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Resources","sub_category":"Soil and Land","monthly_downloads":352,"total_dependent_repos":0,"total_dependent_packages":0,"readme":"---\noutput: github_document\n---\n\n\u003c!-- README.md is generated from README.Rmd. Please edit that file --\u003e\n\n```{r, include = FALSE}\nknitr::opts_chunk$set(\n  collapse = TRUE,\n  comment = \"#\u003e\",\n  fig.path = \"man/figures/README-\",\n  out.width = \"100%\",\n  echo = TRUE,\n  warning = FALSE,\n  message = FALSE\n)\n```\n\n\n\u003cp id=\"start\" align=\"center\"\u003e\n\u003ca href=\"#start\"\u003e\u003cimg height=\"300rem\" src=\"man/figures/logo.png\"\u003e\u003c/a\u003e\n\u003c/p\u003e\n\n\u003cdiv align=\"center\"\u003e\n\n\u003ca href=\"https://github.com/RobelTakele/AquaBEHER/issues/new?labels=bug\u0026projects=\u0026template=01_BUG-REPORT.yml\u0026title=%5BBUG%5D+%3Ctitle%3E\" style=\"font-size: 20px;\"\u003eReport a Bug\u003c/a\u003e \u0026nbsp;\u0026nbsp;\u0026nbsp;|\u0026nbsp;\u0026nbsp;\u0026nbsp;\n\u003ca href=\"https://github.com/RobelTakele/AquaBEHER/discussions/new?category=ideas\" style=\"font-size: 20px;\"\u003eRequest a Feature\u003c/a\u003e \u0026nbsp;\u0026nbsp;\u0026nbsp;|\u0026nbsp;\u0026nbsp;\u0026nbsp;\n\u003ca href=\"https://github.com/RobelTakele/AquaBEHER/discussions/new/choose\" style=\"font-size: 20px;\"\u003eAsk a Question\u003c/a\u003e\n\n\u003c!-- badges: start --\u003e\n\u003ca href=\"https://github.com/RobelTakele/AquaBEHER\"\u003e\u003cimg src=\"https://img.shields.io/github/v/release/RobelTakele/AquaBEHER\" alt=\"GitHub release\" height=\"25\"\u003e\n\u003c/a\u003e\n\u003ca href=\"https://github.com/RobelTakele/AquaBEHER/actions/workflows/R-CMD-check.yaml\"\u003e\n  \u003cimg src=\"https://github.com/RobelTakele/AquaBEHER/actions/workflows/R-CMD-check.yaml/badge.svg\" alt=\"R-CMD-check\" height=\"25\"\u003e\n\u003c/a\u003e\n\u003ca href=\"https://lifecycle.r-lib.org/articles/stages.html#stable\"\u003e\n  \u003cimg src=\"https://img.shields.io/badge/lifecycle-stable-brightgreen.svg\" alt=\"Lifecycle: stable\" height=\"25\"\u003e\n\u003c/a\u003e\n\u003ca href=\"https://www.gnu.org/licenses/gpl-3.0.en.html\"\u003e\n  \u003cimg src=\"https://img.shields.io/badge/license-GPL--3-blue.svg\" alt=\"license\" height=\"25\"\u003e\n\u003c/a\u003e\n\u003ca href=\"https://www.gnu.org/licenses/gpl-3.0.en.html\"\u003e\n  \u003cimg src=\"https://cranlogs.r-pkg.org/badges/AquaBEHER\" alt=\"metacran downloads\" height=\"25\"\u003e\n\u003c/a\u003e\n\u003c!-- badges: end --\u003e\n\n\u003c/div\u003e\n\n\u003cp id=\"line\" align=\"center\"\u003e\n\u003ca href=\"#line\"\u003e\u003cimg height=\"10rem\" src=\"man/figures/aqua.png\"\u003e\u003c/a\u003e\n\u003c/p\u003e\n\n**Estimates** and **predicts** the wet season calendar (WSC) and soil water balance for agricultural applications. It integrates daily potential evapotranspiration (PET) and soil water balance parameters to compute the WSC for crop and soil water management. Using these parameters, `AquaBEHER` can estimate and predict the onset, cessation, and duration of the wet season based on an agroclimatic approach.\n\n### ⛓ Key Features\n- **Daily potential evapotranspiration (PET)** estimation using various methods.\n- **Daily soil water balance** estimation based on adjustable soil water holding capacity (soilWHC).\n- **Wet season calendar** estimation and seasonal prediction including:\n    - Onset of the wet season\n    - Cessation of the wet season\n    - Duration of the wet season\n\n`AquaBEHER` is designed to facilitate water-efficient agricultural practices in response to climate variability and change.\n\n---\n\n## :arrow_down: Installation\n\n### Install from CRAN:\n```r\ninstall.packages(\"AquaBEHER\")\n```\n\n### Install the development version from GitHub:\n```r\n# install.packages(\"devtools\")\ndevtools::install_github(\"RobelTakele/AquaBEHER\")\n```\nTo view the vignettes in RStudio, run:\n```r\nvignette(\"AquaBEHER\", \"AquaBEHER\")\n```\nFurther details regarding `AquaBEHER` are available on the package website, visit [here](https://robeltakele.github.io/AquaBEHER/).\n\n---\n\n## :fast_forward: Quick Example\n\nHere's a quick example to estimate daily soil water balance:\n\n```{r example, message=FALSE}\nlibrary(AquaBEHER)\ndata(AgroClimateData)\n\n# Estimate PET using Penman-Monteith method\nPET \u003c- calcEto(AgroClimateData, method = \"PM\", Zh = 10)\n\n# Add PET to the dataset\nAgroClimateData$Eto \u003c- PET$ET.Daily\n\n# Estimate daily soil water balance for a soil with 100mm water holding capacity\nwatBal.list \u003c- calcWatBal(data = AgroClimateData, soilWHC = 100)\nwatBal \u003c- watBal.list$data\nhead(watBal)\n```\n\n---\n\n## :bar_chart: Visualization\n\nVisualize the daily soil water balance, rainfall, and potential evapotranspiration (Eto) for the climatological year 2019–2020:\n\n```{r watBalPlot, fig.height=6, fig.width=8, fig.dpi=400}\nlibrary(ggplot2)\n\n# Filter the data for 2019 and 2020\nwatBal.19T20 \u003c- watBal[watBal$Year %in% c(2019, 2020), ]\ndate.vec \u003c- as.Date(paste(watBal.19T20$Year, watBal.19T20$Month, watBal.19T20$Day, sep = \"-\"), format = \"%Y-%m-%d\")\nwatBal.19T20$date \u003c- date.vec\n\n# Plot water balance with ggplot2\nggplot(watBal.19T20, aes(x = date)) +\n  geom_bar(aes(y = Rain), stat = \"identity\", fill = \"#1f78b4\", alpha = 0.6, width = 0.8) +\n  geom_line(aes(y = AVAIL), color = \"#33a02c\", size = 1.5) +\n  geom_line(aes(y = Eto), color = \"#ff7f00\", size = 1.2, linetype = \"dashed\") +\n  scale_x_date(date_labels = \"%b %Y\", date_breaks = \"1 month\", expand = c(0.01, 0)) +\n  scale_y_continuous(\n    name = \"Available Soil Water (mm)\",\n    sec.axis = sec_axis(~., name = \"Rainfall (mm)\")\n  ) +\n  labs(\n    title = \"Rainfall, Available Soil Water, and Potential Evapotranspiration\",\n    subtitle = \"2019-2020 Data\",\n    x = NULL, y = NULL\n  ) +\n  theme_minimal(base_size = 15) +\n  theme(\n    plot.title = element_text(face = \"bold\", size = 18, hjust = 0.5),\n    plot.subtitle = element_text(size = 14, hjust = 0.5, color = \"grey40\"),\n    axis.text.x = element_text(angle = 45, hjust = 1),\n    panel.grid.minor = element_blank(),\n    panel.grid.major = element_line(linetype = \"dotted\", color = \"grey80\")\n  )\n```\n\n## :memo: Citation\n\nIf you used `AquaBEHER` in your work, please cite it. You can view the most recent citation by running:\n```r\ncitation(package = \"AquaBEHER\")\n```\n\n```\nTo cite `AquaBEHER` in publications, please use:\n\n  Robel Takele, Matteo Dell'Acqua (2023). `AquaBEHER`: Estimation and Prediction of Wet Season Calendar and Soil\n  Water Balance for Agriculture. R package version 1.0.0. Available at\n  https://cran.r-project.org/web/packages/AquaBEHER\n\nA BibTeX entry for LaTeX users is:\n\n  @Manual{,\n    title = {`AquaBEHER`: Estimation and Prediction of Wet Season Calendar and Soil Water Balance for Agriculture},\n    author = {Robel Takele and Matteo Dell'Acqua},\n    year = {2023},\n    note = {R package version 1.0.0},\n    url = {https://robeltakele.github.io/AquaBEHER/},\n  }\n```\n## :earth_africa: Feedback and Contributions 🤝 \n\nWe appreciate feedback and contributions to improve `AquaBEHER`. Feel free to report bugs, suggest features, or join discussions.\n\nYour contributions make a difference!\n\n\u003e [!IMPORTANT]\n\u003e Submit issues [here](https://github.com/RobelTakele/AquaBEHER/issues/) or join discussions [here](https://github.com/RobelTakele/AquaBEHER/discussions).\n\n ✤ \u003ci\u003eWe appreciate your support and look forward to making our package even better with your help!\u003c/i\u003e\n\n---\n\n## :mailbox_with_mail: Contact Us\n\n\u003cimg align=\"right\" width=\"300\" src=\"http://www.capitalisegenetics.santannapisa.it/sites/default/files/u65/Logo%20plant%20sciences.png\"\u003e\n\nThe **Genetics Group** at the *Institute of Plant Sciences* is a culturally diverse, research-driven team focused on advancing agricultural innovation. We combine crop genetics, climate science, and participatory strategies to develop sustainable farming solutions.\n\nWe are based at **Scuola Superiore Sant'Anna**, Pisa, Italy.\n\nFor inquiries, please reach out to:\n- [Matteo Dell'Acqua](mailto:m.dellacqua@santannapisa.it)\n- [Mario Enrico Pè](mailto:m.pe@santannapisa.it)\n\nLearn more about our work on the [institute web page](https://www.santannapisa.it/en/institute/plant-sciences).\n\n\u003cdiv align=\"center\"\u003e\n  \u003ca href=\"https://twitter.com/intent/tweet?text=Check%20out%20this%20project%20on%20GitHub:%20https://github.com/RobelTakele/AquaBEHER\"\u003e\n    \u003cimg src=\"https://img.shields.io/badge/share-000000?logo=x\u0026logoColor=white\" alt=\"Share on X\"\u003e\n  \u003c/a\u003e\n  \u003ca href=\"https://www.linkedin.com/sharing/share-offsite/?url=https://github.com/RobelTakele/AquaBEHER\"\u003e\n    \u003cimg src=\"https://img.shields.io/badge/share-0A66C2?logo=linkedin\u0026logoColor=white\" alt=\"Share on LinkedIn\"\u003e\n  \u003c/a\u003e\n  \u003ca href=\"https://www.facebook.com/sharer/sharer.php?u=https://github.com/RobelTakele/AquaBEHER\"\u003e\n    \u003cimg src=\"https://img.shields.io/badge/share-1877F2?logo=facebook\u0026logoColor=white\" alt=\"Share on Facebook\"\u003e\n  \u003c/a\u003e\n  \u003ca href=\"https://www.reddit.com/submit?title=Check%20out%20this%20project%20on%20GitHub:%20https://github.com/RobelTakele/AquaBEHER\"\u003e\n    \u003cimg src=\"https://img.shields.io/badge/share-FF4500?logo=reddit\u0026logoColor=white\" alt=\"Share on Reddit\"\u003e\n  \u003c/a\u003e\n\u003c/div\u003e\n\n\n\n## :link: Resources\n\n- [`AquaBEHER` Documentation](https://CRAN.R-project.org/package=AquaBEHER)\n- [`AquaBEHER` GitHub Repository](https://github.com/RobelTakele/AquaBEHER)\n- [Scuola Superiore Sant'Anna](https://www.santannapisa.it/en/institute/plant-sciences)\n\n---\n\n## 🌟 Show Your Support\n\nIf you find **`AquaBEHER`** helpful or interesting, please consider giving us a star on GitHub. Your support helps promote the project and lets others know it's worth checking out.\n\n🙏 Thank you for your support! 👍\n\n[![Star this project](https://img.shields.io/github/stars/RobelTakele/AquaBEHER?style=social)](https://github.com/RobelTakele/AquaBEHER/stargazers)\n\n---\n\n## 👥 Contributors\n\n\u003cdiv\u003e\n  \u003cp\u003e\n    👨‍💻 \u003cb\u003eRobel Takele\u003c/b\u003e\u003cbr\u003e\n    \u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp; Email: \u003ca href=\"mailto:takelerobel@gmail.com\"\u003etakelerobel@gmail.com\u003c/a\u003e\u003cbr\u003e\n    \u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp; GitHub: \u003ca href=\"https://github.com/RobelTakele\"\u003e@RobelTakele\u003c/a\u003e\n  \u003c/p\u003e\n\n  \u003cp\u003e\n    👨‍💻 \u003cb\u003eMatteo Dell'Acqua\u003c/b\u003e\u003cbr\u003e\n    \u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp; Email: \u003ca href=\"mailto:m.dellacqua@santannapisa.it\"\u003em.dellacqua@santannapisa.it\u003c/a\u003e\u003cbr\u003e\n    \u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp;\u0026nbsp; GitHub: \u003ca href=\"https://github.com/mdellh2o\"\u003e@MatteoDellAcqua\u003c/a\u003e\n  \u003c/p\u003e\n\u003c/div\u003e\n\n\n### 🄯 License\n\nThis project is licensed under the GNU General Public License, [GPL-3](https://cran.r-project.org/web/licenses/GPL-3).\n\n\u003cp align=\"right\"\u003e \u003ca href=\"#start\"\u003e\u003cbutton style=\"padding:10px 30px; background-color:#0096FF; color:white; border:none; border-radius:5px; cursor:pointer;\"\u003eBack to Top\u003c/button\u003e\u003c/a\u003e \u003c/p\u003e\n\n\n","funding_links":[],"readme_doi_urls":[],"works":{},"citation_counts":{},"total_citations":0,"keywords_from_contributors":[],"project_url":"https://ost.ecosyste.ms/api/v1/projects/47805","html_url":"https://ost.ecosyste.ms/projects/47805"}