{"id":46166,"name":"PoPS","description":"This is the R package for simulating spread of pests and pathogens.","url":"https://github.com/ncsu-landscape-dynamics/rpops","last_synced_at":"2026-04-12T01:30:23.242Z","repository":{"id":38081396,"uuid":"143435350","full_name":"ncsu-landscape-dynamics/rpops","owner":"ncsu-landscape-dynamics","description":"PoPS (Pest or Pathogen Spread) R Package","archived":false,"fork":false,"pushed_at":"2026-02-24T17:42:08.000Z","size":77370,"stargazers_count":12,"open_issues_count":12,"forks_count":6,"subscribers_count":8,"default_branch":"main","last_synced_at":"2026-04-06T23:02:50.760Z","etag":null,"topics":["insect","modeling","pathogen","pathogen-spread","pest","pests","pops","simulation"],"latest_commit_sha":null,"homepage":"https://ncsu-landscape-dynamics.github.io/rpops/","language":"C++","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ncsu-landscape-dynamics.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-08-03T14:10:34.000Z","updated_at":"2026-01-15T13:57:12.000Z","dependencies_parsed_at":"2023-09-21T19:59:01.669Z","dependency_job_id":"b9125b46-c1dc-4a13-8757-7a488cb50adb","html_url":"https://github.com/ncsu-landscape-dynamics/rpops","commit_stats":{"total_commits":486,"total_committers":8,"mean_commits":60.75,"dds":0.05555555555555558,"last_synced_commit":"38a19e30320d4195697fd295464717cb8f33de6e"},"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":31579058,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-04-08T14:31:17.711Z","status":"ssl_error","status_checked_at":"2026-04-08T14:31:17.202Z","response_time":54,"last_error":"SSL_connect returned=1 errno=0 peeraddr=140.82.121.5:443 state=error: unexpected eof while reading","robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":false,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"}},"owner":{"login":"ncsu-landscape-dynamics","name":"NCSU Landscape Dynamics Group","uuid":"10871336","kind":"organization","description":"","email":null,"website":"http://geospatial.ncsu.edu/landscapedynamics/","location":"Raleigh, NC, USA","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/10871336?v=4","repositories_count":21,"last_synced_at":"2023-02-28T03:15:27.104Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/ncsu-landscape-dynamics","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-11T08:10:46.432Z","updated_at":"2023-02-28T03:15:27.114Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics/repositories"},"packages":[{"id":11733281,"name":"github.com/ncsu-landscape-dynamics/rpops","ecosystem":"go","description":null,"homepage":null,"licenses":"gpl-3.0","normalized_licenses":["GPL-3.0"],"repository_url":"https://github.com/ncsu-landscape-dynamics/rpops","keywords_array":[],"namespace":null,"versions_count":4,"first_release_published_at":"2020-09-16T01:43:41.000Z","latest_release_published_at":"2022-11-11T15:00:21.000Z","latest_release_number":"v2.0.1+incompatible","last_synced_at":"2026-04-06T23:01:56.115Z","created_at":"2025-06-05T11:15:08.781Z","updated_at":"2026-04-06T23:01:56.115Z","registry_url":"https://pkg.go.dev/github.com/ncsu-landscape-dynamics/rpops","install_command":"go get github.com/ncsu-landscape-dynamics/rpops","documentation_url":"https://pkg.go.dev/github.com/ncsu-landscape-dynamics/rpops#section-documentation","metadata":{},"repo_metadata":{"id":38081396,"uuid":"143435350","full_name":"ncsu-landscape-dynamics/rpops","owner":"ncsu-landscape-dynamics","description":"PoPS (Pest or Pathogen Spread) R Package","archived":false,"fork":false,"pushed_at":"2025-10-02T14:47:35.000Z","size":64804,"stargazers_count":11,"open_issues_count":12,"forks_count":5,"subscribers_count":8,"default_branch":"main","last_synced_at":"2025-10-08T21:07:15.925Z","etag":null,"topics":["insect","modeling","pathogen","pathogen-spread","pest","pests","pops","simulation"],"latest_commit_sha":null,"homepage":"https://ncsu-landscape-dynamics.github.io/rpops/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"gpl-3.0","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/ncsu-landscape-dynamics.png","metadata":{"files":{"readme":"README.md","changelog":"CHANGELOG.md","contributing":"CONTRIBUTING.md","funding":null,"license":"LICENSE","code_of_conduct":"CODE_OF_CONDUCT.md","threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"dco":null,"cla":null}},"created_at":"2018-08-03T14:10:34.000Z","updated_at":"2025-09-09T09:35:24.000Z","dependencies_parsed_at":"2023-09-21T19:59:01.669Z","dependency_job_id":"c27932e4-acc5-42a4-9fab-d5742844588a","html_url":"https://github.com/ncsu-landscape-dynamics/rpops","commit_stats":{"total_commits":486,"total_committers":8,"mean_commits":60.75,"dds":0.05555555555555558,"last_synced_commit":"38a19e30320d4195697fd295464717cb8f33de6e"},"previous_names":[],"tags_count":6,"template":false,"template_full_name":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/refs/heads/main","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":279073260,"owners_count":26097365,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2022-07-04T15:15:14.044Z","status":"online","status_checked_at":"2025-10-15T02:00:07.814Z","response_time":56,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"ncsu-landscape-dynamics","name":"NCSU Landscape Dynamics Group","uuid":"10871336","kind":"organization","description":"","email":null,"website":"http://geospatial.ncsu.edu/landscapedynamics/","location":"Raleigh, NC, USA","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/10871336?v=4","repositories_count":21,"last_synced_at":"2023-02-28T03:15:27.104Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/ncsu-landscape-dynamics","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-11T08:10:46.432Z","updated_at":"2023-02-28T03:15:27.114Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/ncsu-landscape-dynamics/repositories"},"tags":[{"name":"v2.0.1","sha":"3aee60b2a88435650b0ee7235698672db46726ba","kind":"commit","published_at":"2022-11-11T15:00:21.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/v2.0.1","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/v2.0.1","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@v2.0.1","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v2.0.1","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v2.0.1/manifests"},{"name":"v2.0.0","sha":"fb6105c91673838c235aaaf638950ef4e8a65c80","kind":"commit","published_at":"2021-12-08T21:03:48.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/v2.0.0","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/v2.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@v2.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v2.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v2.0.0/manifests"},{"name":"1.1.0","sha":"b316d40cd1757c3cd8e00841344c3bfd08f41678","kind":"commit","published_at":"2021-06-22T20:12:22.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/1.1.0","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/1.1.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@1.1.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/1.1.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/1.1.0/manifests"},{"name":"v1.0.2","sha":"ec41f5bf0f5ed88b0d74758a782b478102b92f98","kind":"commit","published_at":"2020-10-09T14:30:07.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/v1.0.2","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/v1.0.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@v1.0.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v1.0.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v1.0.2/manifests"},{"name":"v1.0.0","sha":"51e3818b3205beeafef5d5acf413ad7346e39619","kind":"commit","published_at":"2020-09-16T01:43:41.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/v1.0.0","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/v1.0.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@v1.0.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v1.0.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/v1.0.0/manifests"},{"name":"0.1.0-beta","sha":"f4f8efeeb6944cf5d628e7310b5b9a5b6c0fb361","kind":"commit","published_at":"2020-01-07T20:55:36.000Z","download_url":"https://codeload.github.com/ncsu-landscape-dynamics/rpops/tar.gz/0.1.0-beta","html_url":"https://github.com/ncsu-landscape-dynamics/rpops/releases/tag/0.1.0-beta","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/ncsu-landscape-dynamics/rpops@0.1.0-beta","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/0.1.0-beta","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/tags/0.1.0-beta/manifests"}]},"repo_metadata_updated_at":"2025-10-17T17:14:45.610Z","dependent_packages_count":0,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":5.757538697138725,"dependent_packages_count":5.395053785167736,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":5.57629624115323},"purl":"pkg:golang/github.com/ncsu-landscape-dynamics/rpops","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/go/github.com/ncsu-landscape-dynamics/rpops","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/go/github.com/ncsu-landscape-dynamics/rpops","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/go/github.com/ncsu-landscape-dynamics/rpops/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2025-10-15T21:30:14.595Z","issues_count":54,"pull_requests_count":101,"avg_time_to_close_issue":15017845.133333333,"avg_time_to_close_pull_request":2330968.5729166665,"issues_closed_count":45,"pull_requests_closed_count":96,"pull_request_authors_count":6,"issue_authors_count":4,"avg_comments_per_issue":0.8703703703703703,"avg_comments_per_pull_request":1.0594059405940595,"merged_pull_requests_count":88,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":19,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":4572416.333333333,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":15,"past_year_pull_request_authors_count":3,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.3157894736842105,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":15,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/issues","maintainers":[{"login":"ChrisJones687","count":107,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ChrisJones687"},{"login":"wenzeslaus","count":17,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/wenzeslaus"}],"active_maintainers":[{"login":"ChrisJones687","count":10,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ChrisJones687"},{"login":"wenzeslaus","count":8,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/wenzeslaus"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Fncsu-landscape-dynamics%2Frpops/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Fncsu-landscape-dynamics%2Frpops/version_numbers","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Fncsu-landscape-dynamics%2Frpops/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Fncsu-landscape-dynamics%2Frpops/related_packages","codemeta_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages/github.com%2Fncsu-landscape-dynamics%2Frpops/codemeta","maintainers":[],"registry":{"name":"proxy.golang.org","url":"https://proxy.golang.org","ecosystem":"go","default":true,"packages_count":2090654,"maintainers_count":0,"namespaces_count":779664,"keywords_count":112728,"github":"golang","metadata":{"funded_packages_count":53440},"icon_url":"https://github.com/golang.png","created_at":"2022-04-04T15:19:22.939Z","updated_at":"2026-04-05T05:09:06.732Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/packages","maintainers_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/maintainers","namespaces_url":"https://packages.ecosyste.ms/api/v1/registries/proxy.golang.org/namespaces"}}],"commits":{"id":1358776,"full_name":"ncsu-landscape-dynamics/rpops","default_branch":"main","total_commits":508,"total_committers":8,"total_bot_commits":0,"total_bot_committers":0,"mean_commits":63.5,"dds":0.06299212598425197,"past_year_total_commits":18,"past_year_total_committers":3,"past_year_total_bot_commits":0,"past_year_total_bot_committers":0,"past_year_mean_commits":6.0,"past_year_dds":0.16666666666666663,"last_synced_at":"2026-04-06T23:10:40.610Z","last_synced_commit":"2592199e1a8a455c562d933e31c1541f2638c3b8","created_at":"2023-09-13T08:49:05.566Z","updated_at":"2026-04-06T23:09:57.841Z","committers":[{"name":"ChrisJones687","email":"cjones1688@gmail.com","login":"ChrisJones687","count":476},{"name":"Chris Michael Jones","email":"cmjone25@wolftech.ad.ncsu.edu","login":null,"count":11},{"name":"Vaclav Petras","email":"wenzeslaus@gmail.com","login":"wenzeslaus","count":8},{"name":"Anna Petrasova","email":"kratochanna@gmail.com","login":"petrasovaa","count":5},{"name":"nfkruska","email":"nfkruska@ncsu.edu","login":"nkruskamp","count":4},{"name":"cyborginhas","email":"67606742+cyborginhas","login":"cyborginhas","count":2},{"name":"malawrim","email":"63056769+malawrim","login":"malawrim","count":1},{"name":"Devon Gaydos","email":"dagaydos@ncsu.edu","login":"dagaydos21","count":1}],"past_year_committers":[{"name":"Chris Jones","email":"cjones1688@gmail.com","login":"ChrisJones687","count":15},{"name":"Vaclav Petras","email":"wenzeslaus@gmail.com","login":"wenzeslaus","count":2},{"name":"cyborginhas","email":"67606742+cyborginhas","login":"cyborginhas","count":1}],"commits_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/commits","host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2026-04-09T00:00:23.197Z","repositories_count":6212577,"commits_count":914700709,"contributors_count":35335598,"owners_count":1143285,"icon_url":"https://github.com/github.png","host_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://commits.ecosyste.ms/api/v1/hosts/GitHub/repositories"}},"issues_stats":{"full_name":"ncsu-landscape-dynamics/rpops","html_url":"https://github.com/ncsu-landscape-dynamics/rpops","last_synced_at":"2026-02-26T04:04:01.090Z","status":"active","issues_count":54,"pull_requests_count":102,"avg_time_to_close_issue":15017845.133333333,"avg_time_to_close_pull_request":2347189.845360825,"issues_closed_count":45,"pull_requests_closed_count":97,"pull_request_authors_count":6,"issue_authors_count":4,"avg_comments_per_issue":0.8703703703703703,"avg_comments_per_pull_request":1.0490196078431373,"merged_pull_requests_count":89,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":0,"past_year_pull_requests_count":8,"past_year_avg_time_to_close_issue":null,"past_year_avg_time_to_close_pull_request":1547081.8333333333,"past_year_issues_closed_count":0,"past_year_pull_requests_closed_count":6,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":0,"past_year_avg_comments_per_issue":null,"past_year_avg_comments_per_pull_request":0.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":6,"created_at":"2023-09-13T08:49:44.410Z","updated_at":"2026-02-26T04:04:01.090Z","repository_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops","issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/ncsu-landscape-dynamics%2Frpops/issues","issue_labels_count":{"enhancement":16,"documentation":8,"bug":8,"help wanted":1},"pull_request_labels_count":{"enhancement":4,"hacktoberfest-accepted":2,"documentation":1},"issue_author_associations_count":{"MEMBER":43,"CONTRIBUTOR":10,"NONE":1},"pull_request_author_associations_count":{"MEMBER":82,"CONTRIBUTOR":14,"NONE":6},"issue_authors":{"ChrisJones687":37,"nkruskamp":10,"wenzeslaus":6,"agimenezromero":1},"pull_request_authors":{"ChrisJones687":71,"wenzeslaus":11,"petrasovaa":8,"cyborginhas":6,"nkruskamp":4,"John-Polo":2},"host":{"name":"GitHub","url":"https://github.com","kind":"github","last_synced_at":"2026-04-06T00:00:09.270Z","repositories_count":14114691,"issues_count":34474565,"pull_requests_count":112578710,"authors_count":11227916,"icon_url":"https://github.com/github.png","host_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories","owners_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/owners","authors_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors"},"past_year_issue_labels_count":{},"past_year_pull_request_labels_count":{},"past_year_issue_author_associations_count":{},"past_year_pull_request_author_associations_count":{"MEMBER":8},"past_year_issue_authors":{},"past_year_pull_request_authors":{"ChrisJones687":8},"maintainers":[{"login":"ChrisJones687","count":108,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ChrisJones687"},{"login":"wenzeslaus","count":17,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/wenzeslaus"}],"active_maintainers":[{"login":"ChrisJones687","count":8,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ChrisJones687"}]},"events":{"total":{"DeleteEvent":13,"PullRequestEvent":17,"IssuesEvent":1,"WatchEvent":3,"IssueCommentEvent":3,"PushEvent":114,"PullRequestReviewCommentEvent":2,"PullRequestReviewEvent":7,"CreateEvent":18},"last_year":{"DeleteEvent":5,"PullRequestEvent":6,"IssuesEvent":1,"WatchEvent":2,"PushEvent":49,"PullRequestReviewEvent":1,"CreateEvent":7}},"keywords":["insect","modeling","pathogen","pathogen-spread","pest","pests","pops","simulation"],"dependencies":[{"ecosystem":"cran","filepath":"DESCRIPTION","sha":null,"kind":"manifest","created_at":"2022-09-13T10:00:51.339Z","updated_at":"2022-09-13T10:00:51.339Z","repository_link":"https://github.com/ncsu-landscape-dynamics/rpops/blob/main/DESCRIPTION","dependencies":[{"id":4711515677,"package_name":"R","ecosystem":"cran","requirements":"\u003e= 3.3.0","direct":true,"kind":"depends","optional":false},{"id":4711515678,"package_name":"raster","ecosystem":"cran","requirements":"\u003e= 3.5","direct":true,"kind":"imports","optional":false},{"id":4711515679,"package_name":"terra","ecosystem":"cran","requirements":"\u003e= 1.5","direct":true,"kind":"imports","optional":false},{"id":4711515680,"package_name":"Rcpp","ecosystem":"cran","requirements":"\u003e= 0.12.19","direct":true,"kind":"imports","optional":false},{"id":4711515681,"package_name":"stats","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515682,"package_name":"foreach","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515683,"package_name":"parallel","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515684,"package_name":"doParallel","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515685,"package_name":"iterators","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515686,"package_name":"landscapemetrics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515687,"package_name":"lubridate","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515688,"package_name":"sp","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515689,"package_name":"utils","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515690,"package_name":"MASS","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515691,"package_name":"methods","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515692,"package_name":"aws.s3","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515693,"package_name":"Metrics","ecosystem":"cran","requirements":"*","direct":true,"kind":"imports","optional":false},{"id":4711515694,"package_name":"testthat","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515695,"package_name":"rgdal","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515696,"package_name":"igraph","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515697,"package_name":"rlist","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515698,"package_name":"knitr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515699,"package_name":"rmarkdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515700,"package_name":"qpdf","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515701,"package_name":"remotes","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515702,"package_name":"rcmdcheck","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515703,"package_name":"markdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515704,"package_name":"covr","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false},{"id":4711515705,"package_name":"pkgdown","ecosystem":"cran","requirements":"*","direct":true,"kind":"suggests","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/R-CMD-check.yaml","sha":null,"kind":"manifest","created_at":"2023-01-30T10:15:43.601Z","updated_at":"2023-01-30T10:15:43.601Z","repository_link":"https://github.com/ncsu-landscape-dynamics/rpops/blob/main/.github/workflows/R-CMD-check.yaml","dependencies":[{"id":7245943344,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943345,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943346,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v1","direct":true,"kind":"composite","optional":false},{"id":7245943347,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/pkgdown.yml","sha":null,"kind":"manifest","created_at":"2023-01-30T10:15:43.766Z","updated_at":"2023-01-30T10:15:43.766Z","repository_link":"https://github.com/ncsu-landscape-dynamics/rpops/blob/main/.github/workflows/pkgdown.yml","dependencies":[{"id":7245943354,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943355,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943356,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943357,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/test-coverage.yaml","sha":null,"kind":"manifest","created_at":"2023-01-30T10:15:43.808Z","updated_at":"2023-01-30T10:15:43.808Z","repository_link":"https://github.com/ncsu-landscape-dynamics/rpops/blob/main/.github/workflows/test-coverage.yaml","dependencies":[{"id":7245943361,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943362,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943363,"package_name":"r-lib/actions/setup-pandoc","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":7245943364,"package_name":"actions/cache","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]},{"ecosystem":"actions","filepath":".github/workflows/lint.yaml","sha":null,"kind":"manifest","created_at":"2023-09-21T19:59:00.606Z","updated_at":"2023-09-21T19:59:00.606Z","repository_link":"https://github.com/ncsu-landscape-dynamics/rpops/blob/main/.github/workflows/lint.yaml","dependencies":[{"id":13857068839,"package_name":"actions/checkout","ecosystem":"actions","requirements":"v3","direct":true,"kind":"composite","optional":false},{"id":13857068840,"package_name":"r-lib/actions/setup-r","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false},{"id":13857068841,"package_name":"r-lib/actions/setup-r-dependencies","ecosystem":"actions","requirements":"v2","direct":true,"kind":"composite","optional":false}]}],"score":null,"created_at":"2023-09-13T08:45:20.110Z","updated_at":"2026-04-12T01:30:23.246Z","avatar_url":"https://github.com/ncsu-landscape-dynamics.png","language":"C++","category":"Consumption","sub_category":"Agriculture and Nutrition","monthly_downloads":0,"total_dependent_repos":0,"total_dependent_packages":0,"readme":"# PoPS (Pest or Pathogen Spread) R Package \u003cimg src=\"man/PoPS_GIF_transparent.gif\" align=\"right\" width=\"15%\" /\u003e\n\n\u003c!-- badges: start --\u003e\n[![R-CMD-check](https://github.com/ncsu-landscape-dynamics/rpops/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/ncsu-landscape-dynamics/rpops/actions/workflows/R-CMD-check.yaml)\n[![lint](https://github.com/ncsu-landscape-dynamics/rpops/actions/workflows/lint.yaml/badge.svg)](https://github.com/ncsu-landscape-dynamics/rpops/actions/workflows/lint.yaml)\n[![codecov](https://codecov.io/gh/ncsu-landscape-dynamics/rpops/branch/main/graph/badge.svg)](https://codecov.io/gh/ncsu-landscape-dynamics/rpops)\n[![DOI](https://zenodo.org/badge/143435350.svg)](https://zenodo.org/badge/latestdoi/143435350)\n  \u003c!-- badges: end --\u003e\n\n## Overview\n\nThe Pest or Pathogen Spread (PoPS) model is an R package for simulating the spread of pests and \npathogens. This package contains multiple functions to calibrate, validate, and forecast pest or \npathogen spread in many locations. The R functions use our PoPS C++ library maintained in \nthe [PoPS Core Repository](https://github.com/ncsu-landscape-dynamics/pops-core). \n\nPoPs is a stochastic spread model of pests and pathogens in forest and agricultural landscapes to \nlearn more visit [popsmodel.org](https://popsmodel.org/). The R package provides an easy way for \nresearchers to calibrate, validate, and test what if scenarios of treatment interventions. The model\nis also available in GRASS GIS you can install and use \n[r.pops.spread](https://github.com/ncsu-landscape-dynamics/r.pops.spread) to run the model in GRASS \nGIS.\n\n## How to use PoPS (Workflow)\n\nPoPS is designed to be user friendly but does require specific data and partnerships\n\n## Installation\nIf you are on Windows, you need to first install\n[Rtools](https://cran.r-project.org/bin/windows/Rtools/) to get a C++ compiler that R can use.\n\n### Version Specific\n\nIf you want to install a specific version or commit just change the version number or the commit\nnumber.\n\n```R\ninstall.packages(\"remotes\")\nremotes::install_github(\"ncsu-landscape-dynamics/rpops\", ref = \"v2.0.0\")\nlibrary(PoPS)\n\n```\n### Development Version\n\n```R\ninstall.packages(\"remotes\")\nremotes::install_github(\"ncsu-landscape-dynamics/rpops\")\nlibrary(PoPS)\n\n```\n## Features\nthe PoPS package in R is built on top of PoPS Core C++ library includes:\n\n* Susceptible-infected (`SI`) and susceptible-exposed-infected (`SEI`) model types (`model_type`, `latency_period`).\n* Host mortality tracking (`mortality_rate`, `mortality_time_lag`, `mortality`).\n* Host removal and pesticide application treatments (`treatments`, `treatment_date`, `pesticide_duration`).\n* Host resistance based on pesticide application treatments (`pesticide_duration` \u003e 0).\n* Treatments applied only to a ratio of hosts (`treatment_application`).\n* Yearly pest removal based on lethal temperature (`lethal_temperature`, `lethal_month`).\n* Two different dispersal kernels (`natural_dispersal_kernel`, `anthropogenic_dispersal_kernel`).\n* Cauchy, Exponential, Uniform, Power-law, Deterministic neighbor, Hyperbolic-Secant, Gamma, Weibull, Normal, and Logistic radial dispersal kernels use Von Mises distribution.\n* Seasonal spread (`seasonality` in months).\n* Host movement for animals moving from farm to farm or plants via nursery trade (`use_movements`, `movements_file`).\n* Reduced stochasticity options (`generate_stochasticity`, `establishment_stochasticity`, `movement_stochasticity`) and deterministic versions of kernels (`deterministic`) other required parameters if reducing stochasticity are (`dispersal_percentage`, `establishment_probability`).\n* Spread rate measurement in 4 cardinal directions (`west_rate`, `east_rate`, `south_rate`, `north_rate`) when (`use_spreadrates`) is true.\n* Distance to quarantine in 4 cardinal directions (`north_distance_to_quarantine`, `south_distance_to_quarantine`, `east_distance_to_quarantine`, `west_distance_to_quarantine`) when (`use_quarantine`) is true and (`quarantine_areas_file`) is provided.\n* Probability of quarantine escape (`escape_probability`).\n* Overpopulation function (individuals in areas of high population leave the area and disperse longer distances on average) (`use_overpopulation`, `overpopulation_percentage`, `leaving_percentage`, `leaving_scale_coefficient`).\n* Flexible output frequency with n number of days, weeks, months, or years as options (`output_frequency`, `output_frequency_n`).\n\n### Functions in rpops\n* `calibrate:` Calibration of the model parameters using either MCMC (markov chain monte carlo) or ABC (approximate bayesian computation). \n* `validate:` Validation of the model using quantiy, allocation, and configuration disagreement.\n* `pops_multirun:` Parallel execution of multiple stochastic runs (`number_of_cores` used to set cores used if left NULL defaults to using n - 1 cores on the machine). Outputs statistics of infected/infested hosts across multiple runs (`simulation_mean`,  `single_run`,  `simulation_sd`, `simulation_min`, `simulation_max`), current state using the median (`infected`,  `exposed`, and `susceptible`), average and standard deviations whole area statistics (`number_infecteds`, `infected_areas`), and probability of infection (`probability`) which is the percent of model runs that a cell has at least one infestation/infection.\n* `pops:` Runs a single stochastic run of the model. This function is primarily used for automated testing of model functionality.\n\n## How to cite\n\nIf you use this software or code, please cite the following papers:\n\n* Jones, C., Jones, S., Petrasova, A., Petras, V., Gaydos, D., \n  Skrip, M., Takeuchi, Y., Bigsby, K., and Meentemeyer, R., 2021.\n  Iteratively forecasting biological invasions with PoPS and a little help from \n  our friends.\n  *Frontiers in Ecology and the Environment* \n  [DOI: 10.1002/fee.2357](https://doi.org/10.1002/fee.2357)\n\nIn case you are using the automatic management feature in rpops or the\nsteering version of r.pops.spread (from the branch steering), please\nalso cite:\n\n* Petrasova, A., Gaydos, D.A., Petras, V., Jones, C.M., Mitasova, H. and\n  Meentemeyer, R.K., 2020.\n  Geospatial simulation steering for adaptive management.\n  *Environmental Modelling \u0026 Software* 133: 104801.\n  [DOI: 10.1016/j.envsoft.2020.104801](https://doi.org/10.1016/j.envsoft.2020.104801)\n\nIn addition to citing the above paper, we also encourage you to\nreference, link, and/or acknowledge specific version of the software\nyou are using for example:\n\n* *We have used rpops R package version 1.0.0 from\n  \u003chttps://github.com/ncsu-landscape-dynamics/rpops\u003e*.\n\n## Contributing\n\nPlease see the [pops-core](https://github.com/ncsu-landscape-dynamics/pops-core#readme) repository for contributing best practices and release policies. Other than that, just open pull requests against this repo. We suggest following the [Style Guide from Hadley](http://adv-r.had.co.nz/Style.html) for R code.\n\n## Authors and contributors\n\n### Authors\n\n_(alphabetical order)_\n\n* Chris Jones\n* Vaclav Petras\n* Anna Petrasova\n\n### Contributors\n\n_(alphabetical order)_\n\n* Zexi Chen\n* Devon Gaydos\n* Margaret Lawrimore\n* Nick Kruskamp\n* Francesco Tonini\n\nSee Git commit history, GitHub insights, or CHANGELOG.md file for details about\ncontributions.\n\n## License\n\nPermission to use, copy, modify, and distribute this software and its documentation\nunder the terms of the GNU General Public License version 2 or higher is hereby\ngranted. No representations are made about the suitability of this software for any\npurpose. It is provided \"as is\" without express or implied warranty.\nSee the GNU General Public License for more details.\n","funding_links":[],"readme_doi_urls":["https://doi.org/10.1002/fee.2357","https://doi.org/10.1016/j.envsoft.2020.104801"],"works":{"https://doi.org/10.1002/fee.2357":{"id":"https://openalex.org/W3170655848","doi":"https://doi.org/10.1002/fee.2357","title":"Iteratively forecasting biological invasions with PoPS and a little help from our friends","display_name":"Iteratively forecasting biological invasions with PoPS and a little help from our friends","publication_year":2021,"publication_date":"2021-06-03","ids":{"openalex":"https://openalex.org/W3170655848","doi":"https://doi.org/10.1002/fee.2357","mag":"3170655848","pmid":"https://pubmed.ncbi.nlm.nih.gov/34588928","pmcid":"https://www.ncbi.nlm.nih.gov/pmc/articles/8453564"},"language":"en","primary_location":{"is_oa":false,"landing_page_url":"https://doi.org/10.1002/fee.2357","pdf_url":null,"source":{"id":"https://openalex.org/S144797041","display_name":"Frontiers in Ecology and the Environment","issn_l":"1540-9295","issn":["1540-9309","1540-9295"],"is_oa":false,"is_in_doaj":false,"host_organization":"https://openalex.org/P4310320503","host_organization_name":"Wiley-Blackwell","host_organization_lineage":["https://openalex.org/P4310320503","https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley-Blackwell","Wiley"],"type":"journal"},"license":null,"version":null,"is_accepted":false,"is_published":false},"type":"article","type_crossref":"journal-article","open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://europepmc.org/articles/pmc8453564?pdf=render","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000223347","display_name":"Chris Jones","orcid":"https://orcid.org/0000-0002-0229-2970"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Chris M Jones","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003313372","display_name":"Shannon Jones","orcid":null},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shannon Jones","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043999737","display_name":"Anna Petrášová","orcid":"https://orcid.org/0000-0002-5120-5538"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna Petrasova","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046955249","display_name":"Vaclav Petras","orcid":"https://orcid.org/0000-0001-5566-9236"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vaclav Petras","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056692860","display_name":"Devon A. Gaydos","orcid":null},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]},{"id":"https://openalex.org/I1288380561","display_name":"Animal and Plant Health Inspection Service","ror":"https://ror.org/0599wfz09","country_code":"US","type":"government","lineage":["https://openalex.org/I1288380561","https://openalex.org/I1336096307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Devon Gaydos","raw_affiliation_string":"Animal and Plant Health Inspection Service (APHIS), US Department of Agriculture (USDA), Riverdale, MD; Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Animal and Plant Health Inspection Service (APHIS), US Department of Agriculture (USDA), Riverdale, MD","Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073191053","display_name":"Megan M. Skrip","orcid":"https://orcid.org/0000-0001-7972-7330"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Megan M Skrip","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051795751","display_name":"Yu Takeúchi","orcid":"https://orcid.org/0000-0003-4734-9608"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yu Takeuchi","raw_affiliation_string":"Center for Integrated Pest Management, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Integrated Pest Management, North Carolina State University, Raleigh, NC"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027781175","display_name":"Kevin M. Bigsby","orcid":null},"institutions":[{"id":"https://openalex.org/I1312222531","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044","country_code":"US","type":"government","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1288380561","display_name":"Animal and Plant Health Inspection Service","ror":"https://ror.org/0599wfz09","country_code":"US","type":"government","lineage":["https://openalex.org/I1288380561","https://openalex.org/I1336096307"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin Bigsby","raw_affiliation_string":"APHIS, USDA, Raleigh, NC","raw_affiliation_strings":["APHIS, USDA, Raleigh, NC"]},{"author_position":"last","author":{"id":"https://openalex.org/A5011456727","display_name":"Ross K. Meentemeyer","orcid":"https://orcid.org/0000-0002-1247-6212"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ross K Meentemeyer","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC"]}],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5000223347"],"corresponding_institution_ids":["https://openalex.org/I137902535"],"apc_list":{"value":3600,"currency":"USD","value_usd":3600,"provenance":"doaj"},"apc_paid":{"value":3600,"currency":"USD","value_usd":3600,"provenance":"doaj"},"has_fulltext":true,"fulltext_origin":"pdf","cited_by_count":18,"cited_by_percentile_year":{"min":96,"max":97},"biblio":{"volume":"19","issue":"7","first_page":"411","last_page":"418"},"is_retracted":false,"is_paratext":false,"keywords":[{"keyword":"biological invasions","score":0.7494},{"keyword":"pops","score":0.3825},{"keyword":"forecasting","score":0.3675}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.61280894},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.533275},{"id":"https://openalex.org/C107826830","wikidata":"https://www.wikidata.org/wiki/Q929380","display_name":"Environmental resource management","level":1,"score":0.4481885},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.36233282},{"id":"https://openalex.org/C42475967","wikidata":"https://www.wikidata.org/wiki/Q194292","display_name":"Operations research","level":1,"score":0.323354},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.20051593},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10891464},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08825213},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"is_oa":false,"landing_page_url":"https://doi.org/10.1002/fee.2357","pdf_url":null,"source":{"id":"https://openalex.org/S144797041","display_name":"Frontiers in Ecology and the Environment","issn_l":"1540-9295","issn":["1540-9309","1540-9295"],"is_oa":false,"is_in_doaj":false,"host_organization":"https://openalex.org/P4310320503","host_organization_name":"Wiley-Blackwell","host_organization_lineage":["https://openalex.org/P4310320503","https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley-Blackwell","Wiley"],"type":"journal"},"license":null,"version":null,"is_accepted":false,"is_published":false},{"is_oa":true,"landing_page_url":"https://europepmc.org/articles/pmc8453564","pdf_url":"https://europepmc.org/articles/pmc8453564?pdf=render","source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":["European Bioinformatics Institute"],"type":"repository"},"license":"cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},{"is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8453564","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":["National Institutes of Health"],"type":"repository"},"license":null,"version":"publishedVersion","is_accepted":true,"is_published":true}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://europepmc.org/articles/pmc8453564","pdf_url":"https://europepmc.org/articles/pmc8453564?pdf=render","source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":["European Bioinformatics Institute"],"type":"repository"},"license":"cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.25},{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.19},{"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production","score":0.16},{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.1}],"grants":[{"funder":"https://openalex.org/F4320309327","funder_display_name":"Google","award_id":null},{"funder":"https://openalex.org/F4320309480","funder_display_name":"Nvidia","award_id":null},{"funder":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health","award_id":"#2015‐67013‐23818"},{"funder":"https://openalex.org/F4320332778","funder_display_name":"Animal and Plant Health Inspection Service","award_id":null}],"referenced_works_count":29,"referenced_works":["https://openalex.org/W1966489326","https://openalex.org/W1991183991","https://openalex.org/W2022718332","https://openalex.org/W2064374909","https://openalex.org/W2114548855","https://openalex.org/W2120555423","https://openalex.org/W2127470579","https://openalex.org/W2140460700","https://openalex.org/W2167794310","https://openalex.org/W2169349514","https://openalex.org/W2178014801","https://openalex.org/W2219940921","https://openalex.org/W2337926544","https://openalex.org/W2472293114","https://openalex.org/W2543180075","https://openalex.org/W2592382100","https://openalex.org/W2749844057","https://openalex.org/W2754710967","https://openalex.org/W2756692527","https://openalex.org/W2786425804","https://openalex.org/W2795786882","https://openalex.org/W2912586799","https://openalex.org/W2913500366","https://openalex.org/W2945365129","https://openalex.org/W2974224803","https://openalex.org/W2975024646","https://openalex.org/W3005925686","https://openalex.org/W3047686930","https://openalex.org/W4230543203"],"related_works":["https://openalex.org/W1566021915","https://openalex.org/W2391561939","https://openalex.org/W2387142106","https://openalex.org/W2902869647","https://openalex.org/W2914402446","https://openalex.org/W2366541088","https://openalex.org/W2755329878","https://openalex.org/W2910251803","https://openalex.org/W2377155546","https://openalex.org/W2382990816"],"ngrams_url":"https://api.openalex.org/works/W3170655848/ngrams","abstract_inverted_index":{"Ecological":[0],"forecasting":[1,25,133],"has":[2,136],"vast":[3],"potential":[4],"to":[5,45,68,104,119],"support":[6],"environmental":[7],"decision":[8,31,145],"making":[9,146],"with":[10],"repeated,":[11],"testable":[12],"predictions":[13],"across":[14],"management‐relevant":[15],"timescales":[16],"and":[17,48,141,150],"locations.":[18],"Yet":[19],"resource":[20],"managers":[21],"rarely":[22],"use":[23,151],"co‐designed":[24],"systems":[26],"or":[27,66,84],"embed":[28],"them":[29],"in":[30],"making.":[32],"Although":[33],"prediction":[34],"of":[35,56,71,96,130],"planned":[36],"management":[37,72,153],"outcomes":[38],"is":[39,126],"particularly":[40],"important":[41],"for":[42,91,143],"biological":[43,97],"invasions":[44],"optimize":[46],"when":[47],"where":[49],"resources":[50],"should":[51],"be":[52],"allocated,":[53],"spatial–temporal":[54],"models":[55],"spread":[57],"typically":[58],"have":[59],"not":[60],"been":[61,137],"openly":[62],"shared,":[63],"iteratively":[64],"updated,":[65],"interactive":[67],"facilitate":[69],"exploration":[70],"actions.":[73],"We":[74],"describe":[75],"a":[76,127],"species‐agnostic,":[77],"open‐source":[78],"framework":[79,125],"–":[80,90],"called":[81],"the":[82,116],"Pest":[83],"Pathogen":[85],"Spread":[86],"(PoPS)":[87],"Forecasting":[88],"Platform":[89],"co‐designing":[92],"near‐term":[93],"iterative":[94,107],"forecasts":[95],"invasions.":[98],"Two":[99],"case":[100],"studies":[101],"are":[102],"presented":[103],"demonstrate":[105],"that":[106,135],"calibration":[108],"yields":[109],"higher":[110],"forecast":[111],"skill":[112],"than":[113],"using":[114],"only":[115],"earliest‐available":[117],"data":[118],"predict":[120],"future":[121],"spread.":[122],"The":[123],"PoPS":[124],"primary":[128],"example":[129],"an":[131],"ecological":[132],"system":[134],"both":[138],"scientifically":[139],"improved":[140],"optimized":[142],"real‐world":[144],"through":[147],"sustained":[148],"participation":[149],"by":[152],"stakeholders.":[154]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W3170655848","counts_by_year":[{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":4}],"updated_date":"2023-12-12T14:20:58.982422","created_date":"2021-06-22"},"https://doi.org/10.1016/j.envsoft.2020.104801":{"id":"https://openalex.org/W3047686930","doi":"https://doi.org/10.1016/j.envsoft.2020.104801","title":"Geospatial simulation steering for adaptive management","display_name":"Geospatial simulation steering for adaptive management","publication_year":2020,"publication_date":"2020-11-01","ids":{"openalex":"https://openalex.org/W3047686930","doi":"https://doi.org/10.1016/j.envsoft.2020.104801","mag":"3047686930"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.envsoft.2020.104801","pdf_url":"https://www.sciencedirect.com/science/article/am/pii/S1364815220306873","source":{"id":"https://openalex.org/S113611870","display_name":"Environmental Modelling and Software","issn_l":"1364-8152","issn":["1364-8152","1873-6726"],"is_oa":false,"is_in_doaj":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"publisher-specific-oa","version":"acceptedVersion","is_accepted":true,"is_published":false},"type":"article","type_crossref":"journal-article","open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://www.sciencedirect.com/science/article/am/pii/S1364815220306873","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043999737","display_name":"Anna Petrášová","orcid":"https://orcid.org/0000-0002-5120-5538"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Anna Petrasova","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056692860","display_name":"Devon A. Gaydos","orcid":null},"institutions":[{"id":"https://openalex.org/I1288380561","display_name":"Animal and Plant Health Inspection Service","ror":"https://ror.org/0599wfz09","country_code":"US","type":"government","lineage":["https://openalex.org/I1288380561","https://openalex.org/I1336096307"]},{"id":"https://openalex.org/I1336096307","display_name":"United States Department of Agriculture","ror":"https://ror.org/01na82s61","country_code":"US","type":"government","lineage":["https://openalex.org/I1336096307","https://openalex.org/I2800421839"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Devon A. Gaydos","raw_affiliation_string":"United States Department of Agriculture (USDA), Animal and Plant Health Inspection Service (APHIS), Plant Protection and Quarantine (PPQ), Science and Technology (S\u0026T), 4700 River Road, Riverdale, MD, 20737, USA","raw_affiliation_strings":["United States Department of Agriculture (USDA), Animal and Plant Health Inspection Service (APHIS), Plant Protection and Quarantine (PPQ), Science and Technology (S\u0026T), 4700 River Road, Riverdale, MD, 20737, USA"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046955249","display_name":"Vaclav Petras","orcid":"https://orcid.org/0000-0001-5566-9236"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vaclav Petras","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000223347","display_name":"Chris Jones","orcid":"https://orcid.org/0000-0002-0229-2970"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris M. Jones","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA"]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072584079","display_name":"Helena Mitášová","orcid":"https://orcid.org/0000-0002-6906-3398"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Helena Mitasova","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA"]},{"author_position":"last","author":{"id":"https://openalex.org/A5011456727","display_name":"Ross K. Meentemeyer","orcid":"https://orcid.org/0000-0002-1247-6212"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535","https://openalex.org/I4210158053"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ross K. Meentemeyer","raw_affiliation_string":"Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA","raw_affiliation_strings":["Center for Geospatial Analytics, North Carolina State University, Raleigh, NC, 27695, USA"]}],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5043999737"],"corresponding_institution_ids":["https://openalex.org/I137902535"],"apc_list":{"value":3400,"currency":"USD","value_usd":3400,"provenance":"doaj"},"apc_paid":{"value":3400,"currency":"USD","value_usd":3400,"provenance":"doaj"},"has_fulltext":false,"cited_by_count":6,"cited_by_percentile_year":{"min":86,"max":87},"biblio":{"volume":"133","issue":null,"first_page":"104801","last_page":"104801"},"is_retracted":false,"is_paratext":false,"keywords":[{"keyword":"geospatial simulation steering","score":0.7398},{"keyword":"adaptive management","score":0.5828}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.63523304},{"id":"https://openalex.org/C2775917145","wikidata":"https://www.wikidata.org/wiki/Q4680750","display_name":"Adaptive management","level":2,"score":0.58886904},{"id":"https://openalex.org/C9770341","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Geospatial analysis","level":2,"score":0.56889486},{"id":"https://openalex.org/C84525736","wikidata":"https://www.wikidata.org/wiki/Q831366","display_name":"Decision tree","level":2,"score":0.45026731},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.40223825},{"id":"https://openalex.org/C195094911","wikidata":"https://www.wikidata.org/wiki/Q14167904","display_name":"Process management","level":1,"score":0.34308615},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.33898324},{"id":"https://openalex.org/C107826830","wikidata":"https://www.wikidata.org/wiki/Q929380","display_name":"Environmental resource management","level":1,"score":0.18994686},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.18791905},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16693172},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.0},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.envsoft.2020.104801","pdf_url":"https://www.sciencedirect.com/science/article/am/pii/S1364815220306873","source":{"id":"https://openalex.org/S113611870","display_name":"Environmental Modelling and Software","issn_l":"1364-8152","issn":["1364-8152","1873-6726"],"is_oa":false,"is_in_doaj":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"publisher-specific-oa","version":"acceptedVersion","is_accepted":true,"is_published":false}],"best_oa_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.envsoft.2020.104801","pdf_url":"https://www.sciencedirect.com/science/article/am/pii/S1364815220306873","source":{"id":"https://openalex.org/S113611870","display_name":"Environmental Modelling and Software","issn_l":"1364-8152","issn":["1364-8152","1873-6726"],"is_oa":false,"is_in_doaj":false,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"publisher-specific-oa","version":"acceptedVersion","is_accepted":true,"is_published":false},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.31},{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.3}],"grants":[{"funder":"https://openalex.org/F4320332778","funder_display_name":"Animal and Plant Health Inspection Service","award_id":null}],"referenced_works_count":36,"referenced_works":["https://openalex.org/W564633322","https://openalex.org/W1550828256","https://openalex.org/W1964149705","https://openalex.org/W1966489326","https://openalex.org/W1974405207","https://openalex.org/W1991183991","https://openalex.org/W2007698559","https://openalex.org/W2007959519","https://openalex.org/W2025924400","https://openalex.org/W2034309166","https://openalex.org/W2037147154","https://openalex.org/W2041202986","https://openalex.org/W2069807166","https://openalex.org/W2080569794","https://openalex.org/W2084186340","https://openalex.org/W2085846955","https://openalex.org/W2101950132","https://openalex.org/W2124351239","https://openalex.org/W2127470579","https://openalex.org/W2147945290","https://openalex.org/W2158649458","https://openalex.org/W2169867310","https://openalex.org/W2181961168","https://openalex.org/W2219940921","https://openalex.org/W2294831722","https://openalex.org/W2337926544","https://openalex.org/W2592382100","https://openalex.org/W2625430891","https://openalex.org/W2652300516","https://openalex.org/W2754485601","https://openalex.org/W2775452065","https://openalex.org/W2913124758","https://openalex.org/W2916513887","https://openalex.org/W2921798481","https://openalex.org/W2945365129","https://openalex.org/W3027392806"],"related_works":["https://openalex.org/W4367313141","https://openalex.org/W2733999579","https://openalex.org/W2910751785","https://openalex.org/W2110217573","https://openalex.org/W4366547507","https://openalex.org/W4283374591","https://openalex.org/W2004086023","https://openalex.org/W2094757258","https://openalex.org/W1595427329","https://openalex.org/W1848641581"],"ngrams_url":"https://api.openalex.org/works/W3047686930/ngrams","abstract_inverted_index":{"Spatio-temporal":[0,112],"simulations":[1,32,50,140],"are":[2],"becoming":[3],"essential":[4],"tools":[5],"for":[6,33,141],"decision":[7,18],"makers":[8],"when":[9],"forecasting":[10],"future":[11],"conditions":[12],"and":[13,35,51,65,101,133],"evaluating":[14],"effectiveness":[15],"of":[16,22,29,59,88,138],"alternative":[17],"scenarios.":[19],"However,":[20],"lack":[21],"interactive":[23,139],"steering":[24,47,113],"capabilities":[25],"limits":[26],"the":[27,57,86,109,136],"value":[28],"advanced":[30],"stochastic":[31],"research":[34],"practice.":[36],"To":[37],"address":[38],"this":[39],"gap":[40],"we":[41],"identified":[42],"conceptual":[43],"challenges":[44],"associated":[45],"with":[46],"stochastic,":[48],"spatio-temporal":[49],"developed":[52],"solutions":[53],"that":[54],"better":[55],"represent":[56],"realities":[58],"decision-making":[60],"by":[61],"allowing":[62],"both":[63],"reactive":[64],"proactive,":[66],"spatially-explicit":[67],"interventions.":[68],"We":[69],"present":[70],"our":[71],"approach,":[72],"in":[73,81,92],"a":[74,89],"participatory":[75],"modeling":[76],"case":[77],"study":[78],"engaging":[79],"stakeholders":[80,104],"developing":[82],"strategies":[83],"to":[84,116,131],"contain":[85],"spread":[87],"tree":[90],"disease":[91],"Oregon,":[93],"USA.":[94],"Using":[95],"intuitive":[96],"interfaces,":[97],"implemented":[98],"through":[99],"web-based":[100],"tangible":[102],"platforms,":[103],"explored":[105],"management":[106,120,125],"options":[107],"as":[108],"simulation":[110],"progressed.":[111],"allowed":[114],"them":[115],"combine":[117],"currently":[118],"used":[119],"practices":[121],"into":[122],"novel":[123],"adaptive":[124],"strategies,":[126],"which":[127],"were":[128],"previously":[129],"difficult":[130],"test":[132],"assess,":[134],"demonstrating":[135],"utility":[137],"decision-making.":[142]},"cited_by_api_url":"https://api.openalex.org/works?filter=cites:W3047686930","counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3}],"updated_date":"2023-12-14T02:01:26.275485","created_date":"2020-08-13"}},"citation_counts":{"https://doi.org/10.1002/fee.2357":16,"https://doi.org/10.1016/j.envsoft.2020.104801":6},"total_citations":22,"keywords_from_contributors":["course-materials","grass-gis","tangible-user-interfaces","teaching-materials"],"project_url":"https://ost.ecosyste.ms/api/v1/projects/46166","html_url":"https://ost.ecosyste.ms/projects/46166"}