Contributors: Rekyt
Name: Rekyt
Login: Rekyt
Email: matthias.grenie@ens-lyon.fr
Description: Assistant Professor of Biostatistics & Ecology
Website: http://rekyt.github.io/
Location: Grenoble, France
Company: Université Grenoble Alpes / Laboratoire d'Écologie Alpine (LECA)
Repositories count: 61
Last synced at: 2024-06-11T15:35:20.816Z
Total stars: 44
Followers: 86
Following: 196
OST Projects: 26
Languages: R, HTML
Categories: Biosphere, Natural Resources, Sustainable Development
Sub Categories: Biodiversity Analysis and Metrics, Biodiversity Data Access and Management, Biodiversity and Species Distribution, Education, Plants and Vegetation, Soil and Land, Species Distribution Modeling, Taxonomy and Ontology
Topics: biodiversity, biology, darwincore, nomenclature, taxize, taxonomy, landscape-ecology, landscape-metrics, bien, botanical, ecology, open-science, phylogeny, plant, range-maps, traits, diversity, entropy-partitioning, estimator, measure, species, neutral-landscape-model, conservation, conservation-prioritization, evolution, software, carpentries, data-carpentry, data-wrangling, english, lesson, stable, harmonization, trait-datasets, ecological-models, rarity, biodiversity-data, functional-diversity, functional-trait, practical-sessions, biodiversity-indicators, biodiversity-informatics, functional-ecology, functional-traits, trait, trait-based, exploratory-data-analysis, missingness, ropensci, visualisation, sherpa-romeo, functional-biogeography, sdm, species-distribution-modelling, ssdm, tidy-data, beta, carpentries-incubator, tidyverse, plants-database, plants-distribution, hill-numbers, itis, taxonomic-databases, data-cleaning, taxon, bioinformatics, phylogenetics, asynchronous, distributed-computing, futures, hpc-clusters, parallel-computing, parallel-processing, parallelization, promises, decay, thermogravimetry
Contributed Projects
ade4
Analysis of Ecological Data for Exploratory and Euclidean Methods in Environmental Sciences.
Biosphere - Biodiversity Analysis and Metrics - Last synced: 12 May 2026 - Ranking: 19.2
biomod2
A computer platform for ensemble forecasting of species distributions, enabling the treatment of a range of methodological uncertainties in models and the examination of species-environment relationships.
Biosphere - Species Distribution Modeling - Last synced: 12 May 2026 - Ranking: 18.4
taxizedb
Automatically converts supported taxonomic databases into SQLite for unified querying, with support for the National Center for Biotechnology Information Taxonomy, the Integrated Taxonomic Information System, World Flora Online, the Catalogue of Life, the Global Biodiversity Information Facility, and Wikidata.
itis r r-package rstats taxize taxonomic-databases taxonomy
Sustainable Development - Taxonomy and Ontology - Last synced: 12 May 2026 - Ranking: 17.8
landscapemetrics
Landscape Metrics for Categorical Map Patterns in R.
landscape-ecology landscape-metrics r raster spatial
Natural Resources - Soil and Land - Last synced: 12 May 2026 - Ranking: 16.3
entropart
An R package that provides functions to calculate alpha, beta and gamma diversity of communities, including phylogenetic and functional diversity.
biodiversity diversity entropy-partitioning estimator measure species
Biosphere - Biodiversity Analysis and Metrics - Last synced: 12 May 2026 - Ranking: 14.0
SSDM
A package to map species richness and endemism based on stacked species distribution models.
Biosphere - Species Distribution Modeling - Last synced: 12 May 2026 - Ranking: 12.8
fundiversity
Provides a lightweight package to compute common functional diversity indices.
biodiversity biodiversity-indicators biodiversity-informatics functional-diversity functional-ecology functional-trait functional-traits r r-package trait trait-based traits
Biosphere - Biodiversity Analysis and Metrics - Last synced: 12 May 2026 - Ranking: 11.7
R-ecology-lesson
Data Analysis and Visualization in R for Ecologists.
carpentries data-carpentry data-visualisation data-visualization data-wrangling ecology english lesson open-educational-resources r stable
Sustainable Development - Education - Last synced: 12 May 2026 - Ranking: 11.3
mFD
Provides a user friendly interface to compute a global assessment of functional diversity by gathering computation of alpha and beta functional indices.
Biosphere - Biodiversity Analysis and Metrics - Last synced: 12 May 2026 - Ranking: 11.2
taxize
Allows users to search over many taxonomic data sources for species names (scientific and common) and download up and downstream taxonomic hierarchical information.
api api-wrapper biodiversity biology darwincore data nomenclature r r-package rstats taxize taxonomy
Biosphere - Biodiversity Data Access and Management - Last synced: 12 May 2026 - Ranking: 11.0
NLMR
R package to simulate neutral landscape models.
landscape-ecology neutral-landscape-model peer-reviewed r r-package rstats spatial
Natural Resources - Soil and Land - Last synced: 12 May 2026 - Ranking: 7.2
IUCNN
Environmental data and existing IUCN Red List assessments to predict the conservation status of 'Not Evaluated' species, for any taxon or geographic region of interest.
conservation conservation-prioritization deep-learning machine-learning tensorflow
Biosphere - Biodiversity Data Access and Management - Last synced: 12 May 2026 - Ranking: 5.7
RBIEN
Tools for accessing the Botanical Information and Ecology Network database.
bien biodiversity botanical ecology open-science phylogeny plant r range-maps traits
Biosphere - Plants and Vegetation - Last synced: 12 May 2026 - Ranking: 5.5
