.58.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed typo in wallclock print

Changed

  • Updated wallclock print to be more readable: Wallclock: 2025/07/17 20:02

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.58.0...v2.58.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 1 year ago

MAPL - MAPL 2.58.0

DOI

This release of MAPL is mainly for additions to the per-step timer output to also display the walldate and time:

 GCM Date: 2000/04/14  Time: 21:07:30  Throughput(days/day)[Avg Tot Run]:         36.8         36.8         36.9  TimeRemaining(Est) 000:01:25    0.0% :   0.0% Mem Comm:Used ; 20250717 20:02

At the end is: 20250717 20:02 This will be useful for letting users know when the model was running to allow for better interfacing with computing centers when looking at issues/profiling.

All tests show this is zero-diff to MAPL 2.57

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fix some incorrect links in the documentation

Added

  • Add new markup link checker based on mlc

Changed

  • Added RC for Timer call in MAPL_Generic.F90
  • Adds the wall clock date and time to the GCM stdout log so we can more readily diagnose slow periods of performance during the run

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.57.0...v2.58.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 1 year ago

MAPL - MAPL 2.57.0

DOI

This version of MAPL has many new features including:

  • Added a new EASE Grid Factory (based on code previously in GEOSgcm_GridComp)
  • Added new option to History, if you specify xlevels instead of levels, it will perform extrapolation below the surface, using ECMWF formulas for height and temperature, otherwise use lowest model level
  • Added _USERRC macro for use with ESMF commands that return both rc and userrc
  • Added new option for raw_bw.x to use netcdf rather than binary
  • Various updates for the trajectory samplers

NOTE: There is one change that can affect some diagnostic prints made by MAPL. The per-step diagnostic print was changed from being hardcoded as AGCM Date to now trigger off of the ROOT_NAME in CAP.rc. So, if ROOT_NAME is GEOSldas, the print will be GEOSldas Date instead of AGCM Date.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • StateFilterItem => MAPL_StateFilterItem in ACG
  • Fix binary writes and reads in benchmark simulators
  • Removed _HERE macros left in ExtDataGridCompNG.F90 from debugging

Added

  • Added functions to read and write 0d string to nc4 file.
  • Added EASE grid Factory so the regridder can use it easily
    • NOTE: The public EASE routines moved to MAPL have been prefixed with MAPL_. This allows older versions of GEOSgcm_GridComp to use MAPL 2.57+ but have the old routines
  • Added new option to History, if you specify xlevels instead of levels, it will perform extrapolation below the surface, using ECMWF formulas for height and temperature, otherwise use lowest model level
  • Added _USERRC macro for use with ESMF commands that return both rc and userrc
  • Added new option for raw_bw.x to use netcdf rather than binary
  • Swapped order of output dimensions for trajectory and mask samplers. Now the leading dimension (Fortran convention) is level.

Changed

  • Changed per-step diagnostic print from being hardcoded as AGCM Date to now trigger off of the ROOT_NAME in CAP.rc. So, if ROOT_NAME is GEOSldas, the print will be GEOSldas Date instead of AGCM Date.
  • Update the MAPL_EQsat code to the ramping version from CVS
  • Add schema.version: 1 to enable trajectory sampler using a single GRID_LABEL item
  • index_var_names keyword is introduced to simpify the specifications for IODA files
  • delete obsfile_end_time in trajectory sampler
  • change geoval_fields to fields in obs_platform
  • change sampler_spec to sampler_type

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.56.1...v2.57.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 1 year ago

MAPL - MAPL 2.56.1

DOI

This is a patch on MAPL 2.56 which fixes an issue so that if ExtData cannot find a file and fail on missing is false, just set collection to /dev/null. This is mainly an issue with GAAS runs of GEOSgcm and most users would not encounter it.

All tests show this is zero-diff to MAPL 2.56.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed issue so that if ExtData cannot find a file and fail on missing is false, just set collection to /dev/null

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.56.0...v2.56.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.56.0

DOI

This is a minor release of MAPL 2. This has many updates and fixes. Among the notable changes are:

  • Fixes to sampler output
  • Fixed uninitialized num_levels bug causing gcc14 to crash a node due to allocating enormous amount of memory
  • Fix for GNU + MVAPICH 4 disabling ieee halting around MPI_Init_thread()
  • Added a new StateFilterItem funtion to apply a mask or extra using a combination of variables from a state and return an array with the result, can specify default
  • Implemented a new feature in to allow users to select the appropriate ESMF_PIN values. Users control this via CAP.rc and the choices are:
    • ESMF_PINFLAG: PET --> ESMF_PIN_DE_TO_PET
    • ESMF_PINFLAG: VAS --> ESMF_PIN_DE_TO_VAS
    • ESMF_PINFLAG: SSI --> ESMF_PIN_DE_TO_SSI
    • ESMF_PINFLAG: SSI_CONTIG --> ESMF_PIN_DE_TO_SSI_CONTIG (default with no setting)
  • Added a new column to the ACG (MAPL2), FILTER, which generates declarations and allocations of arrays (StateFilterItem)

All testing with GEOS shows this to be zero-diff to MAPL 2.55

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.33.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.1 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.62.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed sampler history output
  • Fixed bug with dervied exports in ExtData in filter function
  • define comp_name in MAPL_GridCreate when GC is not present
  • Fixed bug in profiler demo
  • Fixed uninitialized num_levels bug causing gcc14 to crash a node due to allocating enormous amount of memory
  • Fix for GNU + MVAPICH 4 disabling ieee halting around MPI_Init_thread()
  • Test if GridCornerLons: and GridCornerLats: attributes are present before removing
  • Fixed ExtData bug causing time interpolation to be skipped if no current reads

Added

  • Added logging prints for MAPL_read_bundle
  • Added a new StateFilterItem funtion to apply a mask or extra using a combination of variables from a state and return an array with the result, can specify default
  • Implemented a new feature in to allow users to select the appropriate ESMF_PIN values. Users control this via CAP.rc and the choices are:
    • ESMF_PINFLAG: PET --> ESMF_PIN_DE_TO_PET
    • ESMF_PINFLAG: VAS --> ESMF_PIN_DE_TO_VAS
    • ESMF_PINFLAG: SSI --> ESMF_PIN_DE_TO_SSI
    • ESMF_PINFLAG: SSI_CONTIG --> ESMF_PIN_DE_TO_SSI_CONTIG (default with no setting)
  • Added a new column to the ACG (MAPL2), FILTER, which generates declarations and allocations of arrays (StateFilterItem)
  • Add BUILD_INFO.rc file that contains build info filled in by CMake

Changed

  • Update components.yaml
    • ESMA_env v4.38.0
      • Update to Baselibs 7.33.0
        • ESMF 8.8.1 (needed for MAPL3)
        • Fixes for CMake 4
      • Cache ENVIRONMENT_MODULES
    • ESMA_cmake v3.62.1
      • Fix for XCode 16.3
      • Fixes for f2py with MPT
      • Fixes for f2py on various machines
      • Cache proc_description
      • Support for ecbuild updates
      • Enforce our allowed CMAKE_BUILD_TYPE
  • Update documentation on ACG in repo
  • Update CI to use ifx 2025.1
  • Update Tests to ExtData1G tests are ESSENTIAL and run by default again

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.55.1...v2.56.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.53.4

DOI

This release of MAPL 2.53 has a fix to correct some ESMF Errors encountered by our UFS colleagues (see https://github.com/ufs-community/ufs-weather-model/issues/1888). We now check first if an ESMF Attribute exists before attempting to remove it.

Testing shows this is zero-diff to MAPL 2.53.3

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Test if GridCornerLons: and GridCornerLats: attributes are present before removing

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.53.3...v2.53.4

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.53.3

DOI

This release of MAPL 2.53 adds the ability to set the ESMF_PIN setting via CAP.rc. The allowed settings are:

  • ESMF_PINFLAG: PET --> ESMF_PIN_DE_TO_PET
  • ESMF_PINFLAG: VAS --> ESMF_PIN_DE_TO_VAS
  • ESMF_PINFLAG: SSI --> ESMF_PIN_DE_TO_SSI
  • ESMF_PINFLAG: SSI_CONTIG --> ESMF_PIN_DE_TO_SSI_CONTIG

The default (to match default behavior in v2.53.2) is SSI_CONTIG and if nothing is set in CAP.rc this will be used.

This was needed for our UFS collaborators who found SSI_CONTIG led to run time issues.

All testing shows this is zero-diff to v2.53.2

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Implemented a new feature in to allow users to select the appropriate ESMF_PIN values. Users control this via CAP.rc and the choices are:
    • ESMF_PINFLAG: PET --> ESMF_PIN_DE_TO_PET
    • ESMF_PINFLAG: VAS --> ESMF_PIN_DE_TO_VAS
    • ESMF_PINFLAG: SSI --> ESMF_PIN_DE_TO_SSI
    • ESMF_PINFLAG: SSI_CONTIG --> ESMF_PIN_DE_TO_SSI_CONTIG

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.53.2...v2.53.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.55.1

DOI

This is a patch release of MAPL 2.55 which renames a module for conservative vertical regridding code so as to not conflict so an external module. It also adds a few error traps in ExtData when processing vertical coordinate for use in regridding

Testing shows zero-diff to MAPL 2.55.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.32.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.58.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Renamed module for convervative vertical regridding code so as to not conflict so an external module

Added

  • Added a few error traps in ExtData when processing veritcal coordinate for use in regridding

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.55.0...v2.55.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.55.0

DOI

This release of MAPL has many new fixes and updates. Among the updates are:

  • Ability to read and write nc4 tile files
  • Preliminary capabilities for online vertical remapping in ExtData2G
  • Updates to CI

And the highlights of fixes include:

  • Fixed problem in History when no fields appear on the fields: line in a collection (issue #3525)
  • Relaxed the MPI thread levels to MPI_THREAD_SERIALIZED required by ESMF

All testing shows MAPL 2.55 is zero-diff to MAPL 2.54

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.32.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.8.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.15.2
      • gFTL-shared 1.10.0
      • pFUnit 4.11.1 (optional)
      • fArgParse 1.9.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.16.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.58.1

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed problem related to stale pointers to temp copies of dummy arguments in MAPL_Cap.F90. Fix is to add TARGET attribute in select locations.
  • Fix for case where 2nd argument to transfer() was not allocated in the OpenMP support layer. Was not detected by other compilers. The fix is to use a literal integer array instead.
  • Fixed problem in History when no fields appear on the fields: line in a collection (issue #3525)
  • Fixed bug that broke SCM model in GEOS
  • Fix ExtData2G unit test for GNU on Discover
  • Fixed nesting of internal timers (issue #3412)
  • Fixed issue of make tests not building all needed executables
  • Incorrect specification of EOL for Darwin+NAG in MAPL_Config.
  • Untrapped exceptions in MAPL_LatLonGridFactory.F90

Added

  • Added subroutine to write nc4 tile file
  • Added new supported units for vertical regridding in ExtData, now supports kg kg-1, mol mol-1, kg m-2 as well as per second variations of these, i.e. kg kg-1 s-1
  • Added CI build using spack
  • Added Release build CI tests for MAPL
  • Added new option to rule for ExtData2G to disable vertical regridding, default is true, vertical regridding is disabled
  • Added experimental capabiltiy to regrid from constituents in volume mixing, mass mixing, emissions units from one set of hybrid sigma levels to model levels in ExtData2G
  • Added subdirectory GetHorzIJIndex in the Tests directory for testing subroutine MAPL_GetHorzIJIndex to ensure the subroutine fails is the cubed-sphere assumption is violated and also if the returned I and J indices are not correct.

Changed

  • Changed ExtData keyword disable_vertical_regridding (default true) to enable_vertical_regridding (default false)
  • Relaxed the MPI thread levels to MPI_THREAD_SERIALIZED required by ESMF
  • Update components.yaml
    • ESMA_env v4.36.0
      • Update to Baselibs 7.32.0 (gFTL v1.15.2 needed for MAPL3 work)
      • Remove SLES12 at NCCS, update to GEOSpyD 24.11.3
    • ESMA_cmake v3.58.1
      • Remove SLES12 at NCCS, update f2py detection, update ifx flags
      • Clean up GCC 10+ warnings
  • Update .editorconfig for Fortran files enforcing 3-space indents and line length of 132
  • Migrated much of the CI to GitHub Actions

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.54.2...v2.55.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.53.2

DOI

This is a patch release on MAPL 2.53 that better expresses the MPI Thread level requirements for MAPL. Per discussion with ESMF, it was found that the minimum threading level is MPI_THREAD_SERIALIZED

All tests with GEOS show this to be zero-diff.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Relaxed the MPI thread levels to MPI_THREAD_SERIALIZED required by ESMF

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.53.1...v2.53.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.54.2

DOI

This release of MAPL 2.54 fixes a bug identified by NAG when processing history collection list.

Tests show it is zero-diff to MAPL 2.54.1

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

[2.54.2] - 2025-03-18

Fixed

  • Fixed bug when processing history collection list identified by NAG

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.54.1...v2.54.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.54.1

DOI

This is a patch on MAPL 2.54 which fixes a typo in the automatic code generator

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

[2.54.1] - 2025-02-07

  • Fix typo in ACG: 'num_subtitles' => 'num_subtiles'

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.54.0...v2.54.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.54.0

DOI

This version of MAPL adds a new "column" to the automatic code generator (ACG), ALIAS, that allows a user to set a pointer variable to a different name. This prevents collisions between, say, import and export pointers.

All testing shows this to be zero-diff to MAPL 2.53

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Add column for ACG (ALIAS) that set the pointer variable to a different name than the short_name
  • Updated CI to use Baselibs 7.31.0
    • Updates to GFE v1.18.0

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.53.1...v2.54.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.53.1

This is a patch on MAPL 2.53 which fixed a rare case where runs could deadlock in MAPL_GetHorzijIndex. Most users would not encounter this issue.

All tests show it zero-diff to MAPL 2.53.0

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Fixed bug with MAPL_GetHorzijIndex when not points are passed on a processor causing a deadlock

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.53.0...v2.53.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.53.0

DOI

This release of MAPL has a bugfix for an issue discovered by our UFS users. Namely, it fixes a bug when MAPL is used with OpenMP in a certain way such that the correct dimensions for the MPI subdomain could be retrieved from the subgrids where ever needed.

It also updates ExtData so that if files are missing in a sequence the last value will be persisted if one has not chosen exact option

All testing with GEOSgcm shows this to be zero-diff.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Updated ExtData so that if files are missing in a sequence the last value will be perisisted if one has not chosen exact option
  • Update components.yaml
    • ESMA_env v4.34.1
      • Fix GEOSpyD module on GMAO Desktops

Fixed

  • Changes were made to add attributes to the subgrids (i.e. created by dividing the MPI subdomain into smaller subdomains equal to the number of OpenMP threads) such that the correct dimensions for the MPI subdomain could be retrieved from the subgrids where ever needed.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.52.0...v2.53.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.52.0

DOI

This release of MAPL has many new features and fixes over MAPL 2.52.

Among the new features are:

  • Added the ability to read netCDF tile files
  • Added a new optional start_date and start_time to control the output window for each History collection. No output will be written before then. If not specified, these default to the beginning of the experiment.
  • Added loggers when writing or reading weight files
  • Added new option to AGCM.rc overwrite_checkpoint to allow checkpoint files to be overwritten. By default still will not overwrite checkpoints
  • The trajectory sampler netCDF output variable location_index_in_iodafile can be turned off, after we add two control variables: use_NWP_1_file and restore_2_obs_vector for users. When set to true, the two options will select only one obs file at each Epoch interval, and will rotate the output field index back to the location vector inthe obs file before generating netCDF output.
  • Support splitfield: 1 in HISTORY.rc for trajectory sampler

The fixes include better freeing of MPI communicators (which were accumulating during long runs) and better behavior of calls when NaNs are present.

All testing with GEOS shows this is zero-diff to MAPL 2.51

NOTE: Below you'll see that we are now generally testing MAPL (in CI) with ESMF 8.8.0. At the moment, ESMF 8.8.0 is not required for MAPL 2. It is a requirement for MAPL 3 but we have not yet added any use of ESMF 8.8 specific features in MAPL 2.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Added subroutine to read nc4 tile file
  • Added optional start_date and start_time to control the output window for each History collection. No output will be written before then. If not specified, these default to the beginning of the experiment.
  • Added utility to prepare inputs for ExtDataDriver.x so that ExtData can simulate a real GEOS run
  • Added loggers when writing or reading weight files
  • Added new option to AGCM.rc overwrite_checkpoint to allow checkpoint files to be overwritten. By default still will not overwrite checkpoints
  • The trajectory sampler netCDF output variable location_index_in_iodafile can be turned off, after we add two control variables: use_NWP_1_file and restore_2_obs_vector for users. When set to true, the two options will select only one obs file at each Epoch interval, and will rotate the output field index back to the location vector inthe obs file before generating netCDF output.
  • Support splitfield: 1 in HISTORY.rc for trajectory sampler

Changed

  • Changed MAPL_ESMFRegridder to require the dstMaskValues to be added as grid attribute to use fixed masking, fixes UFS issue
  • Increased formatting width of time index in ExtData2G diagnostic print
  • Updated GitHub checkout action to use blobless clones
  • Update CI to use Baselibs 7.29.0 by default
    • This provides ESMF 8.8.0
  • Update components.yaml
    • ESMA_env v4.34.0
      • Update to MPT 2.30 at NAS
      • Update to Baselibs 7.29.0 (ESMF 8.8.0)
    • ESMA_cmake v3.56.0
      • Use LOCATION Python FIND_STRATEGY

Fixed

  • Free MPI communicators after reading and/or writing of restarts
  • Fixed the behavior of MAPL_MaxMin in presence of NaN
  • Fixed bug with return codes and macros in udunits2f

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.51.2...v2.52.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.47.1.3

DOI

This is a tweak patch on top of MAPL 2.47.1.2. This adds the ability to add an option in AGCM.rc to allow MAPL to overwrite checkpoints:

overwrite_checkpoints: .true.

as requested in https://github.com/GEOS-ESM/MAPL/issues/3262.

By default, the capability is default .false which matches current MAPL behavior.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.13 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Added new option to AGCM.rc overwrite_checkpoint to allow checkpoint files to be overwritten. By default still will not overwrite checkpoints

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.1.2...v2.47.1.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.51.2

DOI

This patch release of MAPL 2.51 has a fix when using multiple rules for a vector item in ExtData2G. It also relaxes a restriction that vector regridding in ExtData2G must be bilinear.

This release also moves the CI and Docker to us Ubuntu 24-based base images. This also required a fix in one of the profiler unit tests.

All testing shows this to be zero-diff to v2.51.1

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Changed

  • Removed restriction that vector regridding in ExtData2G must be bilinear
  • Update CI to use Ubuntu 24 images

Fixed

  • Fixed by when using multiple rules for a vector item in ExtData2G
  • Fix profiler ExclusiveColumn test for GCC 14

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.51.1...v2.51.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.51.1

DOI

This is a patch on MAPL 2.51. This release fixes an issue where the per-cell counters in the generic coupler are not initialized properly. They are part of a derived type when gets allocated, but the pointers there are not initialized to NULL.

Testing of GEOS at c24 and c360 shows this to be zero-diff. However, there is the possibility that if you encountered this bug, some output could change.

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Fixed

  • Properly nullified the pointers to the per-grid-cell counters

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.51.0...v2.51.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.51.0

DOI

This release of MAPL has many new updates and changes. Some highlights include:

  • Support for the Intel ifx compiler (including in CI)
    • Note that MAPL Unit tests only work with ifx 2025.0, though 2024.2 can work with GEOSgcm
  • Allow lat-lon grid factory to detect and use CF compliant lat-lon bounds in a file when making a grid
  • Added a call in GenericRefresh to allow GC's refresh method to be called; in support of CICE6 rewind
  • Add ability to use an ESMF_CONFIG_FILE environment variable to specify name of file to pass in pre-ESMF_Initialize options to ESMF (see ESMF Docs for allowed flags)
  • Added commandline options to checkpoint_benchmark.x and restart_benchmark.x to allow for easier testing of different configurations. Note that the old configuration file style of input is allowed via the --config_file option (which overrides any other command line options)
  • Fixed issue of some Baselibs builds appearing to support zstandard. This is not possible due to Baselibs building HDF5 and netCDF as static libraries
  • Preliminary support for llvm-flang
    • NOTE: MAPL does not yet work with llvm-flang. But some updates were added here for development testing.
  • Trajectory sampler: fix a bug when group_name does not exist in netCDF file and a bug that omitted the first time point
  • Fixed a bug where the periodicity around the earth of the lat-lon grid was not being set properly when grid did not span from pole to pole

There are also new build requirements for MAPL 2.51:

  • CMake 3.24
  • ESMF 8.6.1

All tests show this to be zero-diff to MAPL 2.50

This version of MAPL was tested with:

  • Intel Fortran Classic (ifort) 2021.6.0 and 2021.13
  • Intel Fortran (ifx) 2025.0
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.27.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.7.0 (Note: MAPL only requires 8.6.1 at the moment)
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.55.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.24 or higher.

From CHANGELOG.md

Added

  • Added macro _RETURN(_SUCCESS) to fetch_data
  • Allow update offsets of ±timestep in ExtData2G
  • Minor revision (and generalization) of grid-def for GSI purposes
  • Add ability to use an ESMF_CONFIG_FILE environment variable to specify name of file to pass in pre-ESMF_Initialize options to ESMF (see ESMF Docs for allowed flags.
  • Allow lat-lon grid factory to detect and use CF compliant lat-lon bounds in a file when making a grid
  • PFIO/Variable class, new procedures to retrieve string/reals/int attributes from a variable
  • Added a call in GenericRefresh to allow GC's refresh method to be called; in support
    of CICE6 rewind

Changed

  • Change minimum CMake version to 3.24
    • This is needed for f2py and meson support
  • Refactored tableEnd check
  • Added commandline options to checkpoint_benchmark.x and restart_benchmark.x to allow for easier testing of different configurations. Note that the old configuration file style of input is allowed via the --config_file option (which overrides any other command line options)
  • Update ESMF version for Baselibs to match that of Spack for consistency
  • Update components.yaml
    • ESMA_env v4.32.0
      • Baselibs 7.27.0
        • ESMF 8.7.0
        • curl 8.10.1
        • NCO 5.2.8
        • CDO 2.4.4
        • GSL 2.8
        • jpeg 9f
        • Various build fixes
    • ESMA_cmake v3.55.0
      • Fixes for using MAPL as a library in spack builds of GEOSgcm
      • Various backports from v4
      • Code for capturing mepo status output
      • Fixes for f2py and meson (NOTE: Requires CMake minimum version of 3.24 in project for complete functionality)
      • Fixes for MPI_STACK code run multiple times
  • Updates to CI
    • Use v7.27.0 Baselibs
    • Use GCC 14 for GNU tests
    • Add pFUnit-less build test
    • Enable ifx tests
  • Improve some writes to be more informative
    • In base/MAPL_CFIO.F90, added Iam to a print statement so that when a read fails we know which routine failed
    • In gridcomps/ExtData2G/ExtDataConfig.F90, print out the name of the duplicate collection that causes model to fail

Fixed

  • Fixed issue of some Baselibs builds appearing to support zstandard. This is not possible due to Baselibs building HDF5 and netCDF as static libraries
  • Workaround ifx bug in pfio/ArrayReference.F90 (NOTE: This currently targets all versions of ifx, but will need to be qualified or removed in the future)
  • Updates to support llvm-flang
  • Trajectory sampler: fix a bug when group_name does not exist in netCDF file and a bug that omitted the first time point
  • Fixed a bug where the periodicity around the earth of the lat-lon grid was not being set properly when grid did not span from pole to pole

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.50.3...v2.51.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.50.3

This patch release of MAPL 2.50 fixes a bug where c NULL character is not removed from end of string when reading netcdf attribute in NetCDF4_FileFormatter.F90

All testing shows this to be zero-diff to MAPL 2.50.2.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.23 or higher.

From CHANGELOG.md

Fixed

  • Fixed bug where c null character is not removed from end of string when reading netcdf attribute in NetCDF4_FileFormatter.F90

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.50.2...v2.50.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 1 year ago

MAPL - MAPL 2.40.3.1

DOI

NOTE: This is a special tweak release of MAPL 2.40.3. We do not recommend users use this version unless specifically told to.

This version of MAPL is essentialy v2.40.3 but with changes and fixes for ESMF 8.6.1 backported from newer tags. Thus, unlike MAPL 2.40.3, this version requires at least ESMF 8.6.1 (due to CMake changes).

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.6.1
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Backport changes to use ESMF 8.6.1 to 2.40.3
    • Update to use ESMF::ESMF target
    • Update to ESMF 8.6.1 FindESMF.cmake file
    • Remove excessive prints in generic/OpenMP_Support.F90

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.3...v2.40.3.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.50.2

DOI

This patch release of MAPL 2.50 fixes a bug with the placement of a cycle in a coupler loop in History. This bug was exposed in the pert code used in GEOSadas.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.23 or higher.

From CHANGELOG.md

Fixed

  • Fixed bug with cycle placement in coupler loop in History

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.50.1...v2.50.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.47.1.2

DOI

This is a tweak patch on top of v2.47.1.1. It has a fix for a timer bug when using History and the GEOS Pert application.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.13 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Fixed timer bug in History with GEOS pert application

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.1.1...v2.47.1.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.47.1.1

DOI

This is a tweak release on MAPL v2.47.1 with a fix needed for GEOSadas development. It has a minor revision (and generalization) of MAPL_DefGridName for GSI purposes

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.13 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Minor revision (and generalization) of grid-def for GSI purposes

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.1...v2.47.1.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.50.1

DOI

This is a patch release on MAPL 2.50. It fixes an uninitialized variable found when running with GNU and ExtData2G when built with Debugging compiler options.

All tests show this is zero-diff to MAPL 2.50.0.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.23 or higher.

From CHANGELOG.md

Fixed

  • Fixed unitialized variable bug in ExtData exposed by gfortran

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.50.0...v2.50.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.50.0

DOI

This release of MAPL has a fix for using point source emissions with stretched cube-sphere grids. This code was introduced in MAPL 2.45.0 and before this fix, leads to point sources on wrong faces of the cube (see this comment for before-and-after).

Beyond this, we also set the new minimum CMake version required to 3.23 as well as better error trapping.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

We also require CMake 3.23 or higher.

From CHANGELOG.md

Added

  • Added MAPL_Reverse_Schmidt to reverse the stretched grid for indices computation

Changed

  • Propagated the error message from MAPL_HorzIJIndex subroutine
  • Updated minimum CMake version to 3.23

Fixed

  • Trapped more errors from Extdata's i-server

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.49.1...v2.50.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.49.1

DOI

This is a patch release of MAPL 2.49. It fixes erroneous asserts that blocked some use cases when creating route handles.

All testing shows it to be zero-diff to 2.49.0

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8 -- NEW DEPENDENCY FOR MAPL 2.48

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Removed erroneous asserts that blocked some use cases in creating route handles

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.49.0...v2.49.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.46.4

DOI

This is a patch release of MAPL 2.46. It fixes erroneous asserts that blocked some use cases when creating route handles.

This should be zero-diff to 2.46.3.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.45.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Removed erroneous asserts that blocked some use cases in creating route handles

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.46.3...v2.46.4

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.49.0

DOI

This is a minor release of MAPL 2.

The main new functionality is support for zstandard compression in MAPL History. Note that this requires zstandard support built into netCDF (and HDF5). At the moment ESMA-Baselibs cannot exercise this as ESMA-Baselibs builds HDF5 and netCDF as static libraries so the zstandard plugin is not available. But spack builds of MAPL can use the new functionality. MAPL does have a test to make sure zstandard support is available and if not, if someone tries to use it, the system will fail out.

We also have bug fixes for macOS and NVHPC in this release.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8 -- NEW DEPENDENCY FOR MAPL 2.48

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Added zstandard compression support
    • Note this requires netCDF-C to have been compiled with zstandard support. We have a CMake test to check for this and enabling zstandard output in History will fail if the library does not support it

Changed

  • ExtDataDriver.x now uses ExtData2G by default
  • Update components.yaml
    • ecbuild geos/v1.4.0
      • Fixes bug between GCC, macOS, and the -pipe flag

Fixed

  • Workaround for NVHPC 24.9 involving use statement in block construct

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.48.0...v2.49.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.48.0

DOI

This is a minor release of MAPL. It has various updates and fixes compared to MAPL 2.47. All testing shows it to be zero-diff to MAPL 2.47.

The complete list of changes is delineated below but some highlights are:

  • Support for GCC 14 and Intel 2021.13
  • Added Fortran interface to UDUNITS2
    • NOTE: This now means MAPL depends on UDUNITS2 (and transitively, expat)
  • Added 5 new ExtData tests to test compression, bit-shaving, and quantization
  • Add restart benchmark code restart_simulator.x in benchmark directory
  • Start implementing changes for vertical regridding in ExtData
  • Made the POSITIVE field attribute defaults to "down" in case it is not found
  • Added ability to read the attribute with explicit type "string" of a netcdf variable.
  • Add support for preliminary CF Conventions quantization properties

Note the with the last point, we added a new quantization keyword granular_bitround to History. This will be the preferred keyword for quantization in the future replacing GranularBR (which we formally deprecated and will remove in MAPL3).

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 and 2021.13 (Note: ifx does not yet work)
  • GCC 13.2.0 and 14.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.25.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1
    • GFE 1.16.0
      • gFTL 1.14.0
      • gFTL-shared 1.9.0
      • pFUnit 4.10.0 (optional)
      • fArgParse 1.8.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
    • UDUNITS2 2.28.8 -- NEW DEPENDENCY FOR MAPL 2.48

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.51.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Added 5 new ExtData tests to test compression, bit-shaving, and quantization

Changed

  • Rename all single-digit ExtData tests to have a leading zero (i.e., case1 -> case01)
  • Add restart benchmark code restart_simulator.x in benchmark directory
  • Start implementing changes for vertical regridding in ExtData
  • Made the POSITIVE field attribute defaults to "down" in case it is not found
  • VLOCATION is not querried in MAPL_VerticalMethods.F90 for rank 2 fields
  • Fixed time print in Cap GC (from slashes to colons)
  • Added ability to read the attribute with explicit type "string" of a netcdf variable.
  • Add ability to connect export of the MAPL hierachy to ExtData via CAP.rc file
  • Added new driver, CapDriver.x, to excerise the MAPL_Cap with the configuratable component also used by ExtDataDriver.x
  • Added Fortran interface to UDUNITS2
    • NOTE: This now means MAPL depends on UDUNITS2 (and transitively, expat)
  • Improve mask sampler by adding an MPI step and a LS_chunk (intermediate step)
  • CI Updates
    • Update Baselibs in CI to 7.25.0
    • Update to circleci-tools orb v4
      • This adds the ability to do an ifx test along with the ifort test (though ifx is not yet enabled)
  • Update components.yaml
    • ESMA_env v4.30.1
      • Update to Baselibs 7.25.0
        • ESMF 8.6.1
        • GFE v1.16.0
          • gFTL v1.14.0
          • gFTL-shared v1.9.0
          • fArgParse v1.8.0
          • pFUnit v4.10.0
          • yaFyaml v1.4.0
        • curl 8.8.0
        • NCO 5.2.6
        • Other various fixes from the v8 branch
      • Move to use Intel ifort 2021.13 at NCCS SLES15, NAS, and GMAO Desktops
      • Move to use Intel MPI at NCCS SLES15 and GMAO Desktops
      • Move to GEOSpyD Min24.4.4 Python 3.11
      • Fix for csh at NAS
    • ESMA_cmake v3.51.0
      • Update esma_add_fortran_submodules function
      • Move MPI detection out of FindBaselibs
      • Add SMOD to submodule generator
      • NAG OpenMP Workaround
      • Support for Jemalloc and LLVM Flang
  • Add support for preliminary CF Conventions quantization properties
    • Add new quantization keyword granular_bitround to History. This will be the preferred keyword for quantization in the future
      replacing GranularBR

Fixed

  • Fix profiler PercentageColumn test for GCC 14
  • Fix bug in ExtData Tests. CMake was overwriting the EXTDATA2G_SMALL_TESTS LABEL with ESSENTIAL

Deprecated

  • Deprecate GranularBR as a quantization method keyword in History. We will prefer granular_bitround in the future to match
    draft CF conventions. This will be removed in MAPL 3.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.2...v2.48.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 2 years ago

MAPL - MAPL 2.47.2

DOI

This is a patch release of MAPL 2.47. It fixes a bug when using externally initialized MPI.

Notice to users: External code should initialize MPI with MPI_THREAD_MULTIPLE as that is what MAPL expects. Also, code might need to call:

call ESMF_InitializePreMPI()

for all features of MAPL to be supported, namely if ESMF Single System Image (SSI) code is enabled. If users do not use this (or know what it is), it most likely is not needed.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.13 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fix bug in supporting externally initialized MPI

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.1...v2.47.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 years ago

MAPL - MAPL 2.46.3

DOI

This is a patch release of MAPL 2.46. It fixes a bug when using externally initialized MPI.

Notice to users: External code should initialize MPI with MPI_THREAD_MULTIPLE as that is what MAPL expects. Also, code might need to call:

call ESMF_InitializePreMPI()

for all features of MAPL to be supported, namely if ESMF Single System Image (SSI) code is enabled. If users do not use this (or know what it is), it most likely is not needed.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.45.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fix bug in supporting externally initialized MPI

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.46.2...v2.46.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 years ago

MAPL - MAPL 2.47.1

DOI

This is a patch release of MAPL 2.47. It fixes a bug in FieldSet routines when passing R8 ESMF fields

This is zero-diff to MAPL 2.47.0

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.13 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed bug in FieldSet routines when passing R8 ESMF fields

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.47.0...v2.47.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 years ago

MAPL - MAPL 2.47.0

DOI

This is a minor release of MAPL. It has various fixes and updates compared to MAPL 2.46 including:

  • Add new option to Regrid_Util.x to write and re-use ESMF pregenerated weights
  • Add capability to mangle LONG_NAME in ACG with a different prefix
  • Updated checkpoint_simulator to not create and close file if not writing
  • Improved timing for station sampler with GHCNd input: used LocStream with CS background, LS with uniform distributed points, and MPI_GatherV
  • Update ExtData tests to add new category of SLOW tests that take 10-30 seconds and remove them from the ESSENTIAL label
  • Bug fixes for NVHPC

All testing shows this is zero-diff to MAPL 2.46

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use (at least):

  • ESMA_cmake v3.46.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Add new option to Regrid_Util.x to write and re-use ESMF pregenerated weights
  • If file path length exceeds ESMF_MAXSTR, add _FAIL in subroutine fglob
  • Add GNU UFS-like CI test
  • Add capability to mangle LONG_NAME in ACG with a different prefix

Changed

  • pFIO Clients don't send "Done" message when there is no request
  • Update components.yaml
    • ESMA_cmake v3.46.0
      • Fix bugs in meson detection
      • Fix for building on older macOS
      • Add esma_add_fortran_submodules function
  • Updated checkpoint_simulator to not create and close file if not writing
  • Update ExtData tests
    • Add new category of SLOW tests that take 10-30 seconds and remove them from the ESSENTIAL
      label run in CI
    • Remove ExtData1G tests from ESSENTIAL label, but run them in the UFS-like CI test
  • Improved timing for station sampler with GHCNd input: used LocStream with CS background, LS with uniform distributed points, and MPI_GatherV

Fixed

  • Fixed a bug in generate_newnxy in MAPL_SwathGridFactory.F90 (NX*NY=Ncore)
  • Fixes for NVHPC 24.5
    • Convert MAPL_GeosatMaskMod to "interface-in-both-files" submodule style

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.46.2...v2.47.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 years ago

MAPL - MAPL 2.46.2

This is a patch release of MAPL 2.46. This release removes excessive print statements in generic/OpenMP_Support.F90 (see #2853).

As all that is different is removal of print statements, this is trivially zero-diff to MAPL 2.46.1

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.45.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Removed

  • Remove excessive print statements in generic/OpenMP_Support.F90

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.46.1...v2.46.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 2 years ago

MAPL - MAPL 2.40.5

DOI

This is a patch release on MAPL 2.40 which removes some print statements when using the MAPL OpenMP support (see #2853).

As all this does is remove prints, this is trivially zero-diff to MAPL v2.40.4

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Removed

  • Remove extra print statement in generic/OpenMP_Support.F90

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.4...v2.40.5

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.8.0.10

DOI

This is a tweak release on MAPL 2.8.0.9 which adds support for Python3 for use in older tags.

From CHANGELOG.md

Changed

  • Backport Python3 changes for Python/ code to 2.8
  • Change shebang in Apps/MAPL_GridCompSpecs_ACG.py to use python3

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.8.0.9...v2.8.0.10

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.46.1

DOI

This patch release of MAPL 2.46 updates the ESMA_cmake version in components.yaml to v3.45.1. This release fixes a bug in f2py3 handling for detecting when to use meson vs distutils for f2py use.

It is zero-diff to MAPL 2.46.0

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.45.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Update components.yaml to avoid f2py error with python 3.11
    • ESMA_cmake v3.45.1
      • Fix bug in meson detection

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.46.0...v2.46.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.46.0

DOI

This release of MAPL has fixes for non-Baselibs (aka Spack) builds of MAPL. With MAPL 2.44 and 2.45 spack builds were broken due to odd CMake issues.

With this release, spack install mapl will work again (once the spack mapl package is updated). Note that spack builds of MAPL 2.46 require building with ESMF 8.6.1 at least. (ESMF 8.6.1b04 also works).

Baselibs builds of MAPL (and GEOSgcm) do not have any issues and all testing shows this to be zero-diff to MAPL 2.45

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.24.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.1b04 (8.6.0 is enough for Baselibs builds, but 8.6.1 is required for Spack)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.45.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Update FindESMF.cmake to match that in ESMF 8.6.1

Changed

  • Set required version of ESMF to 8.6.1
  • Update components.yaml
    • ESMA_cmake v3.45.0
      • BUILT_ON_SLES15 set to FALSE on NCCS if not built on SLES15
      • Update FindESMF.cmake to match that in ESMF 8.6.1
      • Suppress remarks in Intel Fortran Classic 2021.12
    • ESMA_env v4.29.0 (Baselibs 7.24.0)
      • Update to ESMF 8.6.1b04
      • NCO 5.2.4
      • curl 8.7.1

Fixed

  • Fixed non-Baselibs build using ESMF::ESMF target

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.45.0...v2.46.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.45.0

DOI

This release of MAPL has many updates and fixes. Among the highlights are:

  • Fix inconsistency in History cubed-sphere output where multi-dimensional coordinate variables are also compressed if requested in the collection
  • Removed unnecessary memory allocation for tile reads. This is critical for high res runs on SCU17
  • Add new per-collection timer output for History
  • New SPLIT_CHECKPOINT option replacing the write-by-face option. This will write a file per writer
  • Various fixes and additions for trajectory, swath and station work
  • Allow arithmetic operations to be performed on fields from bundles in History
  • Added two options, depends_on and depends_on_children, to ACG
  • Support for GCC 13 and NAG 7.2 (with GFE v1.15.0)
  • And many many more (see below)

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.12 seems to work, ifx does not yet work)
  • GCC 13.2.0
  • NAG 7.2

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.44 and earlier, namely GFE

  • Baselibs 7.23.0
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.0 (required)
    • GFE 1.15.0
      • gFTL 1.13.0
      • gFTL-shared 1.8.0
      • pFUnit 4.9.0 (optional)
      • fArgParse 1.7.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.14.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.44.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Add glob function in sampler code, supporting wild character, e.g., filename template = amsr2_gcom-w1.%y4%m2%d2T%h2%n2*.nc4
  • Checked resource for o-server. It quits if the numer requested is inconsistent with being used
  • Replace local HorzIJIndex sear with the GlobalHorzIJindex search
  • Change grd_is_ok function to avoid collective call
  • Allow fields with ungridded dimension and bundles to be created in ExtDataDriver.x
  • Allow arithmetic operations to be performed on fields from bundles in History
  • Adapted subroutine RegridVector from GriddedIO.F90 to MAPL_EpochSwathMod.F90 (changing class name for this)
  • Give informative error message when swath grid Epoch does not equal swath sampler frequency
  • Add mask sampler for geostationary satellite (GEOS-R series)
  • Add geostation name into NC for station sampler
  • Add mapping between the IODA loc_index and trajectory NC output loc_index
  • Add allocate(X, _STAT) to sampler codes
  • Skip destroy_regen_grid when list(n)%end_alarm is active (the last time step in sampler)
  • Add extract_unquoted_item(STR1) to fix a bug in geoval_xname(mx_ngeoval) in trajectory sampler
  • Add if (compute_transpose) to sub. destroy_route_handle to avoid destroying a nonexisting route handle
  • Add option to MAPL regridding layer to write and retrieve ESMF weights.
  • Add options to History and ExtData to turn on the ability to write and read route handle weights
  • Add option to renable the transpose computation when calling make_regridder
  • Added procedures to remove an attribute from a FileMetadata object and from a Variable object in PFIO
  • Add per-collection timer output for History
  • Add python utilities to split and recombine restarts
  • Add a new "SPLIT_CHECKPOINT:" option that has replaced the write-by-face option. This will write a file per writer
  • Implemented a new algorthm to read tile files
  • Added two options, depends_on and depends_on_children, to ACG
  • Add CI job to test Ford build (does not publish)

Changed

  • Release the pfio memory as early as possible
  • Trajectory sampler: ls_rt -> ls_chunk (via mpi_gatherV) -> ls_distributed(bk=cs_grid; via ESMF_FieldRedistStore), aiming to save computational time. To gather 3D data via mpi, options for level by level and single-3D are added via ifdef.
  • The MAPL_ESMFRegridder manage now does compute the transpose by default
  • Bypassed the I-Server reading call when there is no extdata
  • Created new ESSENTIAL ctest label for tests that must pass for a release
    • These are "simple" quick tests that don't require a lot of resources
    • With ESMA_cmake v3.43.0, make tests will only run tests with the ESSENTIAL label. To run all tests, use make tests-all
  • Update components.yaml
    • ESMA_cmake v3.43.0
      • Updates to MPI detection
      • Enable -quiet flag for NAG
      • make tests now only runs tests with the ESSENTIAL label. To run all tests, use make tests-all
      • BUILT_ON_SLES15 set to FALSE on NCCS if not built on SLES15
    • ESMA_env v4.28.0 (Baselibs 7.23.0)
      • Updates to GFE v1.15
      • Fixes for NAG
      • Use GCC 11.4 as Intel backing compiler at NCCS SLES15
  • Update CI to use Baselibs 7.23.0 and GCC 13.2 for GNU tests

Fixed

  • Change to IntArray's pointer to store data to avoid Intel Ifort bug
  • Fix inconsistency in History output so that multi-dimensional coordinate variables are also compressed if requested in the collection
  • Minor workaround to enable NAG 7.2.01 to compile. (Reproducer submitted to NAG.)
  • Fixed bug with split restart files
  • Removed unnecessary memory allocation for tile reads. This is critical for high res runs on SCU17
  • Fixes to allow SCM model to run

Removed

  • Removed CMake logic for macOS + Intel as that is an unsupported configuration

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.44.3...v2.45.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.44.3

DOI

This is a patch release of MAPL 2.44 which fixes a unit test. This is zero-diff to MAPL 2.44.2 and should have no effect on users of MAPL.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.43 and earlier, namely ESMF and GFE

  • Baselibs 7.17.2
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.0 (required)
    • GFE 1.12.0
      • gFTL 1.11.0
      • gFTL-shared 1.7.0
      • pFUnit 4.8.0 (optional)
      • fArgParse 1.6.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.11.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.40.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • The bundle I/O unit test was failing on NAG. Partly due to an untrapped return code, but also some weird issue with setting values in ESMF Config. Probably not a bug in the compiler but something in ESMF or MAPL handling line continuations.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.44.2...v2.44.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.44.2

DOI

This is a patch release of MAPL 2.44. This release fixes a bug with time_ave_util.x when the input files have a level size of 1.

This is trivially zero-diff for GEOSgcm to MAPL 2.44.1 as it only affects this utility.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.43 and earlier, namely ESMF and GFE

  • Baselibs 7.17.2
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.0 (required)
    • GFE 1.12.0
      • gFTL 1.11.0
      • gFTL-shared 1.7.0
      • pFUnit 4.8.0 (optional)
      • fArgParse 1.6.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.11.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.40.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed bug in time_ave_util.x when the input files have a level size of 1

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.44.1...v2.44.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.44.1

This is a patch release of MAPL 2.44. This release fixes a bug where bit-shaved, instantaneous binary output in History was modifying the original export state passed.

Note this means that if you were outputting bit-shaved instantaneous History output, this possibly could be non-zero-diff (if one of the exports in this collection was not purely diagnostic). We have only seen this with GEOSldas, the GEOSgcm does not usually output binary history.

This version of MAPL was tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.43 and earlier, namely ESMF and GFE

  • Baselibs 7.17.2
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.0 (required)
    • GFE 1.12.0
      • gFTL 1.11.0
      • gFTL-shared 1.7.0
      • pFUnit 4.8.0 (optional)
      • fArgParse 1.6.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.11.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.40.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fix bug where bit-shaved, instantaneous binary output in History was modifying the original export state passed

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.44.0...v2.44.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.44.0

DOI

This release of MAPL has many new features and fixes. Among the new features and fixes are:

  • Various improvements to History "Samplers" that sample model data at geolocations of simulated instruments. These include support for both trajectories (time dependent lat/lon) and swaths (time-dependent scans)
  • Added memory utility, MAPL_MemReport that can be used in any code linking MAPL
  • Added capability in the MAPL ESMF regridding wrapper to apply a destination mask if the destination grid contains a mask
  • Updates for using MAPL with GEOS in a hybrid MPI+OpenMP paradigm
  • Various fixes for NVHPC work

Also, with this version of MAPL, we now require ESMF 8.6.0 as MAPL now uses functionality only supported in that version. Moreover, all references to ESMF as a CMake target are now done as ESMF::ESMF. This is supported in Baselibs build with ESMA_cmake v3.40.0 (required for Baselibs builds) and for non-Baselibs builds (i.e., spack) via a newer FindESMF.cmake file (currently from ESMF develop and will be in ESMF 8.6.1+).

Note though that builds using MAPL and using Baselibs (aka as GEOSgcm is currently run) are not required to move to the ESMF::ESMF target everywhere. ESMA_cmake adds aliases so that esmf, ESMF and ESMF::ESMF are all supported. The change to ESMF::ESMF was for external users who found that MAPL was bringing in ESMF as a target, but ESMF was not available so CMake was then added -lESMF to link lines which caused failures.

MAPL is currently tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below. NOTE: Changes here from MAPL 2.43 and earlier, namely ESMF and GFE

  • Baselibs 7.17.2
    • netcdf-c 4.9.2
    • netcdf-fortran 4.6.1
    • ESMF 8.6.0 (required)
    • GFE 1.12.0
      • gFTL 1.11.0
      • gFTL-shared 1.7.0
      • pFUnit 4.8.0 (optional)
      • fArgParse 1.6.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.11.0 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with Baselibs and/or -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.40.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Added nf90 interface to read and write 1d string
  • Convert from ABI Fixed Grid to lon/lat coordinates used in MAPL_XYGridFactory (supporting geostationary GOES-R series)
  • Modify trajectory sampler for a collection with multiple platforms: P3B (air craft) + FIREX
  • Modify swath sampler to handle two Epoch swath grids
  • Handle regrid accumulate for time step (1 sec) during which no obs exists
  • Use IntState%stampoffset(n) to adjust filenames for an epoch time
  • parse "GOCART::CO2" from 'geovals_fields' entry in PLATFORM
  • Add call MAPL_InitializeShmem to ExtDataDriverGridComp.F90
  • Read swath data on root, call MAPL_CommsBcast [which sends data to Shmem (when Shmem initialized) or to MAPL_comm otherwise]. This approach avoids race in reading nc files [e.g. 37 files for 3 hr swath data]
  • Added memory utility, MAPL_MemReport that can be used in any code linking MAPL
  • Added capability in XY grid factory to add a mask to the grid any points are missing needed for geostationary input data
  • Added capability in the MAPL ESMF regridding wrapper to apply a destination mask if the destination grid contains a mask
  • Added INSTALL.md file to provide instructions on how to install MAPL

Changed

  • Updated ESMF required version to 8.6.0
  • Allocate gridded fields to use the pinflag option needed for the Single System Image (SSI) capability.
  • Made changes to allocate fields to use farray instead of farrayPtr. This allows explicit specification of indexflag required by the new MAPL field split functionality. This functionality allows a clean way to create a new field from an exiting field where the new field is a 'slice' of the existing field with the slicing index being that of the trailing ungiridded dim of the existing field.
  • Replaced RC=STATUS plus _VERIFY(RC) in Base_Base_implementation.F90 with just _RC in line with our new convention.
  • Updated CI to use Open MPI 5.0.0 for GNU
  • Enable Ninja for CI builds of MAPL
  • Removed use of ESMF_HAS_ACHAR_BUG CMake option and code use in MAPL_Config.F90. Testing has shown that with ESMF 8.6 (which is
    now required), NAG no longer needs this workaround.
  • Refactor the CircleCI workflows for more flexibility
  • Fix field utils issue - add npes argument to test subroutine decorators.
  • Change MAPL CMake to use ESMF::ESMF target instead of esmf or ESMF as the imported target name
    • Updated FindESMF.cmake to match that of ESMF develop as of commit da8f410. This will be in ESMF 8.6.1+
    • Requires ESMA_cmake 3.40.0 or later as this adds the ESMF::ESMF target ALIAS for Baselibs and non-Baselibs builds
  • Changed CMakePresets.json
    • Updated to version 7 and required CMake 3.27.0 (the minimum version that supports CMakePresets.json v7)
    • Changed build style on NCCS machines to by default put build and install directories in a user-specified directory so as not to
      pollute swdev

Fixed

  • Restore missing submodule interfaces
  • Explictly use some iso_c_binding types previously pulled in through ESMF. This is fixed in future ESMF versions (8.7+) and so
    we anticipate this here
  • Add explicit Fortran_MODULE_DIRECTORY to CMakeLists.txt in benchmarks to avoid race condition in Ninja builds
  • Add check to make sure ESMF was not built as mpiuni
  • Fixed failing tests for field_utils.
  • Various fixes for NVHPC work

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.43.2...v2.44.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.43.2

DOI

This is a hotfix on MAPL 2.43 which fixes a memory leak affecting regional masking. Temporary ESMF field was created but never destroyed.

This is zero-diff to MAPL 2.43.1

MAPL is currently tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed memory leak affecting regional masking. Temporary ESMF field was created but never destroyed

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.43.1...v2.43.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.43.1

DOI

This is a hotfix for MAPL 2.43 which fixes an issue with PFIO when client root process passes no data AND using multi group server (see #2557).

MAPL is currently tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Added 0-size message to o-server root processes (fixes #2557)

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.43.0...v2.43.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.43.0

DOI

This is a minor release of MAPL. It has various updates and fixes as delineated below. Some highlights are:

  • Updates for ongoing work with trajectory and station sampling
  • Examples on how to use the Automatic Code Generator
  • Fixes for use of the MAPL Python code with Python 3
  • Fixes for GCC 13 which is still NOT SUPPORTED but this allows for further testing
  • Fix to allow ExtData2G to be built as static library

MAPL is currently tested with:

  • Intel Fortran Classic 2021.6.0 (Classic 2021.10.0 seems to work, ifx does not yet work)
  • GCC 12.3.0 (13 not supported)
  • NAG 7.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Station sampler: add support to Global Historical Climatology Network Daily (GHCN-D)
  • Add to trajectory sampler DEFINE_OBS_PLATFORM for reading multiple IODA files. To do this, we add union_platform function for observation.
  • New directory (docs/tutorial/grid_comps/automatic_code_generator) containing an example showing how to automatically generate the source code using the MAPL_GridCompSpecs_ACG.py tool.
  • Added/modified a few _ASSERT calls in ExtData, to better explain what is wrong in .yaml file

Changed

  • Change the verification of the grid in MAPL_GetGlobalHorzIJIndex to avoid collective call
  • Swath grid step 1: allow for destroying and regenerating swath grid and regenerating regridder route handle, and creating
    allocatable metadata in griddedIO. Modifications are made to GriddedIO.F90, MAPL_AbstractRegridder.F90, and MAPL_EsmfRegridder.F90.
  • Swath grid step 2: add control keywords for swath grid. Allow for filename template with DOY. Allow for missing obs files. User needs to specify index_name_lon/lat, var_name_lon/lat/time, tunit, obs_file_begin/end/interval, Epoch and Epoch_init.
  • Update CI to Baselibs 7.17.0 (for future MAPL3 work) and the BCs v11.3.0 (to fix coupled run)
  • Update components.yaml
    • ESMA_env v4.24.0 (Baselibs 7.17.0)
  • Update CI to use circleci-tools v2
  • Changed the Python MAPL __init__.py file to restore behavior from pre-Python3 transition where we did from foo import *. Also fix up other Python2 code to Python3.

Fixed

  • Fixed bug broken multi-step file output in History under certain template conditions
  • [#2433] Implemented workarounds for gfortran-13
  • Missing TARGET in GriddedIO - exposed runtime error when using NAG + debug.
  • Allow ExtData2G to be built as SHARED or STATIC

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.42.4...v2.43.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.42.4

This is a patch release of MAPL 2.42. It fixes issues found by NAG in our unit tests.

All testing shows it zero-diff to MAPL 2.42.3

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Improved error message for missing labels in GridManager.

Fixed

  • Corrected some unit tests (and test utilities) to fix dangling pointers detected by NAG. Most (possibly all) of these changes are already on release/MAPL-v3, but it was getting annoying to have NAG fail unit tests with develop branch.
  • Fix for CMake an Apple. Needs to set __DARWIN as an fpp flag. (Only used by NAG, but ...)

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.42.3...v2.42.4

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.42.3

DOI

This is a patch release of MAPL 2.42. It fixes an issue with MAPL_Abort() which was passing an uninitialized integer to MPI_Abort() resulting in spurious false successes when running ctest.

This is zero-diff to MAPL 2.42.2

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • MAPL_Abort() was passing an uninitialized integer to MPI_Abort() resulting in spurious false successes when running ctest. Maybe was happening frequently, but CI would be blind to this.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.42.2...v2.42.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.42.2

DOI

This is a patch release of MAPL 2.42 with fixes for the NAG compiler.

All changes show zero-diff for GEOSgcm compared to MAPL 2.42.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Corrected some unit tests (and test utilities) to fix dangling pointers detected by NAG. Most (possibly all) of these changes are already on release/MAPL-v3, but it was getting annoying to have NAG fail unit tests with develop branch.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.42.1...v2.42.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 2 years ago

MAPL - MAPL 2.42.1

DOI

This is a patch release of MAPL 2.42 which fixes a missing USE statement for C_PTR in FieldPointerUtilities.F90

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Inserted missing USE statement for C_PTR in FieldPointerUtilities.F90

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.42.0...v2.42.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.42.0

DOI

This is a minor release of MAPL. There are many new fixes and additions to this release including:

Changes

  • Various workarounds for building MAPL with MPICH
  • Added a new benchmark to simulate writing a cubed-sphere file using various tunable strategies
  • Update to components.yaml
    • ESMA_cmake v3.36.0 (Support for SLES15 at NCCS, support for Intel 2021.10)
    • ESMA_env v4.20.5 (Support for SLES15 at NCCS)

Fixes

  • Introduced workaround for Intel 2021.10 bug in generic layer.
  • Updated write_by_oserver logic so that the decision to write by the oserver is based on whether the output server client is passed in
  • Fixed incorrect History print during runtime

All testing show it is zero-diff to MAPL 2.41.

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Various workarounds for building MAPL with MPICH
    • Non-support for C_PTR in MPI_Alloc_Mem ((MPICH Issue #6691)[https://github.com/pmodels/mpich/issues/6691])
    • Non-support for ierror keyword arguments with use mpi ((MPICH Issue #6693)[https://github.com/pmodels/mpich/issues/6693])
  • Add new benchmark to simulation writing a cubed-sphere file using various tunable strategies

Changed

  • Modified fpp macro _UNUSED_DUMMY(x) to use ASSOCIATE instead of PRINT. With this change it can be used in PURE procedures.
  • Make error handling in Plain_netCDF_Time consistent with MAPL standard error handling
  • Extend unit tests for FileSystemUtilities.
  • Updated handling of NetCDF time values
  • Update components.yaml
    • ESMA_cmake v3.36.0 (Support for SLES15 at NCCS, support for Intel 2021.10)
    • ESMA_env v4.20.5 (Support for SLES15 at NCCS)

Fixed

  • Introduced workaround for Intel 2021.10 bug in generic layer.
  • Updated write_by_oserver logic so that the decision to write by the oserver is based on whether the output server client is passed in
  • Updated CI GEOSadas build to use special branch (as stock ADAS at the moment is too far behind GEOSgcm main)
  • Fix incorrect History print during runtime

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.41.2...v2.42.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.41.2

DOI

This patch release of MAPL 2.41 fixes a missing initialize of pFlogger in pfio test.

All tests show this is zero-diff to MAPL 2.41.1

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed missing initialize of pFlogger in a pfio test. Not clear why this was not failing for other compilers - detected with ifort 2021.10.0.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.41.1...v2.41.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.41.1

DOI

This is a patch release of MAPL 2.41. It fixes a missing status check when reading import checkpoint in MAPL_GenericInitialize

It is zero-diff to MAPL 2.41.0

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Adding missing check on the return status when reading import checkpoint in MAPL_GenericInitialize

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.41.0...v2.41.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.41.0

This is a minor release of MAPL with many changes and fixes to MAPL 2.40. Prominent updates include:

  • Updates for ongoing trajectory sampling work
  • Updates and improvements to documentation
  • Changes to MAPL_Resource.F90 to allow NVIDIA compilers to build this file
  • Adding a new benchmark suite
  • Cleaning up much of the code to reduce compiler warnings and remarks at compile time:
    • Converted all uses of mpif.h to use mpi
    • Converted all uses of character* to character(len=)
    • Removed many unused variables
    • Added many _UNUSED_DUMMY() calls
    • Converted statement functions to internal functions
  • and more as noted in the CHANGELOG.md below

All tests show this to be zero-diff to MAPL 2.40

The libraries this version of MAPL is currently tested with are below.

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you should use:

  • ESMA_cmake v3.34.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Saved weights and points for the vertical interpolation
  • Added new benchmark suite. Initial benchmarks are:
    1. measuring raw bandwidth of a filesystem with multiple independent streams
    2. measuring the MPI_Gatherv() used in writing checkpoints.
    3. a combo benchmark that does both operations
  • Added the ability to read string attributes of variables. This is as opposed to "character" attributes - a distinction made by NetCDF. Previously a small kludge had been used to allow reading string attributes, but was limited to attributes on the global var.
  • Added markdown documentation for select items such as ExtData, History and a few other sources
  • Trajectory sampler with Epoch time span
  • Added utility to convert binary files used by MAPL_ReadForcing to NetCDF
  • Allow a negative "update_offset" keyword in the sampling section of ExtData2G's input file by prepending the ISO time duration with a negative sign. I.E -PT12H for example
  • Added three new macros
    • _HERE: Returns the current file and line number
    • _RETURN_IF(cond): Returns if the condition is true
    • _RETURN_UNLESS(cond): Returns if the condition is false
  • Created a new docs directory that has the following subdirectories
    • tutorial: what used to be a top directory (with the same content)
    • user_guide: a new directory that will serve as MAPL User's Guide.
  • OSSE project: trajectory sampler (regrid to IODA file locations), capable of ingesting multiple files and regridding via one route-handle

Changed

  • Converted hinterp.F to free format (hinterp.F90)
  • Modified tilegrid creation to use index flag ESMF_INDEX_DELOCAL instead of ESMF_INDEX_USER
  • Renamed "geom" subdir and library to "field_utils"
  • Updated CircleCI to use v11.2.0 bcs
  • Backported changes in pfio from release/MAPL-v3 to enable pfio unit tests
  • Update components.yaml
    • ESMA_cmake v3.34.0 (Support for Intel Fortran under Rosetta2, updated NAG flags)
  • Cleanup Fortran
    • Converted all uses of mpif.h to use mpi
    • Converted all uses of character* to character(len=)
    • Removed many unused variables
    • Added many _UNUSED_DUMMY() calls
    • Converted statement functions to internal functions
  • Lowered optimization of ExtDataGridCompMod.F90 and ExtDataGridCompNG.F90 to -O1 on Intel to speed build

Fixed

  • Fixed the lines order to get the right idle_worker in MultiGroupServer.F90
  • Corrected a typo for checking if fpp macro _FILE_ was previously defined.
  • Add call to initialize pFlogger layer for the unit tests.
  • Rename mpi_comm to comm in MAPL_HistoryGridComp.F90 to avoid GNU
    • MPT bug at NAS
  • Fix problem with macros in base/MAPL_Resource.F90 uncovered while compiling with the NVIDIA Fortran compiler.
    The macros in MAPL_Resource.F90 had long lines which exceeded the line length limit of the NVIDIA compiler.
    Change the macros into include files (.h) with macros and Fortran code.

Removed

  • Deleted MAPL_HeapMod.F90. This file was doing crazy nonstandard things and is not used anywhere else. A new cleaner implementation based upon containers could be readily created if the functionality is ever missed.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.4...v2.41.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.40.4

DOI

This is a patch release of MAPL 2.40 which has a attempted fix for using MAPL-as-a-library via find_package(MAPL). The issue seemed to be due to not having any find_dependencies() calls in the resulting mapl-import.cmake file created on installation so MAPL itself did not describe what it needed correctly.

This is zero-diff to v2.40.3

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed handling of MAPL dependencies for when find_package(MAPL) is used

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.3...v2.40.4

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 almost 3 years ago

MAPL - MAPL 2.40.3

DOI

This patch release of MAPL 2.40 has fixes for using the NAG compiler on Linux. MAPL 2.40.1 broke NAG compatibility with Linux when fixing for macOS. When using the NAG compiler with MAPL 2.40.3, you must use ESMA_cmake v3.31.1 as well for the right flags. Note that for Intel and GNU, this is a no-op change.

All tests show zero-diff to MAPL 2.40.2

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.1

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Update components.yaml
    • ESMA_cmake v3.31.1 (Fixes for NAG)

Fixed

  • Undoing previous workaround for NAG + MAPL_Config.F90 in v2.40.1 which was a workaround was not portable to Linux. Instead, this uses changes in ESMA_cmake v3.31.1 for flags with NAG.
  • Updated FindESMF.cmake file to match that of ESMF v8.5.0

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.2...v2.40.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.40.2

DOI

This is a patch release of MAPL 2.40 which fixes some missing TARGET attributes in some code detected by the NAG compiler.

All tests show it zero-diff to MAPL 2.40.0

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed missing TARGET attribute on dummy argument. NAG aggressively uses copy-in/copy-out which exposes these missing attributes. This fix probably did not find all - just the ones exercised by one failing test.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.1...v2.40.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.40.1

DOI

This patch release of MAPL 2.40 has a minor workaround for using NAG which prevents reading values from ESMF Config files that have been set using SetAttribute().

All tests show it to be zero-diff to MAPL 2.40.0

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Workaround for NAG which prevents reading values from ESMF Config files that have been set using SetAttribute(). The immediate issue appears to be due to a wrong CPP conditional on `ESMF_HAS_ACHAR_BUG', but it is not immediately clear if this is due to recent changes in ESMF or some change in NAG. Probably ESMF though. Once the ESMF core team analyzes we will potentially update this fix.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.40.0...v2.40.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.40.0

DOI

This minor release of MAPL includes many new features as well as new requirements for building.

The main new feature is the ability of ExtData to now fill variables on MAPL "tile" grids as well as the ability for ExtDataDriver.x to run on "tile" grids.

Also, with this version of MAPL, we now require ESMF 8.5.0 because MAPL has now replaced yaFyaml for YAML support with ESMF_HConfig. Per the release notes:

One major new development available with 8.5.0 is the addition of a hierarchical configuration class: ESMF_HConfig. This class provides YAML 1.2 support through the ESMF Fortran API. The ESMF_HConfig class integrates with the existing configuration class ESMF_Config for backward compatibility, and allows ESMF user code to seamlessly access, modify, and create information in YAML format. This new capability is leveraged within ESMF and NUOPC to provide a YAML alternative when specifying ESMF_Initialize() parameters, NUOPC attribute, petList, or run sequence information.

Note that MAPL 2.40 now has new requirements for building. MAPL now requires:

  • ESMF 8.5.0
  • gFTL 1.10.0
  • gFTL-shared 1.6.1
  • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
  • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)

Of these, only ESMF and gFTL-shared are hard "code will not build" requirements. However, the other GFE libraries minimum versions were updated to latest versions to capture bugfixes.

Also, since we now use ESMF_Hconfig for YAML support in MAPL, yaFyaml is no longer used. Likewise, we have deprecated FLAP use and by default BUILD_WITH_FLAP is NO.

The libraries this version of MAPL is currently tested with are below. (This is a change since MAPL 2.39)

  • Baselibs 7.14.0
    • netcdf-c 4.9.2 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.1 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.5.0 (required)
    • GFE 1.11.0
      • gFTL 1.10.0
      • gFTL-shared 1.6.1
      • pFUnit 4.7.3 (optional)
      • fArgParse 1.5.0 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.5 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=NO)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.31.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Add ability of ExtData to fill variables on MAPL "tile" grids.
  • Added print of regrid method during History initialization
  • Added ability to use an ESMF.rc file to pass in pre-ESMF_Initialize options to ESMF (see ESMF Docs for allowed flags.
    • NOTE: File must be called ESMF.rc
  • Added ability to run ExtDataDriver.x on a MAPL "tile" grid
  • Add ability to introduce a time-step delay in ExtDataDriver.x to simulate the timestep latency of a real model
  • Added a MAPL_Sleep function, equivalent to some vendor supplied but non-standard sleep function
  • sampling IODA file with trajectory sampler (step-1): make it run
  • Convert ExtData to use ESMF HConfig for YAML parsing rather than YaFYAML
    • Set required ESMF version to 8.5.0
  • Add StationSamplerMod for station sampler
  • Added ReplaceMetadata message and method to replace oserver's metadata
  • Added field utilities to perform basic numeric operations on fields
  • Update arithemetic parser to work with any rank and type of ESMF fields
  • For ExtDataDriver.x only, added logging config to Tests/ExtDataDriverMod.F90 to enable Logger there
  • Added new fill option and run mode for ExtDataDriver.x

Changed

  • Updates to GFE library dependency
    • Require gFTL v1.10.0
    • Require gFTL-shared v1.6.1
    • Require fArgParse v1.5.0
    • Require pFlogger v1.9.5
    • Removed yaFyaml as dependency
  • Updated programs using FLAP for command line parsing to use fArgParse instead
  • Updated components.yaml to use Baselibs 7.14.0
    • ESMA_env v4.9.1 → v4.19.0
      • Baselibs 7.14.0
        • esmf v8.5.0
        • GFE v1.11.0
        • curl 8.2.1
        • HDF5 1.10.10
        • netCDF-C 4.9.2
        • netCDF-Fortran 4.6.1
        • CDO 2.2.1
        • NCO 5.1.7
      • Move to MPT 2.28 at NAS, and other various changes for TOSS4 at NAS
      • Remove Haswell from build.csh
    • ESMA_cmake v3.28.0 → v3.31.0
      • Clean up for TOSS4 changes at NAS
      • Add QUIET_DEBUG flag
      • Suppress some common warnings with Intel Debug
  • Make the GEOSadas CI build separate as it often fails due to race conditions in GSI
  • Update CI to use BCs v11.1.0 and Baselibs 7.14.0
  • Updates to support building MAPL with spack instead of Baselibs
    • Add FindESMF.cmake file to cmake directory (as it can't easily be found via spack)
    • Move CMAKE_MODULE_PATH append statement up to find FindESMF.cmake before we find_package(ESMF)
    • Default BUILD_WITH_FLAP to OFF as we don't build it in spack
    • Explicitly build GEOSadas in CI with -DBUILD_WITH_FLAP=ON as GEOSadas is still behind in moving to use fArgParse

Fixed

  • Created cubed-sphere grid factory with files split by face
  • Removed unneeded and confusing default in History Grid Comp (see #2081)
  • Fixes in CMake for fArgParse transition

Deprecated

  • Deprecate the use of FLAP for command line parsing in favor of fArgParse. FLAP support will be removed in MAPL 3

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.7...v2.40.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.7

DOI

This is a patch release of MAPL that fixes an issue so the pFIO MultigroupServer does not allow a file written by multiple processes at the same time.

All testing shows it zero diff to MAPL 2.39.6

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fix a bug so that MultigroupServer does not allow a file written by multiple processes at the same time.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.6...v2.39.7

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.6

DOI

This patch release of MAPL 2.39 fixes issues with the tripolar grid and with the time_ave_util.x utility.

All testing shows it zero-diff to MAPL 2.39.5.

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Changed

  • Relaxed restriction in the tripolar grid factory so that grids can be made even when the decomposition deos not evenly divide the grid dimension so that the factory can be used in utilities where the core count makes such a condition impossible to satisfiy

Fixed

  • Fix a bug in time_ave_util.x so that it can work with files with no vertical coordinate

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.5...v2.39.6

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.5

DOI

This is a patch release of MAPL has a fix for HISTORY (see #2058). Namely, a user would specify an alias in HISTORY.rc for a variable with a single bin/ungridded dimension and the alias would be ignored. So before this:

'CA.brEXTTAU'    , 'CA.br'     , 'BREXTTAU'    ,

would lead to output of CA.brEXTTAU001 instead of BREXTTAU or BREXTTAU001.

In MAPL 2.39.5, this will now result in a variable called BREXTTAU without the 001. If a user desires that name, they can update the alias in HISTORY.

Beyond that fix, this is zero-diff to MAPL 2.39.4 (all other HISTORY and the state is the same)

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed logic in generating the names of the split fields. If the alias field in the History.rc has separators (;), each substring is used to name the resulting fields. If there are no separators, this will be the exact name of the first split field

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.4...v2.39.5

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.4

DOI

This patch release of MAPL 2.39 fixes a climatology bug in ExtData2G (see #2192 for more information).

All testing with GEOSgcm shows this to be zero-diff to v2.39.3

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Added bug fix when using climatology option in ExtData2G under certain scenarios

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.3...v2.39.4

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.3

DOI

This patch version of MAPL 2.39 fixes a bug when performing vertical regridding in History when the output grid cannot be decomposed so that every core has a DE.

This is zero-diff to v2.39.2 save for cases that encountered the bug.

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed a bug when performing vertical regridding in History when the output grid cannot be decomposed so that every core has a DE

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.2...v2.39.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 about 3 years ago

MAPL - MAPL 2.39.2

DOI

This patch version of MAPL fixes a bug reported by @AlexanderRichert-NOAA with builds of MAPL that do not build with support for pFlogger. There were unprotected find_package(PFLOGGER REQUIRED) calls that tripped up these styles of builds.

This is zero-diff to v2.39.1

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fix unintentional PFLOGGER requirements in geom and pfio

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.1...v2.39.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.39.1

DOI

This patch release of MAPL 2.39 fixes the handling of ungridded dims for averaged collections. When the grid rank is 2, the code erroneously assigned vertical dimension to the ungridded dims

All testing shows it zero-diff to MAPL 2.39.0 when the bug is not encountered (which is rare)

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed the handling of ungridded dims for averaged collections. When the grid rank is 2, the code erroneously assigned vertical dimension to the ungridded dims

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.39.0...v2.39.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.39.0

DOI

This is a minor release of MAPL with new features and fixes. The new features are:

  • Added minimal support for NetCDF "groups".
  • New feature to allow for single component testing as code is refactored
  • Added module to process datetime strings from NetCDF to ESMF_Time and ESMF_TimeInterval variables and vice versa

Most of these features are for internal development at the moment.

Also some fixes were made:

  • READ_RESTART_BY_FACE has been fixed and now can read restarts from full CS grids as well as restarts that have been separated by face via WRITE_RESTART_BY_FACE. The current implementation requires that both num_readers and num_writers must be multiple of 6.
  • 'config.py' has been fixed. python3 requires // for integer divides.

All testing with GEOSgcm shows this to be zero-diff to MAPL 2.38

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Added minimal support for NetCDF "groups". getvar* can now optionally specify a group_name and the data will be returned from the named group rather than the default group.

  • New feature to allow for single component testing as code is refactored

    • Created Comp_Testing_Driver.F90 in Apps
    • Created subset_fields.py to grab a subset of columns
    • Created shell script to perform subsetting, run the driver, and evaluate differences
    • Instructions for use can be viewed under Apps/Comp_Testing_Info.md

  • Added module to process datetime strings from NetCDF to ESMF_Time and ESMF_TimeInterval variables and vice versa

Fixed

  • READ_RESTART_BY_FACE has been fixed and now can read restarts from full CS grids as well as restarts that have been separated by face via WRITE_RESTART_BY_FACE. The current implementation requires that both num_readers and num_writers must be multiple of 6.
  • 'config.py' has been fixed. python3 requires // for integer divides.

What's Changed

New Contributors

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.38.1...v2.39.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.38.1

This is a patch release of MAPL that introduces a new feature needed by some MAPL users. It adds a new runtime option:

RUN_AT_INTERVAL_START:

to force component alarms ring at start of the interval. The default the current behavior still to ring at the end.

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Added new option "RUN_AT_INTERVAL_START:" so force component alarms ring at start of the interval, default still to ring at the end

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.38.0...v2.38.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.38.0

DOI

This is a minor release of MAPL with many new features and fixes.

The new features are:

  • Printed time to write files to the disk in MultiGroupServer (enabled via logging.yaml using MAPL.pfio)
  • Added merge function to Filemetadata to merge two meta objects
  • Added support for "DEPENDS_ON" and "DEPENDS_ON_CHILDREN" for export_specs. The typical usage on this feature is when the calculation of a variable involves other export variables, either from the same component (DEPENDS_ON specifies the list on such variables), or in the children (in this case the expectation is that all of the children have the SAME export). In both cases MAPL performs automatic allocation of these export variables.
  • Added support for use of pFlogger simTime in logging (only if -DBUILD_WITH_PFLOGGER=ON)
    • Note: Due to bug in pFlogger v1.9.3 and older, you must specify a dateFmt in your logging configuration file in the
      formatter when using simTime (see pFlogger issue #90). This is fixed in pFlogger v1.10.0
  • Add geom subdirectory and contents for MAPL Geom framework

All testing shows it to be zero-diff to MAPL 2.37 in re GEOSgcm.

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • Printed time to write files to the disk in MultiGroupServer
  • Added merge function to Filemetadata to merge two meta objects
  • Added support for "DEPENDS_ON" and "DEPENDS_ON_CHILDREN" for export_specs. The typical usage on this feature is when the calculation of a variable involves other export variables, either from the same component (DEPENDS_ON specifies the list on such variables), or in the children (in this case the expectation is that all of the children have the SAME export). In both cases MAPL performs automatic allocation of these export variables.
  • Added support for use of pFlogger simTime in logging (only if -DBUILD_WITH_PFLOGGER=ON)
    • Note: Due to bug in pFlogger v1.9.3 and older, you must specify a dateFmt in your logging configuration file in the
      formatter when using simTime (see pFlogger issue #90).
      This is fixed in pFlogger v1.10.0
  • Add geom subdirectory and contents for MAPL Geom framework

Changed

  • Add logic to GriddedIO class so that if an uninitialized time object is passed, the resulting file will not depend on time
  • Make sure the pfio files are closed when the time and speed appear in logfile
  • Enable more tests in CircleCI

Fixed

  • Move ioserver_profiler%stop call to the right place
  • Caught an untrapped error condition when writing to NetCDF

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.37.3...v2.38.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.37.3

DOI

This patch release of MAPL 2.7 has fixes for the handling of vector regridding for a subdomain with no-DE. It also fixes a no-DE case related to vertical regridding.

All testing with GEOSgcm shows it to be zero-diff to MAPL 2.37.2.

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Fixed the handling of vector regridding for a subdomain with no-DE.
  • Fixed the no-DE case related to vertical regridding.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.37.2...v2.37.3

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.37.2

DOI

This patch release of MAPL 2.37 has a fix to avoid a hang in MAPL_GetGlobalHorzIJIndex

All testing shows it zero-diff with GEOSgcm

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Pulled call MAPL_GridGetCorners out of the condition to avoid hang in MAPL_GetGlobalHorzIJIndex

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.37.1...v2.37.2

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.37.1

DOI

This release of MAPL has fixes for building with the NAG compiler.

All tests show it is zero-diff for GEOSgcm

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Fixed

  • Various nonstandard uses of Fortran caught by NAG compiler
  • Various workarounds for NAG 7.1.113 where the compiler is wrong.

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.37.0...v2.37.1

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago

MAPL - MAPL 2.37.0

DOI

This release of MAPL has some bug fixes relating to stretched grid use. It also has a new feature in History to allow the accumulation in non-instantaneous collections to be reset independently of the writing frequency if requested.

Testing shows GEOSgcm is zero-diff compared to v2.36.0

The libraries this version of MAPL is currently tested with are below. (No change since last release of MAPL)

  • Baselibs 7.8.1
    • netcdf-c 4.9.0 (Needed for quantize support, but not required for all of MAPL)
    • netcdf-fortran 4.6.0 (Needed for quantize support, but not required for all of MAPL)
    • ESMF 8.4.1 (ESMF 8.4.0 required, but 8.4.1 recommended as it has a bug fix)
    • GFE 1.8.0
      • gFTL 1.8.1
      • gFTL-shared 1.5.0
      • pFUnit 4.6.1 (optional)
      • fArgParse 1.4.1 (if -DBUILD_WITH_FARGPARSE=YES, default=YES)
      • pFlogger 1.9.1 (if -DBUILD_WITH_PFLOGGER=YES, default=YES)
      • yaFyaml 1.0.4 (if -DUSE_EXTDATA2G=YES, default=YES)
      • FLAP geos/v1.10.0 (if -DBUILD_WITH_FLAP=YES, default=YES)

Also, if you build with -DUSE_F2PY=ON, you will need:

  • ESMA_cmake v3.28.0

We recommend most external users set -DUSE_F2PY=OFF

From CHANGELOG.md

Added

  • New feature in History to allow the accumulation in non-instantaneous collections to be reset independently of the writing frequency if requested.
  • new macro _RETURN_IF(cond) to provide a succinct early return in procedures with return codes.

Fixed

  • Fixed bug in CubedSphereGridFactory when constructing a grid from a file
  • Cleaned up cubed-sphere grid factory and NCIO to produce files with consistent capitalization and types for the stretching factor

What's Changed

Full Changelog: https://github.com/GEOS-ESM/MAPL/compare/v2.36.0...v2.37.0

Climate Change - Earth and Climate Modeling - Fortran
Published by mathomp4 over 3 years ago