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Recent Releases of SITS

SITS - Version 1.5.2

What's new in SITS version 1.5.2

  • Include exclusion_mask parameter in sits_classify() and sits_smooth()
  • Support classification data cubes with NA values
  • Support for multiple tiling system in sits_regularize(), including MGRS and Brazil Data Cube grids
  • Review sits_merge() implementation to better handle multiple scenario cases
  • Support roi when plotting data cubes
  • Refactor sits_cube_copy() to improve timeout handling and efficiency
  • Include filtering by tiles in regularization operation
  • Include start and end dates for each collection in sits_list_collections()
  • Add support to SpatExtent object from terra as roi in sits_cube()
  • Update crs usage in sits_get_data() to support WKT
  • Implement Sakoe-Chiba approximation for DTW algorithm
  • Support for tmap version 4.0
  • Enhance performance and usability in visualization functions
  • Enhance sits_classify() performance with segments classification
  • Support for interactive visualization with SOM samples
  • General bug fixes

Natural Resources - Soil and Land - R
Published by OldLipe 3 months ago

SITS - Version 1.5.1

What's new in SITS version 1.5.1

  • Support for ESA World Cover map
  • Support for Digital Earth Australia products
  • Support for Digital Earth Africa geomedian products
  • Support for PLANET Mosaic products
  • Improve .netrc access to Harmonized Landsat-Sentinel cubes with earthdatalogin package
  • Use ROI to cut data cube after mosaic operation
  • Support for raster and vector classification using DEM as base cubes
  • Convert from httr package to httr2 package
  • Remove deprecated class to purrr::map_dfc, purrr::map_dfr and similar
  • Fix tuning for torch models
  • Add geometry validation when extracting time series
  • Add multicores processing support for active learning sampling methods
  • Remove tapply from .reg_cube_split_assets() for R 4.X compatibility
  • Fix sits_merge() function that was not merging SAR and OPTICAL cubes
  • In models API, the n_input_pixels parameter was renamed back to input_pixels for compatibility with models trained in old versions of the package
  • Fix torch usage in Apple M3
  • Fix date parameter usage in sits_view()
  • Improve plot() performance using raster overviews

Natural Resources - Soil and Land - R
Published by M3nin0 8 months ago

SITS - Version 1.5.0-1

Hotfix version 1.5.0-1

  • Add multicores processing support for active learning sampling methods
  • Remove tapply from .reg_cube_split_assets() for R 4.X compatibility
  • Fix sits_merge() function that was not merging SAR and OPTICAL cubes
  • Rename n_input_pixels back to input_pixels for compatibility with models trained in old versions of the package
  • Fix torch usage in Apple M3 by turning off MPS technology
  • Fix date parameter usage in sits_view()
  • Improve plot() performance using raster overviews
  • Include support for PLANET Mosaic product

Natural Resources - Soil and Land - R
Published by OldLipe 11 months ago

SITS - Version 1.5.0

What's new in SITS version 1.5.0

  • Include dtw distance when building SOM maps
  • Support for SENTINEL-1-RTC and SENTINEL-2-L2A in CDSE
  • Include support for DEA products SENTINEL-1-RTC, LS5-SR, LS7-SR, LS9-SR, ALOS-PALSAR-MOSAIC, NDVI ANOMALY, DAILY CHIRPS, MONTHLY CHIRPS and DEM-30
  • Support for Sentinel-1 GRD and RTC collections from Planetary Computer
  • Include parameter tile to select data from Sentinel-1 (MPC)
  • Include parameter tile to select data from Sentinel-1 and Sentinel-2 (DEAFRICA)
  • Include parameter tile to select data from HLS collections
  • Improved support for GPU-based classification of deep learning models
  • Support for non-normalized derived indexes
  • Support for shapefiles as ROI in sits_cube()
  • Fix inconsistencies in HLS scale factors
  • New function to obtain ROI based on MGRS tiles
  • Add support for uncertainty cubes in sits_mosaic()
  • Improve performance of sits_segment() using chunk parallelization
  • Include uncertainty measures for vector probability cubes
  • New sits_clean() function to improve classified maps
  • New functions sits_sampling_design() and sits_stratified_sampling()
  • New sits_reduce() function

Natural Resources - Soil and Land - R
Published by OldLipe 12 months ago

SITS - Version 1.4.2-3

Hotfix version 1.4.2-3

  • Fix font download in package initialization

Natural Resources - Soil and Land - R
Published by OldLipe over 1 year ago

SITS - Version 1.4.2-2

Hotfix version 1.4.2-2

  • Fix integer overflow bug in sits_classify() segments

Natural Resources - Soil and Land - R
Published by OldLipe over 1 year ago

SITS - Version 1.4.2-1

Hotfix version 1.4.2-1

  • Fix crs bug in sits_apply()
  • Update file name in clean feature
  • Fix time series extraction bug with segments
  • Fix examples

Natural Resources - Soil and Land - R
Published by OldLipe over 1 year ago

SITS - Version 1.4.2

What's new in SITS version 1.4.2

  • Support for vector data cubes, including visualisation
  • Object-based time series analysis using spatio-temporal segmentation
  • Improved support for GPU usage when running deep learning algorithms
  • New function to clean values by modal filter in classified images
  • Added experimental support for Sentinel-1 images available on MPC
  • Summary function now includes cloud cover information
  • General bug fixes

Natural Resources - Soil and Land - R
Published by OldLipe over 1 year ago

SITS - Version 1.4.1

What's new in SITS version 1.4.1

  • Updated access to collections in Brazil Data Cube, HLS, and AWS
  • Corrected errors in labelling of classified cubes
  • Created a factory of functions for segmentation

Natural Resources - Soil and Land - R
Published by OldLipe almost 2 years ago

SITS - Version 1.4.0

What's new in SITS version 1.4.0

  • New function for image segementation based on supercells package
  • New version of sits_get_data() to extract average values of time series based on segments
  • Support for Harmonized Landsat Sentinel (HLS) collections from NASA
  • Support for probability cubes and uncertainty cubes in sits_view()
  • New summary() function to show details of data cubes and time series tibbles
  • General big fixes

Natural Resources - Soil and Land - R
Published by OldLipe almost 2 years ago

SITS - Version 1.3.0

What's new in SITS version 1.3.0

  • Remove NOTES and WARNINGS pointed out by CRAN
  • New sits_mosaic() function for improving visualization of large data sets
  • Add support to cubes with no cloud coverage information in sits_regularize()
  • Improve sits_cube_copy() for downloading data from the internet
  • Tested and validated GPU support for deep learning models in sits
  • Added multithread support for deep learning models in sits_train()
  • Improve sits_combine_predictions()
  • Remove dependencies on data.table package
  • Organize and clean internal APIs
  • General bug fixes

Natural Resources - Soil and Land - R
Published by rolfsimoes about 2 years ago

SITS - Version 1.2.0-4

Hotfix version 1.2.0-4

  • Fix issue #918

Natural Resources - Soil and Land - R
Published by rolfsimoes about 2 years ago

SITS - Version 1.2.0-3

Hotfix version 1.2.0-3

  • Fix stars proxy bug (issue #902)
  • Fix purrr cross deprecation
  • Fix ggplot2 aes_string deprecation

Natural Resources - Soil and Land - R
Published by rolfsimoes over 2 years ago

SITS - Version 1.2.0-1

Hotfix version 1.2.0-1

  • Fix sits_som_clean_samples() bug (issue #890)

Natural Resources - Soil and Land - R
Published by rolfsimoes over 2 years ago

SITS - Version 1.2.0

New features in SITS version 1.2.0

  • sits_get_data() can be used to retrieve samples in classified cube
  • Support for mixture models (sits_mixture_model())
  • Joining cubes in a mosaic (sits_mosaic_cubes())
  • Extract the trained ML model (sits_model())
  • Downloading and copying data cubes (sits_cube_copy())
  • Combine prediction by average and entropy (sits_combine_predictions())
  • Significant performance improvement when working with COG files
  • Allow plot of confusion matrix (sits_plot)
  • Support for operations on CLOUD band in sits_apply()
  • Bug fixes and internal re-engineering for better code maintenance

Natural Resources - Soil and Land - R
Published by rolfsimoes over 2 years ago

SITS - Version 1.1.0

What's changed in SITS version 1.1.0

  • Introduced support to kernel functions in sits_apply
  • Introduced new function sits_mixture_model for spectral mixture analysis
  • Support for the Swiss Data Cube (swissdatacube.org)
  • Support for mosaic visualization in sits_view
  • Introduced new function sits_as_sf to convert sits objects to sf
  • Export images as COG in sits_regularize
  • Add roi parameter in sits_regularize function
  • Add crs parameter in sits_get_data
  • Change Microsoft Planetary Computer source name to "MPC"
  • Fix several bugs and improve performance

Natural Resources - Soil and Land - R
Published by rolfsimoes almost 3 years ago

SITS - Version 1.0.0

Available on CRAN
Changes to match the package to CRAN standards
Update documentation

Natural Resources - Soil and Land - R
Published by rolfsimoes almost 3 years ago

SITS - Version 0.17.0

What's changed

  • Introduced new classifier model sits_lighttae() (Lightweight Temporal Self-Attention)
  • Introduced sits_uncertainty_sampling() for active learning
  • Introduced sits_confidence_samples() for semi-supervised learning
  • Introduced sits_geo_dist() to generate samples-samples and samples-predicted plot
  • Introduced sits_tuning() for random search of machine learning parameters
  • Introduced sits_reduce_imbalance() function to balance class samples
  • Introduced sits_as_sf() to convert a sits tibble to a sf object
  • Support to torchopt deep learning optimizer package
  • New types of sits_uncertainty(): least confidence and margin of confidence
  • Implement parallel processing for sits_kfold_validate()
  • Change data to samples in sits machine learning classifiers (NOTE: models trained in previous versions is no longer supported)
  • Change deep learning functions to snake case
  • Remove file parameter in sits_get_data() function
  • Update documentation
  • Improve several internal functions performances
  • Fix several bugs

Natural Resources - Soil and Land - R
Published by rolfsimoes almost 3 years ago

SITS - Version 0.16.3

What's changed

  • reimplemented all deep learning functions using torch package and remove keras dependence
  • Introduced sits_TAE() classification model
  • Introduced sits_lightgbm() classification model
  • Simplified sits_regularize() parameters
  • Improve sits_regularize() to reach production level quality
  • Improve sits_regularize() to use C++ internal functions
  • Include improved version of gdalcubes
  • Improve sits_cube() to open results cube
  • Update plot() parameters on raster cubes
  • Support multi-tile for classified cube in sits_view()

Natural Resources - Soil and Land - R
Published by rolfsimoes about 3 years ago

SITS - Version 0.16.2

What's Changed

  • Improve sits_get_data() to accept tibbles
  • Remove multiples progress bar from sits_cube()
  • Improve sits_regularize() to process in parallel by tiles, bands, and dates
  • Improve sits_regularize() to check malformed files

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.16.1

What's Changed

  • fix AWS environment variables
  • add resume feature and fault tolerance in sits_apply() function

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.16.0-1

What's Changed

  • hotfix sits_cube() function to tolerate malformed paths from STAC service;

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.16.0

What's Changed

  • Include sits_apply() function to generate new bands from existing ones;
  • Improve sits_accuracy() function to work with multiple cubes;
  • Add band parameter to sits_view()
  • Introduce sits_uncertainty() function to provide uncertainty measure to probability maps;
  • Improve sits_regularize() by taking least cloud cover by default method to compose images
  • Bug fixes;

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.1-1

What's Changed

Full Changelog: https://github.com/e-sensing/sits/compare/v0.15.1...v0.15.1-1

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.1

What's Changed

Full Changelog: https://github.com/e-sensing/sits/compare/v0.15.0...v0.15.1

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.0-4

What's Changed

Full Changelog: https://github.com/e-sensing/sits/compare/v0.15.0-2...v0.15.0-4

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.0-3

What's Changed

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.0-2

  • Fix bug that does not allow users inform HTTP headers to access private collections by @rolfsimoes in #446
  • Update drone version by @OldLipe in #444

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.15.0-1

What's Changed

Full Changelog: https://github.com/e-sensing/sits/compare/v0.14.1-1...v0.15.0-1

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.15.0

  • Support for regularization of collections in DEAFRICA and USGS improvement
  • Collection S2_10_16D_STK-1 removed from BDC source in config file
  • Add a color for NoClass label improvement
  • Change mapview to leaflet package
  • Standardize cube creation parameters
  • Remove CLASSIFIED and PROBS sources from config file
  • Change minimal version requirement of terra package to 1.4-11
  • Update sits_list_collections() to indicate open data collection
  • Geographical visualization of samples
  • Remove dependencies on packages ptw, signal and MASS
  • Add support to open_data collections in config file
  • Change default output_dir parameter
  • Remove sits_cube_clone() function
  • Plot RGB images from raster cubes
  • Fixed error in sits_select() for bands in raster cube
  • Update examples in demo
  • Support open data collections of DEAFRICA and AWS
  • Support USGS STAC Landsat 8 catalog
  • User can provide resampling method to sits_regularize() function
  • Add support to open data collections on 'AWS' source
  • Remove OPENDATA source
  • Update documentation
  • Resolve ambiguity in "bands" parameter for data cubes
  • Remove "sits_bands" assignment function
  • Include "labels" information only on probs and labelled data cubes
  • Remove S2_10-1 BDC collection from config
  • Other bug fixes

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.14.1-1

  • Fix cube generated by sits_regularize(): cannot have "CLOUD" band

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.14.1

  • Implement new function sits_list_collections()
  • Update gdalcubes parameters
  • Implement .source_bands_resampling()
  • Remove name from demo file
  • Improve sits_som_clean_samples() function
  • Improve sits_bands<-() function
  • Improve sits_select() function
  • Error in cloud band of CBERS4 data example
  • Include a function to list collections available in cloud services
  • sits_cube_copy() does not include information on the tile
  • Get spatial resolution from config file
  • Fix partial merge configuration file
  • Change bbox to roi in sits

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.14.0-2

  • Fix sits_bbox() function

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.14.0-1

  • Fix duplicate link in AWS STAC

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.14.0

  • Now the plot of a classified cube requires a legend or a palette if the labels are not in the default sits palette.
  • Support for S2-SEN2COR_10_16D_STK-1 BDC collection
  • Remove function name from msg in check function
  • Add satellite and sensor info in config file
  • Remove imager, ranger, proto, and future packages from sits
  • Support for different providers to LOCAL sources
  • LOCAL source is dynamically built
  • Remove sits_cube.local_cube() function parameters satellite and sensor
  • Add parameters origin and collection to sits_cube.local_cube() function
  • Fix LOCAL source examples and tests
  • Add progress bar to sits_classification()

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.13.1

  • Update and add more tests in CI
  • Implement new check functions
  • Change error and warning messages
  • fix deprecated warnings in keras package
  • bug fixes

See more in NEWS.md

Natural Resources - Soil and Land - R
Published by rolfsimoes over 3 years ago

SITS - Version 0.13.0-3

  • Update documentation in Machine Learning methods
  • Hotfix bug in neuron labelling

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.13.0-2

  • Bug fixes in BDC MODIS cube

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.13.0-1

  • Bug fixes in check STAC bands
  • Change Landsat-8 (LC8_30-1) product metadata for BDC source

Natural Resources - Soil and Land - R
Published by OldLipe over 3 years ago

SITS - Version 0.13.0

  • Create API for source cube
  • Update auxiliary functions of the config file
  • Update config file
  • Add support to others bands values in config file
  • Add support to bit mask in USGS cube
  • Support to multiples directories in local cubes
  • Support for MODIS cloud bands
  • Dealing with invalid areas in SITS
  • Support for WTSS

See more in NEWS.md

Natural Resources - Soil and Land - R
Published by rolfsimoes almost 4 years ago

SITS - Version 0.12.0

  • Bugs fixed
  • Documentation updated
  • Support for multiple tile in local cubes
  • Improve selection using roi parameter in sits_classify() function

Natural Resources - Soil and Land - R
Published by rolfsimoes almost 4 years ago

SITS - Version 0.11.1

  • bands in local cube are now case insensitive
  • LSTM+FCN ML method was removed

Natural Resources - Soil and Land - R
Published by rolfsimoes about 4 years ago

SITS - Version 0.11.0

  • Fix of ML methods using Keras
  • Change parallel processing
  • Introduces 'resume' classification feature
  • Some improvements
  • Several bug fixes

Natural Resources - Soil and Land - R
Published by rolfsimoes about 4 years ago

SITS - Version 0.10.0

For more information on this release, please, read the NEWS.md file.

Natural Resources - Soil and Land - R
Published by rolfsimoes about 4 years ago

SITS - Version 0.9.8

For more information on this release, please, read the CHANGES.rst file.

Natural Resources - Soil and Land - R
Published by gqueiroz over 4 years ago