https://github.com/bishop-laboratory/rlpipes
RLPipes: A standardized R-loop-mapping pipeline.
https://github.com/bishop-laboratory/rlpipes
Keywords
bioinformatics ngs pipeline r-loop snakemake
Last synced: about 1 year ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
RLPipes: A standardized R-loop-mapping pipeline.
- Host: GitHub
- URL: https://github.com/bishop-laboratory/rlpipes
- Owner: Bishop-Laboratory
- License: mit
- Created: 2020-06-03T12:55:35.000Z (about 5 years ago)
- Default Branch: main
- Last Pushed: 2024-05-22T15:51:34.000Z (about 1 year ago)
- Last Synced: 2024-05-22T16:35:07.032Z (about 1 year ago)
- Topics: bioinformatics, ngs, pipeline, r-loop, snakemake
- Language: Python
- Homepage: https://anaconda.org/bioconda/rlpipes
- Size: 49.6 MB
- Stars: 3
- Watchers: 5
- Forks: 1
- Open Issues: 13
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: Bishop Laboratory (@UT Health SA)
- Login: Bishop-Laboratory
- Email: [email protected]
- Kind: organization
- Description: Multidisciplinary Research Team at UT Health SA
- Website: http://gccri.bishop-lab.uthscsa.edu/
- Location:
- Twitter:
- Company:
- Icon url: https://avatars.githubusercontent.com/u/75179831?v=4
- Repositories: 16
- Last ynced at: 2023-03-06T18:51:08.842Z
- Profile URL: https://github.com/Bishop-Laboratory
GitHub Events
Total
- Create event: 5
- Release event: 1
- Issues event: 38
- Watch event: 3
- Delete event: 2
- Member event: 1
- Issue comment event: 39
- Public event: 1
- Push event: 28
- Pull request event: 4
- Fork event: 1
Last Year
- Create event: 2
- Issue comment event: 2
- Issues event: 1
- Push event: 2
- Release event: 1
- Watch event: 1
Committers metadata
Last synced: about 1 year ago
Total Commits: 246
Total Committers: 4
Avg Commits per committer: 61.5
Development Distribution Score (DDS): 0.354
Commits in past year: 0
Committers in past year: 0
Avg Commits per committer in past year: 0.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| millerh1 | m****1@l****u | 159 |
| Henry Miller | 4****1 | 73 |
| Daniel Montemayor | d****r | 13 |
| Daniel Montemayor | d****r@g****m | 1 |
Committer domains:
Issue and Pull Request metadata
Last synced: about 1 year ago
Total issues: 70
Total pull requests: 21
Average time to close issues: 2 months
Average time to close pull requests: about 17 hours
Total issue authors: 7
Total pull request authors: 1
Average comments per issue: 0.8
Average comments per pull request: 0.14
Merged pull request: 20
Bot issues: 0
Bot pull requests: 0
Past year issues: 1
Past year pull requests: 0
Past year average time to close issues: N/A
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 0
Past year average comments per issue: 1.0
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- millerh1 (60)
- markdunning (4)
- dmontemayor (2)
- CicadaDennis (1)
- joshtburdick (1)
- LeoColmet-Daage (1)
- pradyumnasagar (1)
Top Pull Request Authors
- millerh1 (21)
Top Issue Labels
- enhancement (21)
- bug (10)
- v0.9.0 (5)
- analysis (5)
- advanced (3)
- intermediate (3)
- research needed (3)
- documentation (2)
- R (2)
- Python (2)
- beginner (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 43 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 5
- Total maintainers: 1
pypi.org: rlpipes
A standardized R-loop-mapping pipeline
- Homepage: https://github.com/Bishop-Laboratory/RLPipes
- Documentation: https://rlpipes.readthedocs.io/
- Licenses: MIT
- Latest release: 0.9.3 (published almost 3 years ago)
- Last Synced: 2024-05-22T15:47:21.969Z (about 1 year ago)
- Versions: 5
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 43 Last month
-
Rankings:
- Dependent packages count: 10.119%
- Dependent repos count: 21.545%
- Forks count: 22.645%
- Average: 23.25%
- Stargazers count: 25.064%
- Downloads: 36.879%
- Maintainers (1)
Dependencies
- Click *
- pandas ==1.2.0
- pyfastx *
- pysam >=0.17.0
- pysradb *
- actions/checkout v2 composite
- codecov/codecov-action v2 composite
- conda-incubator/setup-miniconda v2 composite
Score: 7.965545573129991