https://github.com/gibsramen/xebec
Snakemake pipeline for microbiome diversity effect size benchmarking
https://github.com/gibsramen/xebec
Keywords
bioinformatics microbiome pipeline snakemake
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Snakemake pipeline for microbiome diversity effect size benchmarking
- Host: GitHub
- URL: https://github.com/gibsramen/xebec
- Owner: gibsramen
- License: bsd-3-clause
- Created: 2022-03-22T20:27:18.000Z (about 3 years ago)
- Default Branch: main
- Last Pushed: 2023-05-16T21:33:16.000Z (almost 2 years ago)
- Last Synced: 2024-05-31T01:08:43.481Z (11 months ago)
- Topics: bioinformatics, microbiome, pipeline, snakemake
- Language: Python
- Homepage:
- Size: 3.62 MB
- Stars: 5
- Watchers: 3
- Forks: 2
- Open Issues: 0
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: Gibs
- Login: gibsramen
- Email:
- Kind: user
- Description: UCSD Bioinformatics PhD Candidate. I don't actually know how to code - I just type into Microsoft Paint and sometimes things happen.
- Website: gibsramen.github.io
- Location: San Diego, CA
- Twitter: gibsramen
- Company:
- Icon url: https://avatars.githubusercontent.com/u/4030868?u=2d6b72265e749487ff39f702fabb0d32543b9f49&v=4
- Repositories: 10
- Last ynced at: 2023-03-04T02:34:44.357Z
- Profile URL: https://github.com/gibsramen
GitHub Events
Total
- Release event: 4
- Watch event: 6
- Delete event: 7
- Issue comment event: 2
- Push event: 62
- Pull request review comment event: 2
- Pull request review event: 3
- Pull request event: 26
- Fork event: 2
- Create event: 19
Last Year
- Fork event: 1
Committers metadata
Last synced: about 1 year ago
Total Commits: 119
Total Committers: 2
Avg Commits per committer: 59.5
Development Distribution Score (DDS): 0.076
Commits in past year: 9
Committers in past year: 2
Avg Commits per committer in past year: 4.5
Development Distribution Score (DDS) in past year: 0.111
| Name | Commits | |
|---|---|---|
| Gibraan Rahman | g****n@e****u | 110 |
| Yang Chen | 6****2 | 9 |
Committer domains:
- eng.ucsd.edu: 1
Issue and Pull Request metadata
Last synced: 11 months ago
Total issues: 0
Total pull requests: 14
Average time to close issues: N/A
Average time to close pull requests: 1 day
Total issue authors: 0
Total pull request authors: 2
Average comments per issue: 0
Average comments per pull request: 0.21
Merged pull request: 13
Bot issues: 0
Bot pull requests: 0
Past year issues: 0
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 0
Past year pull request authors: 0
Past year average comments per issue: 0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
Top Pull Request Authors
- gibsramen (11)
- yangchen2 (3)
Top Issue Labels
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 51 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 2
- Total maintainers: 1
pypi.org: xebec
Snakemake pipeline for microbiome diversity effect size benchmarking.
- Homepage: https://github.com/gibsramen/xebec
- Documentation: https://xebec.readthedocs.io/
- Licenses: BSD-3-Clause
- Latest release: 0.5.1 (published almost 3 years ago)
- Last Synced: 2024-05-31T01:00:48.822Z (11 months ago)
- Versions: 2
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 51 Last month
-
Rankings:
- Dependent packages count: 10.119%
- Dependent repos count: 21.545%
- Stargazers count: 21.572%
- Forks count: 22.645%
- Average: 29.464%
- Downloads: 71.44%
- Maintainers (1)
Dependencies
- bokeh *
- click *
- evident >=0.4.0
- gemelli >=0.0.8
- h5py ==3.1.0
- jinja2 *
- numpy *
- pandas >=1.0.0
- scikit-bio >=0.5.6
- seaborn *
- snakemake *
- unifrac *
- actions/checkout v2 composite
- conda-incubator/setup-miniconda v2 composite
Score: 6.272877006546167