BiRD - v0.0.53

What's Changed

• added airlift tutorial case by @mjrahimi in https://github.com/NatLabRockies/BioReactorDesign/pull/89
• kLa calculation with uncertainty by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/90
• Update post process doc by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/91
• Tutorial for bubble column reactor by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/97
• Describe turbulence model in the tutorials by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/101
• Fix loop reactor mixing tut by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/99
• Fixing ci test by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/105
• Simulated Annealing wrapper with surrogate model selection and hyperparameter tuning by @jainprana in https://github.com/NatLabRockies/BioReactorDesign/pull/107
• Segregate figure saving for optimization by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/109
• Fix and handle tabs in yaml files by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/110
• update the ci to test python 3.13 by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/111
• IO of open foam files in python by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/112
• Centralize postprocess by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/113
• Add flat panel reactor tutorial and add it to the ci by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/114
• Document the python reading of open foam files by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/115
• Generate multiple loop reactor designs by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/104
• Use logger instead of print by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/118
• Make sure that presteps.sh and run.sh fail quickly if any command fails by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/117
• Format sim folder name by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/120
• Python interface tutorial + reorganize docs by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/121
• Clean up parsing and exiting by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/123
• Automatic species thermo write up by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/124
• Add logs to describe how mesh size is obtained by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/125
• Addcov by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/127
• Mean statistics calculation with uncertainty by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/126
• Safet0 by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/128
• Generate files in temporary directories for unit tests by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/129
• Add api doc to RTD by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/130
• better control automatic gen of docs by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/131
• explicit path codecov by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/132
• Flex mesh by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/134
• post quantity fix by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/133
• Improved Superficial velocity calculation with paraview by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/135
• Kla spargerdesign by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/136
• Fix kla calc by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/137
• Robustify post process by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/138
• Fix compute fitted kla by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/139
• Fall cleanup by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/140
• Add a field derived from primary ones in the conditioning by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/142
• Putida global vars fix by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/144
• Switch NREL to NLR by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/145
• Update domain name to NatLabRockies by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/146
• Move to pyproject by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/147
• fix coverage calculation by @malihass in https://github.com/NatLabRockies/BioReactorDesign/pull/148

New Contributors

• @mjrahimi made their first contribution in https://github.com/NatLabRockies/BioReactorDesign/pull/89
• @jainprana made their first contribution in https://github.com/NatLabRockies/BioReactorDesign/pull/107

Full Changelog: https://github.com/NatLabRockies/BioReactorDesign/compare/v0.0.16...v0.0.53

Renewable Energy - Bioenergy - Liquid
Published by malihass 4 months ago

BiRD - v0.0.16

What's Changed

• Minor cleanup by @malihass in https://github.com/NREL/BioReactorDesign/pull/72
• Update the documentation with the new solver and tutorials by @malihass in https://github.com/NREL/BioReactorDesign/pull/73
• Add QuickStart doc by @malihass in https://github.com/NREL/BioReactorDesign/pull/74
• Add sphinx documentation instead of readmes by @malihass in https://github.com/NREL/BioReactorDesign/pull/75
• Upgrade cal tut by @malihass in https://github.com/NREL/BioReactorDesign/pull/77
• Test the pypi package by @malihass in https://github.com/NREL/BioReactorDesign/pull/79
• Typos doc by @malihass in https://github.com/NREL/BioReactorDesign/pull/78
• Fix GitHub page deployment by @malihass in https://github.com/NREL/BioReactorDesign/pull/80
• Calibration tutorial by @malihass in https://github.com/NREL/BioReactorDesign/pull/76
• Add BSD calibration tutorial and result to docs by @malihass in https://github.com/NREL/BioReactorDesign/pull/84
• Fix images titles and arrangements in docs by @malihass in https://github.com/NREL/BioReactorDesign/pull/85
• Add label to calibration images for normal-beta tutorial and rename calibration doc page by @malihass in https://github.com/NREL/BioReactorDesign/pull/86
• Readable and labelled figures for the doc+ inverse model case upload by @malihass in https://github.com/NREL/BioReactorDesign/pull/87
• Fix doc compilation error by @malihass in https://github.com/NREL/BioReactorDesign/pull/88

Full Changelog: https://github.com/NREL/BioReactorDesign/compare/v0.0.15...v0.0.16

Renewable Energy - Bioenergy - Liquid
Published by malihass over 1 year ago

BiRD - v0.0.15

What's Changed

• add projectedBased column by @malihass in https://github.com/NREL/BioReactorDesign/pull/2
• Optim setup by @malihass in https://github.com/NREL/BioReactorDesign/pull/3
• Conditional mean plot by @malihass in https://github.com/NREL/BioReactorDesign/pull/4
• prepare sparger optim by @malihass in https://github.com/NREL/BioReactorDesign/pull/5
• Multi solve by @malihass in https://github.com/NREL/BioReactorDesign/pull/6
• Post by @malihass in https://github.com/NREL/BioReactorDesign/pull/16
• add ofsolvers by @malihass in https://github.com/NREL/BioReactorDesign/pull/17
• Python version by @malihass in https://github.com/NREL/BioReactorDesign/pull/19
• Rename to bird by @malihass in https://github.com/NREL/BioReactorDesign/pull/20
• Spelling checks by @malihass in https://github.com/NREL/BioReactorDesign/pull/21
• Reorganize the repo by @malihass in https://github.com/NREL/BioReactorDesign/pull/22
• Add documentation for inverse modeling by @malihass in https://github.com/NREL/BioReactorDesign/pull/23
• add pypi description by @malihass in https://github.com/NREL/BioReactorDesign/pull/24
• fix image links by @malihass in https://github.com/NREL/BioReactorDesign/pull/25
• block rectangular building block by @malihass in https://github.com/NREL/BioReactorDesign/pull/26
• Surf patch bc by @malihass in https://github.com/NREL/BioReactorDesign/pull/27
• Case fix + prep roc test by @malihass in https://github.com/NREL/BioReactorDesign/pull/30
• Morecases by @malihass in https://github.com/NREL/BioReactorDesign/pull/31
• Morecases by @malihass in https://github.com/NREL/BioReactorDesign/pull/33
• revert numpy-stl to fix action by @malihass in https://github.com/NREL/BioReactorDesign/pull/34
• Dynmix by @malihass in https://github.com/NREL/BioReactorDesign/pull/37
• Various fixes by @malihass in https://github.com/NREL/BioReactorDesign/pull/38
• Fix fvModel template by @malihass in https://github.com/NREL/BioReactorDesign/pull/39
• sign in mixers by @malihass in https://github.com/NREL/BioReactorDesign/pull/40
• Change smear distance based on the number of mesh points by @malihass in https://github.com/NREL/BioReactorDesign/pull/44
• Cubicmix by @malihass in https://github.com/NREL/BioReactorDesign/pull/43
• Headbranch by @malihass in https://github.com/NREL/BioReactorDesign/pull/45
• Reacting loop by @malihass in https://github.com/NREL/BioReactorDesign/pull/48
• pypi release with loop reactor mesh fix by @malihass in https://github.com/NREL/BioReactorDesign/pull/49
• Update reference title by @malihass in https://github.com/NREL/BioReactorDesign/pull/50
• add post path instead of hard coding by @malihass in https://github.com/NREL/BioReactorDesign/pull/51
• Genetic algo sim creation tools by @malihass in https://github.com/NREL/BioReactorDesign/pull/52
• Optim setup by @malihass in https://github.com/NREL/BioReactorDesign/pull/53
• add spatial scaleup script by @malihass in https://github.com/NREL/BioReactorDesign/pull/55
• Calibration tutorial by @malihass in https://github.com/NREL/BioReactorDesign/pull/56
• Calibration of likelihood uncertainty by @malihass in https://github.com/NREL/BioReactorDesign/pull/60
• Fmuni by @fmuni in https://github.com/NREL/BioReactorDesign/pull/64
• Fixed bug in disengagement and removed unused tutorials by @fmuni in https://github.com/NREL/BioReactorDesign/pull/68
• Support python 3.9 + tutorial and experimental tested in CI by @malihass in https://github.com/NREL/BioReactorDesign/pull/66

New Contributors

• @fmuni made their first contribution in https://github.com/NREL/BioReactorDesign/pull/64

Full Changelog: https://github.com/NREL/BioReactorDesign/commits/v0.0.15

Renewable Energy - Bioenergy - Liquid
Published by malihass over 1 year ago