https://github.com/leonweber/pedl
Search the biomedical literature for protein interactions and protein associations
https://github.com/leonweber/pedl
Keywords
bioinformatics deep-learning protein-protein-interaction text-mining
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Search the biomedical literature for protein interactions and protein associations
- Host: GitHub
- URL: https://github.com/leonweber/pedl
- Owner: leonweber
- Created: 2020-05-12T13:52:58.000Z (almost 5 years ago)
- Default Branch: main
- Last Pushed: 2023-11-24T10:58:30.000Z (over 1 year ago)
- Last Synced: 2024-05-28T11:13:48.772Z (12 months ago)
- Topics: bioinformatics, deep-learning, protein-protein-interaction, text-mining
- Language: Python
- Homepage:
- Size: 11.3 MB
- Stars: 11
- Watchers: 3
- Forks: 2
- Open Issues: 1
- Releases: 0
-
Metadata Files:
- Readme: README.md
Owner metadata
- Name: Leon Weber
- Login: leonweber
- Email:
- Kind: user
- Description: Post(Doc [not yet]) @mainlp. Interested in human-in-the-loop methods and biomedical NLP.
- Website: https://leonweber.me
- Location: Nürnberg
- Twitter:
- Company: LMU Munich
- Icon url: https://avatars.githubusercontent.com/u/6436442?u=db50317a95fd0e7430ac2c91839ac73c54fec647&v=4
- Repositories: 8
- Last ynced at: 2023-03-09T08:45:39.447Z
- Profile URL: https://github.com/leonweber
GitHub Events
Total
- Release event: 4
- Watch event: 17
- Delete event: 11
- Member event: 1
- Public event: 2
- Push event: 95
- Pull request event: 13
- Fork event: 4
- Create event: 18
Last Year
- Create event: 4
- Delete event: 7
- Fork event: 1
- Pull request event: 4
- Push event: 15
- Watch event: 5
Committers metadata
Last synced: over 1 year ago
Total Commits: 108
Total Committers: 6
Avg Commits per committer: 18.0
Development Distribution Score (DDS): 0.389
Commits in past year: 44
Committers in past year: 4
Avg Commits per committer in past year: 11.0
Development Distribution Score (DDS) in past year: 0.364
| Name | Commits | |
|---|---|---|
| Leon Weber | l****r@p****e | 66 |
| barthfab | b****b@i****e | 18 |
| Fabio Barth | f****h@g****e | 9 |
| Leon Weber | l****r | 8 |
| Fabio Barth | 8****b | 6 |
| Fabio Barth | b****b@g****e | 1 |
Committer domains:
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 0
Total pull requests: 7
Average time to close issues: N/A
Average time to close pull requests: about 2 months
Total issue authors: 0
Total pull request authors: 3
Average comments per issue: 0
Average comments per pull request: 0.0
Merged pull request: 5
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 2
Past year average time to close issues: N/A
Past year average time to close pull requests: 2 months
Past year issue authors: 0
Past year pull request authors: 2
Past year average comments per issue: 0
Past year average comments per pull request: 0.0
Past year merged pull request: 1
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
Top Pull Request Authors
- barthfab (3)
- leonweber (3)
- TrellixVulnTeam (1)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 42 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 8
- Total maintainers: 1
pypi.org: pedl
Search the biomedical literature for protein interactions andprotein associations.
- Homepage: https://github.com/leonweber/pedl
- Documentation: https://pedl.readthedocs.io/
- Licenses: MIT
- Latest release: 1.0.2 (published over 1 year ago)
- Last Synced: 2024-05-28T04:20:51.105Z (12 months ago)
- Versions: 8
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 42 Last month
-
Rankings:
- Dependent packages count: 10.027%
- Stargazers count: 17.682%
- Average: 20.287%
- Dependent repos count: 21.67%
- Forks count: 22.608%
- Downloads: 29.448%
- Maintainers (1)
Dependencies
- bioc *
- diskcache *
- lxml *
- numpy *
- requests *
- segtok *
- torch >=1.8
- tqdm *
- transformers >=4.6
Score: 8.060855752934316