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and Nutrition","monthly_downloads":0,"total_dependent_repos":0,"total_dependent_packages":0,"readme":"\u003c!-- badges: start --\u003e\n[![build](https://github.com/JGCRI/osiris/workflows/build/badge.svg)](https://github.com/JGCRI/osiris/workflows/build/badge.svg?branch=main)\n[![test_coverage](https://github.com/JGCRI/osiris/actions/workflows/test_coverage.yml/badge.svg?branch=main)](https://github.com/JGCRI/osiris/actions/workflows/test_coverage.yml)\n[![codecov](https://codecov.io/gh/JGCRI/osiris/branch/main/graph/badge.svg?token=XQ913U4IYM)](https://codecov.io/gh/JGCRI/osiris) \n[![docs](https://github.com/JGCRI/osiris/actions/workflows/docs.yaml/badge.svg?branch=main)](https://github.com/JGCRI/osiris/actions/workflows/docs.yaml)\n[![DOI](https://joss.theoj.org/papers/10.21105/joss.05226/status.svg)](https://doi.org/10.21105/joss.05226)\n\u003c!-- badges: end --\u003e\n\n\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n# \u003ca name=\"Introduction\"\u003e\u003c/a\u003eIntroduction\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n\n`osiris` is R package to process climate impacts on agricultural yields for the Global Change Analysis Model (GCAM).\n\n\u003cbr\u003e\n\n\u003cp align=\"center\"\u003e\n\u003ca href=\"https://jgcri.github.io/osiris/articles/vignette.html\" target=\"_blank\"\u003e\u003cimg src=\"https://github.com/JGCRI/jgcricolors/blob/main/vignettes/button_user_guide.PNG?raw=true\" alt=\"https://jgcri.github.io/osiris/articles/vignette.html\" height=\"60\"/\u003e\u003c/a\u003e \n\u003c/p\u003e\n\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n# \u003ca name=\"Citation\"\u003e\u003c/a\u003eCitation\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\nAhsan, H., Khan, Z., Snyder, A., Kyle, P., \u0026 Vernon, C.R. (2023). osiris: An R package to process climate impacts on agricultural yields for the Global Change Analysis Model. Journal of Open Source Software, 8(85), 5226. https://doi.org/10.21105/joss.05226 \n\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n# \u003ca name=\"InstallGuide\"\u003e\u003c/a\u003eInstallation Guide\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n\n1. Download and install:\n    - R (https://www.r-project.org/)\n    - R studio (https://www.rstudio.com/) (Optional)\n    \n    \n2. In R or R studio:\n\n```r\ninstall.packages(\"devtools\")\ndevtools::install_github(\"JGCRI/osiris\")\n```\n\nAdditional steps for UBUNTU from a terminal\n```\nsudo add-apt-repository ppa:ubuntugis/ppa\nsudo apt-get update\nsudo apt-get install -y libcurl4-openssl-dev libssl-dev libxml2-dev libudunits2-dev libproj-dev libavfilter-dev\n```\n\nAdditional steps for MACOSX from a terminal\n```\nbrew install pkg-config\n```\n\n\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n# \u003ca name=\"Publications\"\u003e\u003c/a\u003eRelated Publications\n\u003c!-- ------------------------\u003e\n\u003c!-- ------------------------\u003e\n\n- Müller, C., Franke, J., Jägermeyr, J., Ruane, A.C., Elliott, J., Moyer, E., Heinke, J., Falloon, P.D., Folberth, C., Francois, L. and Hank, T., 2021. Exploring uncertainties in global crop yield projections in a large ensemble of crop models and CMIP5 and CMIP6 climate scenarios. Environmental Research Letters, 16(3), p.034040. https://doi.org/10.1088/1748-9326/abd8fc\n- Franke, J.A., Müller, C., Elliott, J., Ruane, A.C., Jägermeyr, J., Snyder, A., Dury, M., Falloon, P.D., Folberth, C., François, L. and Hank, T., 2020. The GGCMI Phase 2 emulators: global gridded crop model responses to changes in CO 2, temperature, water, and nitrogen (version 1.0). Geoscientific Model Development, 13(9), pp.3995-4018. https://doi.org/10.5194/gmd-13-3995-2020\n- Snyder, A., Calvin, K.V., Phillips, M. and Ruane, A.C., 2019. A crop yield change emulator for use in GCAM and similar models: Persephone v1. 0. Geoscientific Model Development, 12(4), pp.1319-1350. https://doi.org/10.5194/gmd-12-1319-2019\n\n  \n","funding_links":[],"readme_doi_urls":["https://doi.org/10.21105/joss.05226","https://doi.org/10.1088/1748-9326/abd8fc","https://doi.org/10.5194/gmd-13-3995-2020","https://doi.org/10.5194/gmd-12-1319-2019"],"works":{"https://doi.org/10.21105/joss.05226":{"id":"https://openalex.org/W4378070248","doi":"https://doi.org/10.21105/joss.05226","title":"osiris: An R package to process climate impacts on agricultural yields for the Global Change Analysis Model","display_name":"osiris: An R package to process climate impacts on agricultural yields for the Global Change Analysis Model","publication_year":2023,"publication_date":"2023-05-24","ids":{"openalex":"https://openalex.org/W4378070248","doi":"https://doi.org/10.21105/joss.05226"},"language":"en","primary_location":{"is_oa":true,"landing_page_url":"https://doi.org/10.21105/joss.05226","pdf_url":"https://joss.theoj.org/papers/10.21105/joss.05226.pdf","source":{"id":"https://openalex.org/S4210214273","display_name":"Journal of open source software","issn_l":"2475-9066","issn":["2475-9066"],"is_oa":true,"is_in_doaj":true,"host_organization":"https://openalex.org/P4310315853","host_organization_name":"Open Journals","host_organization_lineage":["https://openalex.org/P4310315853"],"host_organization_lineage_names":["Open Journals"],"type":"journal"},"license":"cc-by","version":"publishedVersion","is_accepted":true,"is_published":true},"type":"article","type_crossref":"journal-article","open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://joss.theoj.org/papers/10.21105/joss.05226.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013213460","display_name":"Hamza Ahsan","orcid":"https://orcid.org/0000-0003-1631-1789"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hamza Ahsan","raw_affiliation_string":"","raw_affiliation_strings":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084699340","display_name":"Zarrar Khan","orcid":"https://orcid.org/0000-0002-8147-8553"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Zarrar Khan","raw_affiliation_string":"","raw_affiliation_strings":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039306343","display_name":"Abigail Snyder","orcid":"https://orcid.org/0000-0002-9034-9948"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Abigail Snyder","raw_affiliation_string":"","raw_affiliation_strings":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041270866","display_name":"Page Kyle","orcid":"https://orcid.org/0000-0002-1257-8358"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Page Kyle","raw_affiliation_string":"","raw_affiliation_strings":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5006939159","display_name":"Chris R. 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