anndata: Access and store annotated data matrices
anndata: Access and store annotated data matrices - Published in JOSS (2024)
https://github.com/scverse/anndata
Keywords
anndata bioinformatics data-science machine-learning scanpy scverse transcriptomics
Keywords from Contributors
visualize-data scrna-seq dataviz single-cell-rna-seq single-cell package-management conda genomics parallel single-cell-genomics
Last synced: 2 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Annotated data.
- Host: GitHub
- URL: https://github.com/scverse/anndata
- Owner: scverse
- License: bsd-3-clause
- Created: 2017-08-11T14:10:06.000Z (over 8 years ago)
- Default Branch: main
- Last Pushed: 2025-10-23T17:54:15.000Z (3 months ago)
- Last Synced: 2025-10-23T18:07:43.403Z (3 months ago)
- Topics: anndata, bioinformatics, data-science, machine-learning, scanpy, scverse, transcriptomics
- Language: Python
- Homepage: http://anndata.readthedocs.io
- Size: 6.07 MB
- Stars: 667
- Watchers: 13
- Forks: 175
- Open Issues: 272
- Releases: 0
-
Metadata Files:
- Readme: README.md
- Contributing: docs/contributing.md
- License: LICENSE
Committers metadata
Last synced: 2 months ago
Total Commits: 1,543
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Commits in past year: 195
Committers in past year: 14
Avg Commits per committer in past year: 13.929
Development Distribution Score (DDS) in past year: 0.549
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Past year average time to close pull requests: 3 days
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Past year pull request authors: 18
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Past year average comments per pull request: 1.26
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Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 962,749 last-month
- Total docker downloads: 36,483
- Total dependent packages: 389
- Total dependent repositories: 467
- Total versions: 100
- Total maintainers: 2
pypi.org: anndata
Annotated data.
- Homepage:
- Documentation: https://anndata.readthedocs.io/
- Licenses: bsd-3-clause
- Latest release: 0.12.2 (published 5 months ago)
- Last Synced: 2025-08-11T07:31:19.758Z (5 months ago)
- Versions: 100
- Dependent Packages: 389
- Dependent Repositories: 467
- Downloads: 962,749 Last month
- Docker Downloads: 36,483
-
Rankings:
- Dependent packages count: 0.085%
- Dependent repos count: 0.667%
- Downloads: 0.949%
- Docker downloads count: 1.353%
- Average: 1.685%
- Stargazers count: 2.937%
- Forks count: 4.116%
- Maintainers (2)
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Score: 24.685849713117385