https://github.com/ncbo/bioportal_web_ui

A Rails application for biological ontologies
https://github.com/ncbo/bioportal_web_ui

Keywords

annotation bioinformatics bioportal metadata obo ontology-repository open-science open-source owl rdf ruby-on-rails semantic-web

Keywords from Contributors

ontology knowledge-graph transforms measur archiving compose animals optimize generic conversion

Last synced: 11 months ago
JSON representation

Acceptance Criteria

Revelant topics? true
External users? true
Open source license? true
Active? true
Fork? true

Repository metadata

A Rails application for biological ontologies

Host: GitHub
URL: https://github.com/ncbo/bioportal_web_ui
Owner: ncbo
License: other
Fork: true (ontoportal/ontoportal_web_ui)
Created: 2012-07-27T00:22:19.000Z (almost 13 years ago)
Default Branch: master
Last Pushed: 2024-04-25T19:44:31.000Z (about 1 year ago)
Last Synced: 2024-04-26T00:49:44.386Z (about 1 year ago)
Topics: annotation, bioinformatics, bioportal, metadata, obo, ontology-repository, open-science, open-source, owl, rdf, ruby-on-rails, semantic-web
Language: Ruby
Homepage: http://bioportal.bioontology.org/
Size: 36.6 MB
Stars: 20
Watchers: 15
Forks: 2
Open Issues: 101
Releases: 0
Metadata Files:
- Readme: README
- License: license.txt

Owner metadata

Name: National Center for Biomedical Ontology
Login: ncbo
Email: [email protected]
Kind: organization
Description:
Website: http://www.bioontology.org
Location: Stanford, CA
Twitter:
Company:
Icon url: https://avatars.githubusercontent.com/u/317926?v=4
Repositories: 48
Last ynced at: 2024-03-26T03:48:01.806Z
Profile URL: https://github.com/ncbo

GitHub Events

Total

Create event: 231
Commit comment event: 9
Release event: 57
Issues event: 353
Watch event: 23
Delete event: 76
Issue comment event: 253
Push event: 929
Pull request review comment event: 17
Pull request review event: 22
Pull request event: 135
Fork event: 16

Last Year

Create event: 38
Delete event: 18
Fork event: 1
Issue comment event: 65
Issues event: 57
Pull request event: 39
Pull request review comment event: 7
Pull request review event: 9
Push event: 69
Release event: 15

Committers metadata

Last synced: about 1 year ago

Total Commits: 4,438
Total Committers: 17
Avg Commits per committer: 261.059
Development Distribution Score (DDS): 0.46

Commits in past year: 162
Committers in past year: 4
Avg Commits per committer in past year: 40.5
Development Distribution Score (DDS) in past year: 0.093

Name	Email	Commits
Paul R Alexander	p**r@s**u	2395
Jennifer Vendetti	v**i@s**u	1086
Darren L. Weber, Ph.D	d**r@s**u	415
mdorf	m**f@s**u	176
Nick Griffith	n**f@s**u	154
Alex Skrenchuk	a**r@s**u	105
Syphax Bouazzouni	g**i@e**z	31
Darren L. Weber, Ph.D	d**r@s**u	30
Marcos Martinez	m**o@g**m	19
Vincent Emonet	v**t@g**m	7
dependabot[bot]	4****]	5
Paul R Alexander	p**l@l**o	4
Darren L. Weber, Ph.D	d**g@g**m	4
maseda	m****a	4
Alex Skrenchuk	a**r@g**m	1
Jérôme Lamarque	j**e@l**r	1
Syphax Bouazzouni	b**i@M**l	1

Committer domains:

Issue and Pull Request metadata

Last synced: over 1 year ago

Total issues: 63
Total pull requests: 47
Average time to close issues: 9 months
Average time to close pull requests: about 2 months
Total issue authors: 5
Total pull request authors: 4
Average comments per issue: 1.89
Average comments per pull request: 0.47
Merged pull request: 32
Bot issues: 0
Bot pull requests: 11

Past year issues: 35
Past year pull requests: 25
Past year average time to close issues: 28 days
Past year average time to close pull requests: 8 days
Past year issue authors: 4
Past year pull request authors: 4
Past year average comments per issue: 1.31
Past year average comments per pull request: 0.28
Past year merged pull request: 22
Past year bot issues: 0
Past year bot pull requests: 3

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/ncbo/bioportal_web_ui

Top Issue Authors

jvendetti (33)
alexskr (24)
syphax-bouazzouni (3)
mdorf (2)
graybeal (1)

Top Pull Request Authors

jvendetti (16)
syphax-bouazzouni (11)
dependabot[bot] (11)
alexskr (9)

Top Issue Labels

bug (14)
enhancement (5)
invalid (2)
KB Aim1 Maintenance (2)
KB1 Mx:Upgrades (2)
KB1 Mx:Docs/Ilities (1)

Top Pull Request Labels

dependencies (11)
enhancement (5)
KB Aim1 Maintenance (4)
KB Aim3 Change Request (1)
KB1 Mx:Upgrades (1)
in progress (1)

Dependencies

public/browse/bower.json bower

angular 1.3.x
angular-animate 1.3.x
angular-bindonce ~0.3.3
angular-loader 1.3.x
angular-mocks ~1.3.x
angular-route 1.3.x
html5-boilerplate ~4.3.0
lunr.js ~0.5.6

public/browse/lib/angular-animate/bower.json bower

angular 1.3.5

public/browse/lib/angular-loader/bower.json bower

angular 1.3.5

public/browse/lib/angular-mocks/bower.json bower

angular 1.3.5

public/browse/lib/angular-route/bower.json bower

angular 1.3.5

public/browse/lib/lunr.js/package.json npm

dox 0.4.4 development
dox-template 0.1.1 development
phantomjs 1.8.1-3 development
uglify-js 2.4.13 development

public/browse/package.json npm

bower ^1.3.1 development
http-server ^0.6.1 development
karma ~0.10 development
karma-junit-reporter ^0.2.2 development
protractor ^1.1.1 development
shelljs ^0.2.6 development

Gemfile rubygems

brakeman >= 0 development
capistrano ~> 3.11 development
capistrano-bundler >= 0 development
capistrano-locally >= 0 development
capistrano-passenger >= 0 development
capistrano-rails ~> 1.4 development
capistrano-yarn >= 0 development
capybara >= 0 development
html2haml >= 0 development
listen >= 0 development
rspec-rails >= 0 development
rubocop >= 0 development
bootstrap ~> 4.1.0
chart-js-rails >= 0
cube-ruby >= 0
dalli >= 0
flamegraph >= 0
haml ~> 5.1
i18n >= 0
iconv >= 0
jquery-rails >= 0
jquery-ui-rails >= 0
multi_json >= 0
mysql2 = 0.5.2
newrelic_rpm >= 0
oj >= 0
ontologies_api_client >= 0
open_uri_redirections >= 0
pry >= 0
psych < 4
rack-mini-profiler >= 0
rails = 6.0.4.1
rails_autolink >= 0
rdoc >= 0
recaptcha ~> 5.9.0
rest-client >= 0
sass-rails ~> 5.0
select2-rails >= 0
stackprof >= 0
thin >= 0
uglifier >= 1.0.3
will_paginate ~> 3.0

Gemfile.lock rubygems

138 dependencies

.github/workflows/brakeman-analysis.yml actions

actions/checkout v3 composite
github/codeql-action/upload-sarif v2 composite
ruby/setup-ruby v1 composite

.github/workflows/deploy.yml actions

actions/checkout v3 composite
miloserdow/capistrano-deploy master composite
ruby/setup-ruby v1 composite

public/browse/lib/angular/bower.json bower

public/browse/lib/angular-bindonce/bower.json bower

public/browse/lib/lunr.js/bower.json bower

public/browse/lib/angular/package.json npm

public/browse/lib/angular-animate/package.json npm

public/browse/lib/angular-bindonce/package.json npm

public/browse/lib/angular-loader/package.json npm

public/browse/lib/angular-mocks/package.json npm

public/browse/lib/angular-route/package.json npm

yarn.lock npm

Score: 7.6290038896529575

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