Data

Tools

Indexes

Applications

Experiments

Open Sustainable Technology

PlatiPy: Processing Library and Analysis Toolkit for Medical Imaging in Python

PlatiPy: Processing Library and Analysis Toolkit for Medical Imaging in Python - Published in JOSS (2023)
https://github.com/pyplati/platipy

Keywords

image-analysis medical-imaging python registration segmentation visualization

Keywords from Contributors

archiving measur transforms optimize animals generic conversion compose projection observation

Last synced: 2 months ago
JSON representation

Acceptance Criteria

Repository metadata

Processing Library and Analysis Toolkit for Medical Imaging in Python

Owner metadata

GitHub Events

Total
Last Year

Committers metadata

Last synced: 2 months ago

Total Commits: 744
Total Committers: 12
Avg Commits per committer: 62.0
Development Distribution Score (DDS): 0.402

Commits in past year: 4
Committers in past year: 3
Avg Commits per committer in past year: 1.333
Development Distribution Score (DDS) in past year: 0.5

Name Email Commits
Phillip Chlap p****p@u****u 445
rnfinnegan r****n@g****m 240
dependabot[bot] 4****] 41
Simon Biggs s****s@r****i 8
Phillip Chlap p****p@s****u 3
S. Gay s****7@g****m 1
Justin Kirby 2****u 1
Jing Zhang j****r@g****m 1
Gabriele g****b@g****m 1
David Barbee b****d@g****m 1
Daniel Al Mouiee d****e@g****m 1
Phillip Chlap p****p@r****m 1

Committer domains:

Issue and Pull Request metadata

Last synced: 4 months ago

Total issues: 48
Total pull requests: 72
Average time to close issues: about 1 year
Average time to close pull requests: 25 days
Total issue authors: 31
Total pull request authors: 9
Average comments per issue: 2.13
Average comments per pull request: 0.17
Merged pull request: 60
Bot issues: 0
Bot pull requests: 38

Past year issues: 10
Past year pull requests: 14
Past year average time to close issues: 5 days
Past year average time to close pull requests: 2 days
Past year issue authors: 9
Past year pull request authors: 4
Past year average comments per issue: 1.2
Past year average comments per pull request: 0.21
Past year merged pull request: 9
Past year bot issues: 0
Past year bot pull requests: 7

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/pyplati/platipy

Top Issue Authors

  • pchlap (5)
  • dalmouiee (5)
  • rnfinnegan (5)
  • MarkGardnerUSyd (3)
  • Ken32g (2)
  • CrytoGen (2)
  • denbonte (2)
  • jaketakes (1)
  • 1413194910 (1)
  • bwheelz36 (1)
  • YYAN97 (1)
  • brendan-whelan-seetreat (1)
  • dlbarbee (1)
  • MLK97 (1)
  • VincentBourbon (1)

Top Pull Request Authors

  • dependabot[bot] (61)
  • pchlap (30)
  • rnfinnegan (3)
  • kirbyju (2)
  • dlbarbee (2)
  • dalmouiee (2)
  • jizhang02 (2)
  • tomaroberts (2)
  • StellarStorm (1)

Top Issue Labels

Top Pull Request Labels

  • dependencies (61)
  • python (7)

Package metadata

pypi.org: platipy

Processing Library and Analysis Toolkit for Medical Imaging in Python

  • Homepage:
  • Documentation: https://platipy.readthedocs.io/
  • Licenses: Apache 2.0 License
  • Latest release: 0.7.2 (published over 1 year ago)
  • Last Synced: 2025-10-26T00:47:44.111Z (2 months ago)
  • Versions: 20
  • Dependent Packages: 3
  • Dependent Repositories: 9
  • Downloads: 2,730 Last month
  • Docker Downloads: 674
  • Rankings:
    • Docker downloads count: 2.013%
    • Dependent packages count: 2.367%
    • Average: 4.267%
    • Dependent repos count: 4.853%
    • Downloads: 7.837%
  • Maintainers (1)

Dependencies

services/nnunet/requirements-nnunet.txt pypi
  • torch *
  • torchaudio *
  • torchvision *
services/radiomics/requirements-radiomics.txt pypi
  • pyradiomics ==3.0.1
.github/workflows/build_docs.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • peaceiris/actions-gh-pages v3 composite
.github/workflows/package.yml actions
  • actions/checkout v2 composite
  • docker/build-push-action v2 composite
  • docker/login-action v1 composite
  • docker/setup-buildx-action v1 composite
  • docker/setup-qemu-action v1 composite
.github/workflows/pull_request.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
.github/workflows/release.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v2 composite
  • peaceiris/actions-gh-pages v3 composite
  • peter-evans/repository-dispatch v1 composite
Dockerfile docker
  • ubuntu 20.04 build
docker-compose.yml docker
  • platipy/platipy dev
  • redis latest
services/bronchus/Dockerfile docker
  • platipy/platipy service build
services/cardiac/Dockerfile docker
  • platipy/platipy service build
services/dirqa/Dockerfile docker
  • platipy/platipy service build
services/jupyter/Dockerfile docker
  • platipy/platipy latest build
services/jupyter/docker-compose.yml docker
  • platipy/platipy jupyter
services/mridixon/Dockerfile docker
  • platipy/platipy service build
services/nnunet/Dockerfile docker
  • platipy/platipy service build
services/pinnacle/Dockerfile docker
  • platipy/platipy service build
services/radiomics/Dockerfile docker
  • platipy/platipy service build
services/sample/Dockerfile docker
  • platipy/platipy service build
poetry.lock pypi
  • 202 dependencies
pyproject.toml pypi
  • Flask ^2.1.0
  • Flask-RESTful >=0.3.8
  • Flask-SQLAlchemy ^2.4.4
  • Jinja2 ^3.1
  • SimpleITK ^2.0.2
  • celery ^5.2.3
  • click ^8.0.3
  • gunicorn ^20.0.4
  • matplotlib ^3.2.2
  • nnunet ^1.7.0
  • pandas ^1.3.0
  • psutil ^5.8.0
  • pydicom ^2.1.2
  • pymedphys >=0.38.0
  • pynetdicom ^2.0.2
  • python ^3.8.0
  • redis ^3.5.3
  • requests ^2.25.1
  • rt-utils ^1.1.4
  • scikit-image >=0.18.1
  • vtk ^9.1.0
services/totalsegmentator/Dockerfile docker
  • nvidia/cuda 12.2.0-runtime-ubuntu22.04 build
services/dirqa/requirements-dirqa.txt pypi
services/totalsegmentator/requirements-totalseg.txt pypi
  • TotalSegmentator *
  • torch *
  • torchaudio *
  • torchvision *

Score: 15.739711325880293