Ichthtyop

A free Java tool designed to study the effects of physical and biological factors on ichthyoplankton dynamics.
https://github.com/ichthyop/ichthyop

Category: Biosphere
Sub Category: Marine Life and Fishery

Last synced: about 12 hours ago
JSON representation

Repository metadata

A Lagrangian tool for simulating ichthyoplankton dynamics

• Host: GitHub
• URL: https://github.com/ichthyop/ichthyop
• Owner: ichthyop
• License: gpl-3.0
• Created: 2020-08-11T07:54:40.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2026-02-04T09:38:17.000Z (4 days ago)
• Last Synced: 2026-02-04T22:33:30.713Z (4 days ago)
• Language: Java
• Homepage: http://www.ichthyop.org/
• Size: 109 MB
• Stars: 12
• Watchers: 1
• Forks: 9
• Open Issues: 44
• Releases: 26
• Metadata Files:
  • Readme: README.md
  • License: LICENSE
  • Citation: CITATION.cff
  • Authors: AUTHORS.md
  • Codemeta: codemeta.json
  • Zenodo: .zenodo.json

README.md

Citation (CITATION.cff)

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
version: 3.4.1
date-released: '2023-02-28'
title: >-
  Ichthyop: A Lagrangian tool for modelling ichthyoplankton
  dynamics
message: 'If you use this software, please cite it as below.'
type: software
authors:
  - family-names: Barrier
    given-names: Nicolas
    orcid: 'https://orcid.org/0000-0002-1693-4719'
    affiliation: >-
      MARBEC, University Montpellier, IRD, CNRS, Ifremer,
      INRAE, Sète, France
    email: nicolas.barrier@ird.fr
  - family-names: Verley
    given-names: Philippe
    orcid: 'https://orcid.org/0000-0002-5686-2764'
    affiliation: >-
      AMAP, Univ. Montpellier, CIRAD, CNRS, INRAE, IRD,
      Montpellier, France
    email: philippe.verley@ird.fr
  - family-names: Lett
    given-names: Christophe
    orcid: 'https://orcid.org/0000-0001-5809-2452'
    affiliation: >-
      MARBEC, University Montpellier, IRD, CNRS, Ifremer,
      INRAE, Sète, France
    email: christophe.lett@ird.fr
  - given-names: Christian
    family-names: Mullon
    orcid: 'https://orcid.org/0000-0003-3990-9118'
    affiliation: >-
      MARBEC, University Montpellier, IRD, CNRS, Ifremer,
      INRAE, Sète, France
    email: christian.mullon@ird.fr
identifiers:
  - type: doi
    value: 10.5281/zenodo.4243813
    description: Ichthyop DOI
  - type: url
    value: 'https://doi.org/10.1016/j.envsoft.2008.02.005'
    description: Reference paper
repository-code: 'https://github.com/ichthyop/ichthyop'
url: 'https://ichthyop.org'
abstract: >-
  Ichthyop is a free Java tool designed to study the effects
  of physical and biological factors on ichthyoplankton
  dynamics. It incorporates the most important processes
  involved in fish early life: spawning, movement, growth,
  mortality and recruitment. The tool uses as input time
  series of velocity, temperature and salinity fields
  archived from ROMS, MARS, NEMO or SYMPHONIE oceanic models
  (either files or OpenDAP).
keywords:
  - ichthyop
  - biophysical model
  - lagrangian model
  - individual-based model
  - particle tracking
  - fish early life
  - fish eggs and larvae
  - transport
  - diffusion
  - orientation
  - nycthemeral migration
license: GPL-3.0

---

Owner metadata

• Name: Ichthyop
• Login: ichthyop
• Email:
• Kind: organization
• Description: A Lagrangian tool for simulating ichthyoplankton dynamics
• Website: http://www.ichthyop.org/
• Location:
• Twitter:
• Company:
• Icon url: https://avatars.githubusercontent.com/u/69504072?v=4
• Repositories: 4
• Last ynced at: 2023-04-28T12:23:30.581Z
• Profile URL: https://github.com/ichthyop

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GitHub Events

Total

• Release event: 6
• Delete event: 4
• Pull request event: 2
• Issues event: 21
• Watch event: 7
• Issue comment event: 40
• Push event: 131
• Create event: 18

Last Year

• Release event: 6
• Delete event: 4
• Pull request event: 2
• Issues event: 15
• Watch event: 2
• Issue comment event: 19
• Push event: 116
• Create event: 16

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Committers metadata

Last synced: 4 days ago

Name	Email	Commits
barriern	n****r@i****r	649
pv1f08a	p****y@i****r	644
ga1fb82	g****2@e****m	26
mt1fd2b	m****b@e****m	12
cl1ed68	c****t@i****r	4
ga07972	g****2@e****m	4
mj1f94e	m****e@e****m	3
fl0186b	f****b@e****m	1

Committer domains:

• ird.fr: 3

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Issue and Pull Request metadata

Last synced: 4 days ago

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/ichthyop/ichthyop

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Dependencies

Score: 6.104793232414986