https://github.com/nipreps/dmriprep

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
https://github.com/nipreps/dmriprep

Keywords

bids bids-apps diffusion-mri magnetic-resonance-imaging preprocessing

Keywords from Contributors

brain-imaging fmri fmri-preprocessing neuroimaging

Last synced: 11 months ago
JSON representation

Acceptance Criteria

Repository metadata

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.


Owner metadata


GitHub Events

Total
Last Year

Committers metadata

Last synced: about 1 year ago

Total Commits: 545
Total Committers: 17
Avg Commits per committer: 32.059
Development Distribution Score (DDS): 0.552

Commits in past year: 2
Committers in past year: 1
Avg Commits per committer in past year: 2.0
Development Distribution Score (DDS) in past year: 0.0

Name Email Commits
Oscar Esteban c****e@o****s 244
Michael Joseph j****2@g****m 73
Anisha Keshavan a****n@g****m 58
Ariel Rokem a****m@b****u 48
Adam Richie-Halford r****d@u****u 47
Salim Mansour s****r@g****m 28
pyup-bot g****t@p****o 21
Anisha Keshavan a****a@c****g 6
Derek Pisner d****r@u****u 6
Garikoitz Lerma-Usabiaga g****z@g****m 3
James D. Kent j****t@u****u 3
Celine Provins c****s@u****h 2
Anisha Keshavan a****n 2
nrajamani3 n****3@g****u 1
Erin W Dickie e****e 1
Derek Pisner 1****s 1
snyk-test s****t@s****o 1

Committer domains:


Issue and Pull Request metadata

Last synced: 12 months ago

Total issues: 46
Total pull requests: 59
Average time to close issues: 6 months
Average time to close pull requests: about 1 month
Total issue authors: 16
Total pull request authors: 9
Average comments per issue: 1.63
Average comments per pull request: 2.29
Merged pull request: 39
Bot issues: 0
Bot pull requests: 0

Past year issues: 3
Past year pull requests: 2
Past year average time to close issues: N/A
Past year average time to close pull requests: 2 months
Past year issue authors: 3
Past year pull request authors: 1
Past year average comments per issue: 0.0
Past year average comments per pull request: 0.5
Past year merged pull request: 2
Past year bot issues: 0
Past year bot pull requests: 0

More stats: https://issues.ecosyste.ms/repositories/lookup?url=https://github.com/nipreps/dmriprep

Top Issue Authors

  • oesteban (23)
  • josephmje (4)
  • arokem (2)
  • esavary (2)
  • GalKepler (2)
  • h-w-k (2)
  • levchenkoegor (2)
  • alienx-zero (1)
  • celprov (1)
  • Clancy-wu (1)
  • dPys (1)
  • LangFiL (1)
  • maryjis (1)
  • Meryam1985 (1)
  • nabaruns (1)

Top Pull Request Authors

  • oesteban (31)
  • josephmje (9)
  • GalKepler (5)
  • arokem (4)
  • dPys (3)
  • celprov (2)
  • slimnsour (2)
  • edickie (2)
  • mattcieslak (1)

Top Issue Labels

  • bug (8)
  • impact: high (6)
  • NiPreps Grant (5)
  • effort: high (4)
  • effort: medium (3)
  • enhancement (2)
  • depends: SDCFlows (2)
  • impact: medium (2)
  • validation / evaluation (1)
  • effort: low (1)
  • good first issue (1)

Top Pull Request Labels

  • documentation (1)

Package metadata

pypi.org: dmriprep

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data.

  • Homepage: https://github.com/nipreps/dmriprep
  • Documentation: https://www.nipreps.org/dmriprep
  • Licenses: Apache License, Version 2.0
  • Latest release: 0.5.0 (published about 4 years ago)
  • Last Synced: 2024-05-16T17:20:36.184Z (12 months ago)
  • Versions: 8
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 100 Last month
  • Rankings:
    • Forks count: 8.112%
    • Stargazers count: 8.57%
    • Dependent packages count: 10.044%
    • Average: 14.575%
    • Dependent repos count: 21.651%
    • Downloads: 24.496%
  • Maintainers (2)

Dependencies

docs/requirements.txt pypi
  • nbsphinx *
  • nipype *
  • niworkflows >=1.4.0rc5,<1.5
  • packaging *
  • pydot >=1.2.3
  • pydotplus *
  • sdcflows *
  • smriprep >=0.8.0rc2
  • sphinx >=2.1.2,<3.0
  • sphinx-argparse *
  • sphinx_rtd_theme *
  • sphinxcontrib-apidoc *
  • sphinxcontrib-napoleon 0dc3f28a309ad602be5f44a9049785a1026451b3
  • sphinxcontrib-versioning 39b40b0b84bf872fc398feff05344051bbce0f63
  • templateflow *
  • toml *
.github/workflows/pythonpackage.yml actions
  • actions/checkout v2 composite
  • actions/setup-python v1 composite
Dockerfile docker
  • ubuntu xenial-20201030 build

Score: 12.092915145570123