https://github.com/nipreps/dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
https://github.com/nipreps/dmriprep
Keywords
bids bids-apps diffusion-mri magnetic-resonance-imaging preprocessing
Keywords from Contributors
brain-imaging fmri fmri-preprocessing neuroimaging
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
- Host: GitHub
- URL: https://github.com/nipreps/dmriprep
- Owner: nipreps
- License: apache-2.0
- Created: 2019-03-06T23:36:10.000Z (about 6 years ago)
- Default Branch: master
- Last Pushed: 2023-11-27T15:49:32.000Z (over 1 year ago)
- Last Synced: 2024-05-16T17:20:58.122Z (12 months ago)
- Topics: bids, bids-apps, diffusion-mri, magnetic-resonance-imaging, preprocessing
- Language: Python
- Homepage: https://www.nipreps.org/dmriprep
- Size: 115 MB
- Stars: 63
- Watchers: 13
- Forks: 23
- Open Issues: 39
- Releases: 0
-
Metadata Files:
- Readme: README.rst
- Changelog: CHANGES.rst
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Roadmap: docs/roadmap.rst
Owner metadata
- Name: NeuroImaging PREProcessing toolS
- Login: nipreps
- Email: [email protected]
- Kind: organization
- Description:
- Website: https://nipreps.org/
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/48300745?v=4
- Repositories: 46
- Last ynced at: 2024-04-18T02:20:00.739Z
- Profile URL: https://github.com/nipreps
GitHub Events
Total
- Fork event: 33
- Create event: 38
- Issues event: 143
- Release event: 11
- Watch event: 68
- Delete event: 23
- Issue comment event: 588
- Member event: 6
- Push event: 267
- Pull request review event: 92
- Pull request review comment event: 471
- Gollum event: 2
- Pull request event: 203
Last Year
- Fork event: 2
- Issue comment event: 6
- Issues event: 7
- Pull request event: 4
- Push event: 3
- Watch event: 7
Committers metadata
Last synced: about 1 year ago
Total Commits: 545
Total Committers: 17
Avg Commits per committer: 32.059
Development Distribution Score (DDS): 0.552
Commits in past year: 2
Committers in past year: 1
Avg Commits per committer in past year: 2.0
Development Distribution Score (DDS) in past year: 0.0
Name | Commits | |
---|---|---|
Oscar Esteban | c****e@o****s | 244 |
Michael Joseph | j****2@g****m | 73 |
Anisha Keshavan | a****n@g****m | 58 |
Ariel Rokem | a****m@b****u | 48 |
Adam Richie-Halford | r****d@u****u | 47 |
Salim Mansour | s****r@g****m | 28 |
pyup-bot | g****t@p****o | 21 |
Anisha Keshavan | a****a@c****g | 6 |
Derek Pisner | d****r@u****u | 6 |
Garikoitz Lerma-Usabiaga | g****z@g****m | 3 |
James D. Kent | j****t@u****u | 3 |
Celine Provins | c****s@u****h | 2 |
Anisha Keshavan | a****n | 2 |
nrajamani3 | n****3@g****u | 1 |
Erin W Dickie | e****e | 1 |
Derek Pisner | 1****s | 1 |
snyk-test | s****t@s****o | 1 |
Committer domains:
- snyk.io: 1
- gatech.edu: 1
- unil.ch: 1
- uiowa.edu: 1
- utexas.edu: 1
- childmind.org: 1
- pyup.io: 1
- uw.edu: 1
- berkeley.edu: 1
- oscaresteban.es: 1
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 46
Total pull requests: 59
Average time to close issues: 6 months
Average time to close pull requests: about 1 month
Total issue authors: 16
Total pull request authors: 9
Average comments per issue: 1.63
Average comments per pull request: 2.29
Merged pull request: 39
Bot issues: 0
Bot pull requests: 0
Past year issues: 3
Past year pull requests: 2
Past year average time to close issues: N/A
Past year average time to close pull requests: 2 months
Past year issue authors: 3
Past year pull request authors: 1
Past year average comments per issue: 0.0
Past year average comments per pull request: 0.5
Past year merged pull request: 2
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- oesteban (23)
- josephmje (4)
- arokem (2)
- esavary (2)
- GalKepler (2)
- h-w-k (2)
- levchenkoegor (2)
- alienx-zero (1)
- celprov (1)
- Clancy-wu (1)
- dPys (1)
- LangFiL (1)
- maryjis (1)
- Meryam1985 (1)
- nabaruns (1)
Top Pull Request Authors
- oesteban (31)
- josephmje (9)
- GalKepler (5)
- arokem (4)
- dPys (3)
- celprov (2)
- slimnsour (2)
- edickie (2)
- mattcieslak (1)
Top Issue Labels
- bug (8)
- impact: high (6)
- NiPreps Grant (5)
- effort: high (4)
- effort: medium (3)
- enhancement (2)
- depends: SDCFlows (2)
- impact: medium (2)
- validation / evaluation (1)
- effort: low (1)
- good first issue (1)
Top Pull Request Labels
- documentation (1)
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 100 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 8
- Total maintainers: 2
pypi.org: dmriprep
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.
- Homepage: https://github.com/nipreps/dmriprep
- Documentation: https://www.nipreps.org/dmriprep
- Licenses: Apache License, Version 2.0
- Latest release: 0.5.0 (published about 4 years ago)
- Last Synced: 2024-05-16T17:20:36.184Z (12 months ago)
- Versions: 8
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 100 Last month
-
Rankings:
- Forks count: 8.112%
- Stargazers count: 8.57%
- Dependent packages count: 10.044%
- Average: 14.575%
- Dependent repos count: 21.651%
- Downloads: 24.496%
- Maintainers (2)
Dependencies
- nbsphinx *
- nipype *
- niworkflows >=1.4.0rc5,<1.5
- packaging *
- pydot >=1.2.3
- pydotplus *
- sdcflows *
- smriprep >=0.8.0rc2
- sphinx >=2.1.2,<3.0
- sphinx-argparse *
- sphinx_rtd_theme *
- sphinxcontrib-apidoc *
- sphinxcontrib-napoleon 0dc3f28a309ad602be5f44a9049785a1026451b3
- sphinxcontrib-versioning 39b40b0b84bf872fc398feff05344051bbce0f63
- templateflow *
- toml *
- actions/checkout v2 composite
- actions/setup-python v1 composite
- ubuntu xenial-20201030 build
Score: 12.092915145570123