A curated list of open technology projects to sustain a stable climate, energy supply, biodiversity and natural resources.

Recent Releases of rvertnet

rvertnet - rvertnet 0.8.4

  • remove hardcoded figure that caused failed vignette build on 2 CRAN check runners with old pandoc versions

Biosphere - Biodiversity Data Access and Management - R
Published by slager about 1 year ago

rvertnet - rvertnet v0.8.3

MINOR IMPROVEMENTS

  • new maintainer (#71)
  • fix CI
  • refresh test fixtures (#71)
  • remove plyr from examples
  • refresh Darwin core terms and move to data object
  • refresh vignette and its pre-compilation
  • update Makefile
  • update roxygen2 and documentation fixes
  • remove outdated files

BUG FIXES

  • fix class handling in vertmap to allow tibble input
  • allow vignette to build
  • fix ggplot2 deprecation warning (#71)

Biosphere - Biodiversity Data Access and Management - R
Published by slager about 1 year ago

rvertnet - rvertnet v0.8.2

MINOR IMPROVEMENTS

  • vignette fix

Biosphere - Biodiversity Data Access and Management - R
Published by sckott about 1 year ago

rvertnet - rvertnet v0.8.0

NEW FEATURES

  • searchbyterm() and bigsearch() reworked: both functions now have the first parameter as ..., which accepts any valid query parameter. There were so many query parameters for these functions it was a bit overwhelming. See ?searchbyterm docs for details (#66)

MINOR IMPROVEMENTS

  • decode the request URL before printing to the R console so users can more easily see what request they have done (#67)
  • vignette title fix (#68)

BUG FIXES

  • searchbyterm() fix: booleans need to be converted to VertNet's expected 0/1 instead of true/false (#66)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott about 5 years ago

rvertnet - rvertnet v0.7.0

MINOR IMPROVEMENTS

  • add month and day params to searchbyterm (#64)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott about 7 years ago

rvertnet - rvertnet v0.6.2

BUG FIXES

  • A small data source used in one function was on the web, and
    was moved - that data source now within the pkg as quite small, and
    now pkg won't break when the file is moved again (#61) (#62)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 7 years ago

rvertnet - rvertnet v0.6.0

Added Code of Conduct.

NEW FEATURES

  • Now using crul package for HTTP requests instead of httr (#57)
  • Note that verbose parameter has been replaced with messages throughout
    the package.
  • Now with function for search for trait data: traitsearch() (#55)

DEFUNCT AND DEPRECATED

  • All dump functions are now defunct. Those functions tried to help users
    work with bulk Vertnet data - the setup has gotten too complex (#56)

MINOR IMPROVEMENTS

  • Improvements to documentation for traitsearch() function on what
    fields have given data (#58) thanks @gaurav
  • vertsearch() and searchbyterm() gain new parameter only_dwc, which
    allows to optionally only return Darwin Core fields

BUG FIXES

  • Small fix to vertsummary() (59)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 7 years ago

rvertnet - rvertnet v0.5.0

NEW FEATURES

  • searchbyterm() gains new parameter query to allow full text search,
    much like vertsearch(), but with the ability to also use all the parameters
    available in searchbyterm() (#53)

MINOR IMPROVEMENTS

  • Use dplyr::bind_rows instead of the deprecated dplyr::rbind_all (#51)
  • remove personal email address from tests (#52)
  • Namespace base R pkg fxn calls (methods/stats/utils), and removed
    some package dependencies that we didn't really need (plyr) (#54)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 8 years ago

rvertnet - rvertnet v0.4.4

MINOR IMPROVEMENTS

  • Updated docs to better indicate how to use the cursor feature (#49)
  • Now using explicit encoding specification when using httr::content() (#47)

BUG FIXES

  • Fixed externalptr error in the internal vert_GET() function (#48)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott about 9 years ago

rvertnet - v0.4.1

BUG FIXES

  • Fixed a bug in bigsearch() in which we had forgotten to do
    internal conversion of logical input to 0/1 needed by the web
    API (#46)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 9 years ago

rvertnet - rvertnet v0.4.0

NEW FEATURES

  • New set of functions to make working with VertNet data dumps
    easier. dump_links() gives you links to various data dump
    resources; dump_init() initialized a SQLite database connection;
    dump_tbl() creates a dplyr::tbl object, which can then be used
    in a dplyr query. This setup requires that the user manually
    download data dumps uncompress, and load into SQLite. We hope to
    make this process easier in the future. (#36)

MINOR IMPROVEMENTS

  • Fixes to vertmap() for new ggplot2 version (#43)
  • Added note to docs for bigsearch() for how to read in data
    after obtaining the data (#44)

BUG FIXES

  • Fix to the searchbyterm() function. When the parameter stateprovince
    was used, lead to error, as that param requires different handling than
    other params. (#45)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 9 years ago

rvertnet - rvertnet v0.3.4

NEW FEATURES

  • New function vert_id() to get occurrence records by occurenceid,
    that is, single occurrence ids. (#40)

MINOR IMPROVEMENTS

  • Explicitly import non-base R functions (#39)

BUG FIXES

  • Lowercase occurenceID to occurrenceid to simplify life (#41)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 9 years ago

rvertnet - rvertnet 0.3.0

NEW FEATURES

  • searchbyterm() and bigsearch() have some parameters that accept multiple values.
    Fixed to allow this (#37)
  • Internals of searchbyterm(), spatialsearch(), and vertsearch() reworked to
    use cursor so we internally do paging for you for bigger result sets. (#25)

MINOR IMPROVEMENTS

  • Replaced data.table import with dplyr
  • Using skip_on_cran() (#38)
  • Minor vignette updates (#35)
  • Metadata now returned in data requests (#33)

Biosphere - Biodiversity Data Access and Management - R
Published by sckott almost 10 years ago

rvertnet - v0.2.2

Package completely reworked for the new VertNet API.

NEW FEATURES

  • The functions vertavailablemaps(), vertlocations(),
    vertoccurrence(), vertoccurrencecount(), vertproviders(),
    verttaxa() are now defunct. You can call these functions, but
    they print an error message, saying they are defunct.
  • Gained new functions bigsearch(), searchbyterm(),
    spatialsearch(), and vertsummary().
  • Gained new author: Chris Ray

MINOR IMPROVEMENTS

  • RJSONIO replaced with jsonlite
  • Changed from CC0 to MIT license

Biosphere - Biodiversity Data Access and Management - R
Published by sckott over 10 years ago