Contributors: Carl Boettiger

Name: Carl Boettiger
Login: cboettig
Email: cboettig@gmail.com
Website: http://carlboettiger.info
Company: UC Berkeley
Repositories count: 173
Last synced at: 2024-06-11T15:35:21.626Z
Total stars: 1022
Followers: 905
Following: 92
OST Projects: 8
Languages: R, Jupyter Notebook
Categories: Biosphere, Climate Change, Sustainable Development
Sub Categories: Biodiversity Data Access and Management, Biodiversity and Species Distribution, Climate Data Access and Visualization, Data Catalogs and Interfaces, Education, Marine Life and Fishery, Taxonomy and Ontology
Topics: biodiversity, biology, darwincore, nomenclature, taxize, taxonomy, daily-data, daily-weather, data-access, global-data, gsod, historical-data, historical-weather, ncdc, ncei, weather, weather-data, weather-information, weather-stations, fisheries, openfisheries, fish, fishbase, ecology, neon-data, provenance, conservation, rl, research-compendium, stochasticity, decisions, archiving, dbi, codemeta, json-ld, data-store, git-lfs, eml, eml-metadata, unconf, unconf17, decision-theory, stac, open-science, osf, deep-reinforcement-learning, gym, hyperparameter-optimization, hyperparameter-search, hyperparameter-tuning, lab, pybullet, pybullet-environments, sde, stable-baselines, tuning-hyperparameters, darwin-core, gbif, binder, itis, taxonomic-databases, embedded, examples, littler, repository-tools, curl, literate-programming, pandoc, rmarkdown, fwf, parsing

Contributed Projects

rdataone

R package for reading and writing data at DataONE data repositories.

Sustainable Development - Data Catalogs and Interfaces - Last synced: 01 Jun 2026 - Ranking: 20.2

rfishbase

An R interface to the fishbase.org database.

fish fishbase r r-package rstats taxonomy

Biosphere - Marine Life and Fishery - Last synced: 01 Jun 2026 - Ranking: 19.3

taxizedb

Automatically converts supported taxonomic databases into SQLite for unified querying, with support for the National Center for Biotechnology Information Taxonomy, the Integrated Taxonomic Information System, World Flora Online, the Catalogue of Life, the Global Biodiversity Information Facility, and Wikidata.

itis r r-package rstats taxize taxonomic-databases taxonomy

Sustainable Development - Taxonomy and Ontology - Last synced: 31 May 2026 - Ranking: 17.8

rfisheries

Interacting with fisheries databases at openfisheries.org.

fisheries open-data openfisheries r r-package rstats

Biosphere - Marine Life and Fishery - Last synced: 31 May 2026 - Ranking: 16.7

taxize

Allows users to search over many taxonomic data sources for species names (scientific and common) and download up and downstream taxonomic hierarchical information.

api api-wrapper biodiversity biology darwincore data nomenclature r r-package rstats taxize taxonomy

Biosphere - Biodiversity Data Access and Management - Last synced: 01 Jun 2026 - Ranking: 11.0

gbifdb

Provide a relational database interface to a parquet based serializations of gbif's AWS snapshots of its public data.

Biosphere - Biodiversity Data Access and Management - Last synced: 01 Jun 2026 - Ranking: 10.3

Earthdata Cloud Cookbook

This Cookbook is learning-oriented to support scientific researchers using NASA Earthdata from Distributed Active Archive Centers as they migrate their workflows to the cloud.

Sustainable Development - Education - Last synced: 31 May 2026 - Ranking: 9.0

GSODR

Global Surface Summary of the Day Weather Data Client for R.

daily-data daily-weather data-access global-data gsod historical-data historical-weather ncdc ncei r r-package rstats weather weather-data weather-information weather-stations

Climate Change - Climate Data Access and Visualization - Last synced: 31 May 2026 - Ranking: -Infinity