https://github.com/volume-em/empanada
Panoptic segmentation algorithms for 2D and 3D electron microscopy images
https://github.com/volume-em/empanada
Keywords
deep-learning electron-microscopy instance-segmentation panoptic-segmentation pytorch segmentation semantic-segmentation
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Panoptic segmentation algorithms for 2D and 3D electron microscopy images
- Host: GitHub
- URL: https://github.com/volume-em/empanada
- Owner: volume-em
- License: gpl-2.0
- Created: 2021-12-01T16:02:54.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2023-02-25T22:56:09.000Z (about 2 years ago)
- Last Synced: 2024-05-16T20:00:12.617Z (12 months ago)
- Topics: deep-learning, electron-microscopy, instance-segmentation, panoptic-segmentation, pytorch, segmentation, semantic-segmentation
- Language: Python
- Homepage: https://empanada.readthedocs.io/en/latest/index.html
- Size: 25.6 MB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 6
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: volume-em
- Login: volume-em
- Email:
- Kind: organization
- Description:
- Website:
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/66926188?v=4
- Repositories: 9
- Last ynced at: 2024-04-24T02:33:02.634Z
- Profile URL: https://github.com/volume-em
GitHub Events
Total
- Create event: 16
- Release event: 1
- Issues event: 8
- Watch event: 12
- Delete event: 5
- Issue comment event: 8
- Public event: 2
- Push event: 84
- Pull request event: 19
- Fork event: 2
Last Year
- Fork event: 1
- Issue comment event: 1
- Issues event: 1
- Public event: 1
- Watch event: 4
Committers metadata
Last synced: 12 months ago
Total Commits: 151
Total Committers: 4
Avg Commits per committer: 37.75
Development Distribution Score (DDS): 0.073
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Ryan William Conrad | c****w@n****v | 140 |
| conradry | c****y@b****u | 7 |
| Ryan Conrad | c****1@g****m | 3 |
| Conrad | c****w@f****v | 1 |
Committer domains:
- fnm-s097536.nih.gov: 1
- bc.edu: 1
- nih.gov: 1
Issue and Pull Request metadata
Last synced: over 1 year ago
Total issues: 6
Total pull requests: 16
Average time to close issues: about 1 month
Average time to close pull requests: about 16 hours
Total issue authors: 6
Total pull request authors: 2
Average comments per issue: 1.0
Average comments per pull request: 0.38
Merged pull request: 13
Bot issues: 0
Bot pull requests: 0
Past year issues: 1
Past year pull requests: 1
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 1
Past year average comments per issue: 0.0
Past year average comments per pull request: 0.0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- analle (1)
- berombau (1)
- goanpeca (1)
- romainGuiet (1)
- saskra (1)
- T3chbug (1)
Top Pull Request Authors
- conradry (15)
- GenevieveBuckley (1)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 2
-
Total downloads:
- pypi: 208 last-month
- Total dependent packages: 3 (may contain duplicates)
- Total dependent repositories: 1 (may contain duplicates)
- Total versions: 9
- Total maintainers: 2
pypi.org: empanada-dl
Algorithms for Panoptic Segmentation of organelles in EM
- Homepage: https://github.com/volume-em/empanada
- Documentation: https://github.com/volume-em/empanada
- Licenses: BSD-3-Clause
- Latest release: 0.1.7 (published over 2 years ago)
- Last Synced: 2024-06-07T19:43:03.619Z (11 months ago)
- Versions: 7
- Dependent Packages: 3
- Dependent Repositories: 1
- Downloads: 208 Last month
-
Rankings:
- Dependent packages count: 10.06%
- Downloads: 10.204%
- Average: 15.737%
- Stargazers count: 17.684%
- Forks count: 19.105%
- Dependent repos count: 21.634%
- Maintainers (2)
conda-forge.org: empanada-dl
- Homepage: https://github.com/volume-em/empanada
- Licenses: GPL-2.0-only
- Latest release: 0.1.7 (published over 2 years ago)
- Last Synced: 2024-06-07T07:01:29.995Z (11 months ago)
- Versions: 2
- Dependent Packages: 0
- Dependent Repositories: 0
-
Rankings:
- Dependent repos count: 34.025%
- Average: 49.88%
- Dependent packages count: 51.175%
- Stargazers count: 56.95%
- Forks count: 57.37%
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- pydata-sphinx-theme *
- sphinx *
- sphinx-autobuild *
- albumentations >=1.2
- cztile *
- mlflow *
- numba >=0.54
- numpy >=1.20
- opencv-python >=4.5.3
- pyyaml *
- scikit-image >=0.19
- torch >=1.10
- torchvision >=0.2
- zarr >=2.12
Score: 8.698180525197055