https://github.com/ruibin-liu/moldf
Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
https://github.com/ruibin-liu/moldf
Keywords
atomselection bioinformatics mmcif mol2 pandas pdb-parser python
Keywords from Contributors
interactome energy-system-model molecular-dynamics-simulations biology uniprot hilbert-curve morton-order n-body-simulation space-filling-curves spatial-data
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
- Host: GitHub
- URL: https://github.com/ruibin-liu/moldf
- Owner: Ruibin-Liu
- License: mit
- Created: 2023-01-04T17:50:05.000Z (over 2 years ago)
- Default Branch: main
- Last Pushed: 2024-04-29T23:01:24.000Z (about 1 year ago)
- Last Synced: 2024-06-03T08:03:06.574Z (11 months ago)
- Topics: atomselection, bioinformatics, mmcif, mol2, pandas, pdb-parser, python
- Language: Python
- Homepage: https://moldf.readthedocs.io/en/latest/
- Size: 2.37 MB
- Stars: 7
- Watchers: 3
- Forks: 1
- Open Issues: 5
- Releases: 0
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Code of conduct: CODE_OF_CONDUCT.md
Owner metadata
- Name: Ruibin Liu
- Login: Ruibin-Liu
- Email:
- Kind: user
- Description: Computational Chemistry
- Website:
- Location: MD
- Twitter:
- Company: University of Maryland School of Pharmacy
- Icon url: https://avatars.githubusercontent.com/u/7396003?u=1d60948905a383107abc2f575f78acaa7065cfe4&v=4
- Repositories: 31
- Last ynced at: 2024-04-23T22:21:21.169Z
- Profile URL: https://github.com/Ruibin-Liu
GitHub Events
Total
- Create event: 12
- Issues event: 2
- Release event: 6
- Watch event: 5
- Delete event: 6
- Issue comment event: 3
- Push event: 60
- Pull request review event: 1
- Pull request event: 20
- Fork event: 1
Last Year
- Create event: 12
- Delete event: 6
- Fork event: 1
- Issue comment event: 3
- Issues event: 2
- Pull request event: 20
- Pull request review event: 1
- Push event: 60
- Release event: 6
- Watch event: 5
Committers metadata
Last synced: over 1 year ago
Total Commits: 260
Total Committers: 4
Avg Commits per committer: 65.0
Development Distribution Score (DDS): 0.092
Commits in past year: 229
Committers in past year: 4
Avg Commits per committer in past year: 57.25
Development Distribution Score (DDS) in past year: 0.1
| Name | Commits | |
|---|---|---|
| Ruibin Liu | r****d@g****m | 236 |
| pre-commit-ci[bot] | 6****] | 18 |
| Ruibin Liu | r****8@g****m | 5 |
| Jihun Jeung | j****n@g****r | 1 |
Committer domains:
Issue and Pull Request metadata
Last synced: 11 months ago
Total issues: 6
Total pull requests: 26
Average time to close issues: 13 days
Average time to close pull requests: 6 days
Total issue authors: 2
Total pull request authors: 3
Average comments per issue: 1.0
Average comments per pull request: 0.08
Merged pull request: 25
Bot issues: 0
Bot pull requests: 16
Past year issues: 5
Past year pull requests: 20
Past year average time to close issues: 13 days
Past year average time to close pull requests: 2 days
Past year issue authors: 2
Past year pull request authors: 3
Past year average comments per issue: 0.4
Past year average comments per pull request: 0.1
Past year merged pull request: 19
Past year bot issues: 0
Past year bot pull requests: 14
Top Issue Authors
- Ruibin-Liu (5)
- kamurani (1)
Top Pull Request Authors
- pre-commit-ci[bot] (16)
- Ruibin-Liu (9)
- jihunni (1)
Top Issue Labels
- enhancement (4)
- good first issue (3)
- help wanted (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 44 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 6
- Total maintainers: 1
pypi.org: moldf
Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
- Homepage: https://github.com/Ruibin-Liu/MolDF
- Documentation: https://moldf.readthedocs.io/en/stable/
- Licenses: MIT License
- Latest release: 0.7.5 (published over 1 year ago)
- Last Synced: 2024-06-03T15:02:35.814Z (11 months ago)
- Versions: 6
- Dependent Packages: 0
- Dependent Repositories: 0
- Downloads: 44 Last month
-
Rankings:
- Dependent packages count: 7.366%
- Average: 38.093%
- Dependent repos count: 68.819%
- Maintainers (1)
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- pandas >=1.0
- pytest >=7.0 development
- pytest-cov >=3.0 development
- tox >=3.24 development
- actions/checkout v2 composite
- actions/create-release v1 composite
- actions/setup-python v2 composite
- actions/upload-release-asset v1 composite
- pypa/gh-action-pypi-publish master composite
- furo *
- numpy *
- pandas *
- scipy *
- sphinx *
- sphinx-copybutton *
- typing_extensions *
Score: 7.67786350067821