https://github.com/glarue/intronic
Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.
https://github.com/glarue/intronic
Keywords
annotated-intron-sequences annotated-introns annotation bioinformatics classification genome intron intron-classification intron-sequences minor-intron python sequence-classification svm u12-type
Last synced: 11 months ago
JSON representation
Acceptance Criteria
- Revelant topics? true
- External users? true
- Open source license? true
- Active? true
- Fork? false
Repository metadata
Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type) using a support vector-machine model.
- Host: GitHub
- URL: https://github.com/glarue/intronic
- Owner: glarue
- License: gpl-3.0
- Created: 2020-05-25T15:49:23.000Z (almost 5 years ago)
- Default Branch: main
- Last Pushed: 2024-01-12T21:10:51.000Z (over 1 year ago)
- Last Synced: 2024-05-29T01:43:08.002Z (12 months ago)
- Topics: annotated-intron-sequences, annotated-introns, annotation, bioinformatics, classification, genome, intron, intron-classification, intron-sequences, minor-intron, python, sequence-classification, svm, u12-type
- Language: Python
- Homepage:
- Size: 34.1 MB
- Stars: 6
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Owner metadata
- Name: Graham Larue
- Login: glarue
- Email:
- Kind: user
- Description: Bioinformatician
- Website:
- Location: Petaluma, CA
- Twitter: egrahamlarue
- Company: @mammothdx
- Icon url: https://avatars.githubusercontent.com/u/6827531?u=1c233c034663b79904e2e37b45db669d83b80a07&v=4
- Repositories: 3
- Last ynced at: 2023-03-02T23:55:40.296Z
- Profile URL: https://github.com/glarue
GitHub Events
Total
- Create event: 47
- Issues event: 6
- Release event: 13
- Watch event: 5
- Delete event: 20
- Issue comment event: 14
- Push event: 97
- Public event: 1
- Pull request event: 2
- Gollum event: 37
Last Year
- Create event: 2
- Issue comment event: 12
- Issues event: 4
- Push event: 2
- Release event: 2
- Watch event: 1
Committers metadata
Last synced: 12 months ago
Total Commits: 173
Total Committers: 1
Avg Commits per committer: 173.0
Development Distribution Score (DDS): 0.0
Commits in past year: 4
Committers in past year: 1
Avg Commits per committer in past year: 4.0
Development Distribution Score (DDS) in past year: 0.0
| Name | Commits | |
|---|---|---|
| Graham Larue | e****e@g****m | 173 |
Committer domains:
Issue and Pull Request metadata
Last synced: 12 months ago
Total issues: 3
Total pull requests: 1
Average time to close issues: 2 days
Average time to close pull requests: less than a minute
Total issue authors: 2
Total pull request authors: 1
Average comments per issue: 4.33
Average comments per pull request: 0.0
Merged pull request: 1
Bot issues: 0
Bot pull requests: 0
Past year issues: 2
Past year pull requests: 0
Past year average time to close issues: 3 days
Past year average time to close pull requests: N/A
Past year issue authors: 1
Past year pull request authors: 0
Past year average comments per issue: 5.5
Past year average comments per pull request: 0
Past year merged pull request: 0
Past year bot issues: 0
Past year bot pull requests: 0
Top Issue Authors
- MichaelHiller (2)
- RocesV (1)
Top Pull Request Authors
- glarue (1)
Top Issue Labels
- bug (1)
Top Pull Request Labels
Package metadata
- Total packages: 1
-
Total downloads:
- pypi: 67 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 28
- Total maintainers: 1
pypi.org: intronic
Retrieve annotated intron sequences and classify them as minor (U12-type) or major (U2-type)
- Homepage: https://github.com/glarue/intronIC/
- Documentation: https://intronic.readthedocs.io/
- Licenses: GPL v3.0
- Latest release: 1.5.2 (published over 1 year ago)
- Last Synced: 2024-05-28T12:43:18.769Z (12 months ago)
- Versions: 28
- Dependent Packages: 0
- Dependent Repositories: 1
- Downloads: 67 Last month
-
Rankings:
- Dependent packages count: 10.119%
- Dependent repos count: 21.545%
- Stargazers count: 21.572%
- Average: 23.594%
- Forks count: 29.791%
- Downloads: 34.942%
- Maintainers (1)
Dependencies
Score: 6.025865973825315