Recan: Python tool for analysis of recombination events in viral genomes
Recan: Python tool for analysis of recombination events in viral genomes - Published in JOSS (2020)
https://github.com/babinyurii/recan
Keywords
alignment bioinformatics distance-plots dna-recombination genetic-distances python recombination-events virology
Last synced: 2 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
genetic distance plotting for recombination events analysis
- Host: GitHub
- URL: https://github.com/babinyurii/recan
- Owner: babinyurii
- License: mit
- Created: 2018-05-30T12:53:01.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2024-11-21T12:16:15.000Z (about 1 year ago)
- Last Synced: 2025-10-18T21:47:37.488Z (2 months ago)
- Topics: alignment, bioinformatics, distance-plots, dna-recombination, genetic-distances, python, recombination-events, virology
- Language: Python
- Homepage:
- Size: 9.78 MB
- Stars: 10
- Watchers: 0
- Forks: 7
- Open Issues: 0
- Releases: 0
-
Metadata Files:
- Readme: README.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
Owner metadata
- Name: Yuriy Babin
- Login: babinyurii
- Email:
- Kind: user
- Description:
- Website:
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/28758465?u=6fa2df9e3b50c78739edd228cbb90ec9a6359749&v=4
- Repositories: 4
- Last ynced at: 2023-03-02T13:30:46.846Z
- Profile URL: https://github.com/babinyurii
GitHub Events
Total
- Push event: 2
Last Year
- Push event: 2
Committers metadata
Last synced: 2 months ago
Total Commits: 285
Total Committers: 3
Avg Commits per committer: 95.0
Development Distribution Score (DDS): 0.077
Commits in past year: 2
Committers in past year: 1
Avg Commits per committer in past year: 2.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Yuriy Babin | b****i@g****m | 263 |
| Бабин Юрий Юрьевич | b****n@p****t | 21 |
| Étienne Mollier | e****r@d****g | 1 |
Committer domains:
- debian.org: 1
- pcr.int: 1
Issue and Pull Request metadata
Last synced: 4 months ago
Total issues: 15
Total pull requests: 5
Average time to close issues: 7 months
Average time to close pull requests: 6 months
Total issue authors: 7
Total pull request authors: 3
Average comments per issue: 2.0
Average comments per pull request: 0.2
Merged pull request: 4
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- betteridiot (9)
- sikuan (1)
- oktaykaplan (1)
- JmaJeremy (1)
- Zjianglin (1)
- ghost (1)
- antoine4ucsd (1)
Top Pull Request Authors
- babinyurii (3)
- emollier (1)
- will-rowe (1)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 36 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 5
- Total maintainers: 1
pypi.org: recan
recan: recombination analysis tool
- Homepage: https://github.com/babinyurii/recan
- Documentation: https://recan.readthedocs.io/
- Licenses: MIT
- Latest release: 0.1.5 (published over 3 years ago)
- Last Synced: 2025-10-26T01:33:22.916Z (2 months ago)
- Versions: 5
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 36 Last month
-
Rankings:
- Dependent packages count: 10.032%
- Forks count: 14.194%
- Stargazers count: 18.456%
- Dependent repos count: 21.662%
- Average: 21.695%
- Downloads: 44.132%
- Maintainers (1)
Dependencies
- biopython *
- matplotlib *
- pandas *
- plotly *
Score: 7.038783541388542