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ecodata

A data package for reporting on Northeast Continental Shelf ecosystem status and trends.
https://github.com/NOAA-EDAB/ecodata

Category: Biosphere
Sub Category: Marine Life and Fishery

Keywords

data-package soe

Keywords from Contributors

report presentation mafmc technical-documentation nefmc code-base hydra multispecies support-package template-engine

Last synced: 28 minutes ago
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Repository metadata

A data package for reporting on Northeast Continental Shelf ecosystem status and trends.

README.Rmd

          ---
output: github_document
editor_options: 
  chunk_output_type: console
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```
# ecodata  


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## Overview

`ecodata` is an R data package developed by the Ecosystems Dynamics and Assessment Branch of the Northeast Fisheries Science Center
for use in State of the Ecosystem (SOE) reporting. SOE reports are high-level overviews of ecosystem indicator status and trends occurring
on the Northeast Continental Shelf. Unless otherwise stated, data are representative of specific Ecological Production Units (EPUs), referring to 
the Mid-Atlantic Bight (MAB), Georges Bank (GB), Gulf of Maine (GOM), and Scotian Shelf (SS). SOE reports are developed for US Fishery
Management Councils (FMCs), and therefore indicator data for Scotian Shelf are included when available, but this is not always the case. 

### Please consult the [technical documentation](https://noaa-edab.github.io/tech-doc/) of SOE indicators before using data sets.

## State of the Ecosystem cycle

The main branch of this repository contains the data used in the most recently published [State of the Ecosystem](https://www.fisheries.noaa.gov/new-england-mid-atlantic/ecosystems/state-ecosystem-reports-northeast-us-shelf) reports (Mid Atlantic and New England reports). Data for use in the following years report can be found on the `dev` branch of the repository. Once the reports are written and the cycle ends this data will be pulled into the main branch and [released](https://github.com/NOAA-EDAB/ecodata/releases)

## Installation

For the last released complete data set

```{r, eval = F}
remotes::install_github("noaa-edab/ecodata",build_vignettes=TRUE)
```

For data used in the current developing cycle

```{r, eval = F}
remotes::install_github("noaa-edab/ecodata@dev",build_vignettes=TRUE)
```


## Loading data sets

1.  All derived data sets are available once the package has been loaded into the environment. View available data sets using the syntax `ecodata::...`

### Legal disclaimer *This repository is a scientific product and is not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. All NOAA GitHub project code is provided on an ‘as is’ basis and the user assumes responsibility for its use. Any claims against the Department of Commerce or Department of Commerce bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation or favoring by the Department of Commerce. The Department of Commerce seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by DOC or the United States Government.*

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Last synced: 6 days ago

Total Commits: 1,620
Total Committers: 12
Avg Commits per committer: 135.0
Development Distribution Score (DDS): 0.594

Commits in past year: 305
Committers in past year: 4
Avg Commits per committer in past year: 76.25
Development Distribution Score (DDS) in past year: 0.393

Name Email Commits
kimberly-bastille k****e@g****m 657
Brandon Beltz - NOAA Affiliate 1****1 320
andybeet 2****t 257
seanhardison1 s****n@g****m 216
Sarah Gaichas s****s@n****v 131
Joseph Caracappa (NOAA) 5****1 23
Ben Best b****n@e****m 5
Kimberly Bastille k****m@K****l 3
Abby Tyrell 7****3 2
Sean Lucey S****y@N****v 2
Scott Large s****e 2
Andrew Beet a****t 2

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Issue and Pull Request metadata

Last synced: 1 day ago

Total issues: 132
Total pull requests: 130
Average time to close issues: 7 months
Average time to close pull requests: 25 days
Total issue authors: 14
Total pull request authors: 9
Average comments per issue: 1.96
Average comments per pull request: 1.49
Merged pull request: 120
Bot issues: 0
Bot pull requests: 0

Past year issues: 63
Past year pull requests: 62
Past year average time to close issues: about 1 month
Past year average time to close pull requests: 1 day
Past year issue authors: 7
Past year pull request authors: 4
Past year average comments per issue: 1.33
Past year average comments per pull request: 2.29
Past year merged pull request: 59
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/NOAA-EDAB/ecodata

Top Issue Authors

  • BBeltz1 (50)
  • sgaichas (25)
  • andybeet (16)
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  • khyde (3)
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Top Pull Request Authors

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  • seanhardison1 (2)
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Top Issue Labels

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Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • AICcmodavg * suggests
  • dplyr * suggests
  • ggplot2 * suggests
  • here * suggests
  • knitr * suggests
  • lubridate * suggests
  • mgcv * suggests
  • rmarkdown * suggests
  • stringr * suggests
  • tidyr * suggests
  • tufte * suggests
  • usethis * suggests
  • zoo * suggests

Score: 6.80239476332431