https://github.com/chrovis/cljam
A DNA Sequence Alignment/Map (SAM) library for Clojure
https://github.com/chrovis/cljam
Keywords
2bit bam bcf bed bigwig bioinformatics clojure fasta fastq genomics gff sam vcf wig
Keywords from Contributors
transforms profiling measur archiving observation conversion animals compose optimize generic
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
A DNA Sequence Alignment/Map (SAM) library for Clojure
- Host: GitHub
- URL: https://github.com/chrovis/cljam
- Owner: chrovis
- License: apache-2.0
- Created: 2014-01-08T09:52:14.000Z (over 11 years ago)
- Default Branch: master
- Last Pushed: 2024-04-23T08:49:23.000Z (about 1 year ago)
- Last Synced: 2024-04-23T09:45:10.367Z (about 1 year ago)
- Topics: 2bit, bam, bcf, bed, bigwig, bioinformatics, clojure, fasta, fastq, genomics, gff, sam, vcf, wig
- Language: Clojure
- Homepage: https://chrovis.github.io/cljam
- Size: 35.1 MB
- Stars: 88
- Watchers: 11
- Forks: 12
- Open Issues: 10
- Releases: 0
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- License: LICENSE
- Codeowners: .github/CODEOWNERS
Owner metadata
- Name: Chrovis
- Login: chrovis
- Email: [email protected]
- Kind: organization
- Description: Genomic intelligence based on advanced computing by @xcoo
- Website: https://chrov.is
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/6347908?v=4
- Repositories: 9
- Last ynced at: 2023-08-09T09:58:27.884Z
- Profile URL: https://github.com/chrovis
Committers metadata
Last synced: about 1 year ago
Total Commits: 1,270
Total Committers: 17
Avg Commits per committer: 74.706
Development Distribution Score (DDS): 0.679
Commits in past year: 73
Committers in past year: 4
Avg Commits per committer in past year: 18.25
Development Distribution Score (DDS) in past year: 0.411
| Name | Commits | |
|---|---|---|
| Toshiki TAKEUCHI | t****e@x****p | 408 |
| alumi | a****i | 325 |
| Takashi AOKI | f****n@m****m | 111 |
| Jun Imura | i****a@x****p | 64 |
| r6eve | r****f@g****m | 59 |
| niyarin | i****t@g****m | 58 |
| atsuo yamada | y****t@t****p | 51 |
| Shogo Ohta | s****o@x****p | 47 |
| dependabot[bot] | 4****] | 41 |
| atsuo yamada | y****2@t****p | 34 |
| Shogo Ohta | a****0@g****m | 30 |
| Takashi AOKI | me@t****h | 22 |
| yito88 | y****i@p****m | 9 |
| Tomoki Matsuda | t****a@x****p | 7 |
| Komazaki Kei | k****i@x****p | 2 |
| Atsushi Kitahara | k****c@g****m | 1 |
| Ryutaro Nagata | r****a@x****p | 1 |
Committer domains:
- xcoo.jp: 6
- tir.jp: 2
- phact-columba.com: 1
- tak.sh: 1
- me.com: 1
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 17
Total pull requests: 125
Average time to close issues: 8 months
Average time to close pull requests: 13 days
Total issue authors: 8
Total pull request authors: 12
Average comments per issue: 1.53
Average comments per pull request: 1.86
Merged pull request: 116
Bot issues: 0
Bot pull requests: 44
Past year issues: 6
Past year pull requests: 34
Past year average time to close issues: 3 months
Past year average time to close pull requests: 21 days
Past year issue authors: 5
Past year pull request authors: 5
Past year average comments per issue: 1.17
Past year average comments per pull request: 1.79
Past year merged pull request: 31
Past year bot issues: 0
Past year bot pull requests: 6
Top Issue Authors
- athos (5)
- alumi (3)
- niyarin (3)
- totakke (2)
- ayamada (1)
- dotinspace (1)
- indraniel (1)
- nuggetoriniku (1)
Top Pull Request Authors
- dependabot[bot] (44)
- niyarin (23)
- athos (21)
- alumi (18)
- r6eve (7)
- matsutomo81 (5)
- nuggetoriniku (2)
- DaGaMs (1)
- xckitahara (1)
- niyarin-another (1)
- totakke (1)
- k-kom (1)
Top Issue Labels
- enhancement (5)
- bug (4)
Top Pull Request Labels
- dependencies (45)
- enhancement (16)
- bug (12)
Package metadata
- Total packages: 1
-
Total downloads:
- clojars: 17,635 total
- Total dependent packages: 1
- Total dependent repositories: 1
- Total versions: 26
- Total maintainers: 1
clojars.org: cljam
A DNA Sequence Alignment/Map (SAM) library for Clojure
- Homepage: https://github.com/chrovis/cljam
- Documentation: https://cljdoc.org/d/cljam/
- Licenses: Apache License, Version 2.0
- Latest release: 0.8.4 (published about 2 years ago)
- Last Synced: 2024-05-23T02:16:50.699Z (12 months ago)
- Versions: 26
- Dependent Packages: 1
- Dependent Repositories: 1
- Downloads: 17,635 Total
-
Rankings:
- Dependent packages count: 4.696%
- Average: 11.222%
- Downloads: 11.317%
- Forks count: 12.782%
- Stargazers count: 13.297%
- Dependent repos count: 14.019%
- Maintainers (1)
Dependencies
- actions/cache v3 composite
- actions/checkout v3 composite
- codecov/codecov-action v3 composite
- actions/cache v3 composite
- actions/checkout v3 composite
- actions/setup-java v3 composite
- actions/checkout v3 composite
- xcoo/clj-lint-action v1.1.11 composite
- actions/cache v3 composite
- actions/checkout v3 composite
- actions/setup-java v3 composite
Score: 17.195991767174913